BAC Information

Click to search

BAC

Clone NameB6Ng01-094G19
Chromosome14 (Build37)
Map Location 98,306,454 - 98,441,533
singlet/doubletdoublet
Overlap geneDach1
Upstream geneLOC668654, EG668659
Downstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G19.bB6Ng01-094G19.g
ACCDH905651DH905652
length1,1201,116
definitionDH905651|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G19, 5' end.DH905652|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,440,395 - 98,441,533)(98,306,454 - 98,307,591)
sequence
gaattccatttatattacagtttaatttagttagtcaaacacatttgtta
aacatgattatggctgagccttgaactagacatggctgacagtggggcag
agaggaatctcctgcctggcagggatgcacatggctttaggagcatgagg
gtggatgctatacatgacaaaatgactgaagatcaaataaaagaatatac
aatacattgtttatagaaccataaacatataaacatttgactcaggcatt
gtcctggagggcattatttattcctagcctgactgtgtactaagtactgc
tacactgagtttcctgatgaagactctgttccatttttaagttaggacat
tgccattcactggcccatgtgtaaaggccatttctattagaccctattgc
tggttatttgtcaatgttcaaaattcattgttttagagatgatgtctctg
ccctaccaagctaaaggtaccattgtagaattctgttctctaattttgtc
tgtctgagcaccatcttcctgtaccacaaaataaactctcaattgctgac
gaaagtaccagtaaacaaagacaaatgtacaactgcaagtgggaaatctt
taatgaaacttaatgagacttttctgaaagagcacttttaaaatacttga
tgctatgtttcatagctgtctcaacgacactgagaatgccactctaaatg
ctttgatttctggaacaagtttcttatgccttttttattcgtgtatgaag
atttagtatgaatacaaaagtagttagatttatgagaatataggggttca
atttggggaaagaaaactaacgaagaggcttgtgatgccaaagaaagaca
tgtcttctgtgatgttccttaaacagtaaactcacgatgaaatgagtcat
tctggtggtgggtcaaaggcacatttcaaaggtggcctacaaaagcttca
ttatttctattctaacaatcatagagaggttcatccacacagagcagcac
tctttaagtcaaaatactcatatttagtttgaaacttaatgtcaattata
tttttgtagagtctagtgattgttgaaaacaagaactcgaaaaggtgtat
tattaagtatacctcaatca
gaattcacgcaactgaggaaggctgagtaggaaaagttatctttccgtag
aagaacagaacaattatttatccaataccagatagatggttagcactgaa
aatacaagaattacagtattaagactaattaggttatatttagaaatata
tatgcacacacacacattcacatgcatacatacatacatacatacataca
tacataagtcatactatcatactgtcatactgttatacatacataataag
agtcaatgaaaaaccagtttatgaatttgaaagagagcaaataagggtgt
ttggaaggttctagggaggacaaggacagaagaaatggtcatacaattat
gatgttaaaaaggctcatatcaaagtttatcaactacaaatagagttaaa
ttattatagtatccaatgtctttattttagatggcttttgaagtatttgt
atatttattataagaggtgagtatgaagttttacaataaaaatatgaaag
aatgcaaggacacatttatgtattaaatgtagtatagtagagttgcatcc
ataatcaagccaggttttcagaattcatgcatcttgatattgatttcttc
tttttaatttttttcttaaaattagaaaaaatgttgtttgataatcaagc
atgcgtatgatgtcttgacaaaacctacattcgttttcttccactccaat
ttttctctgttcctctaaaattttcctaccaactttatgtgtttatatgt
ttaaaccaattgagttgacttagtgctaccaatttgtgactgggtgcagg
tagggacaatggataaaacatagagatcctctcagcgaccaaatctctga
aaaaaaaaactgtatattcttccatcaactctgatcgtcagtaaaacgag
ctccttatttagactgaaaggcccctcaggatccagagagttacagacta
ggataactggctaagctttagaaatattcatcatagtgatatttattact
tataaagaaatattatatgtactggagaaatatggtgttttatggaatag
gatttctagtaccgatattctcctccagcatgacatccatgttcccaata
cttttttaatttatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98440395_98441533
seq2: B6Ng01-094G19.b_45_1164 (reverse)

seq1  TGATTGAGGTCATCACTTAATATATCTACA-CTTCTCGGGGTCTTGTTTT  49
      |||||||||| || ||||||||    |||| ||| ||| | |||||||||
seq2  TGATTGAGGT-AT-ACTTAATA---ATACACCTTTTCGAGTTCTTGTTTT  45

seq1  CAACAATCAACTAGACTCTACAAAAATATAATTGACAATTAAGTTTCAAA  99
      |||||||| ||||||||||||||||||||||||||| |||||||||| ||
seq2  CAACAATC-ACTAGACTCTACAAAAATATAATTGAC-ATTAAGTTTC-AA  92

seq1  ACTTAAATTATGAGTATTTGGACTTAAAAGAGGTTGCTGCCTCTGTGTGG  149
      |||  || ||||||||||| ||||| ||||||  ||||| ||||||||||
seq2  ACT--AAATATGAGTATTTTGACTT-AAAGAG--TGCTG-CTCTGTGTGG  136

seq1  ATGAACCTCTTCTATGATTTGTTAAGAATAGAAATAAATGAAGCTTTTGT  199
      ||||||||| ||||||| ||||| ||||||||||| ||||||||||||||
seq2  ATGAACCTC-TCTATGA-TTGTT-AGAATAGAAAT-AATGAAGCTTTTGT  182

seq1  AGGCCACCTTTGAAATGTTGCCTTTGACCCACCACCAGAATGACTCATTT  249
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGCCACCTTTGAAATG-TGCCTTTGACCCACCACCAGAATGACTCATTT  231

seq1  CATCGTGGAGTTTACTGTTTAAGGAACATCACAGAAGACATGTCTTTCTT  299
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGT-GAGTTTACTGTTTAAGGAACATCACAGAAGACATGTCTTTCTT  280

seq1  TGGCATCACAAGCCTCTTCGTTAGTTTTCTTTCCCCAAATTGAACCCCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCACAAGCCTCTTCGTTAGTTTTCTTTCCCCAAATTGAACCCCTA  330

seq1  TATTCTCATAAATCTAACTACTTTTGTATTCATACTAAATCTTCATACAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCATAAATCTAACTACTTTTGTATTCATACTAAATCTTCATACAC  380

seq1  GAATAAAAAAGGCATAAGAAACTTGTTCCAGAAATCAAAGCATTTAGAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAAAGGCATAAGAAACTTGTTCCAGAAATCAAAGCATTTAGAGT  430

seq1  GGCATTCTCAGTGTCGTTGAGACAGCTATGAAACATAGCATCAAGTATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCTCAGTGTCGTTGAGACAGCTATGAAACATAGCATCAAGTATTT  480

seq1  TAAAAGTGCTCTTTCAGAAAAGTCTCATTAAGTTTCATTAAAGATTTCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGCTCTTTCAGAAAAGTCTCATTAAGTTTCATTAAAGATTTCCC  530

seq1  ACTTGCAGTTGTACATTTGTCTTTGTTTACTGGTACTTTCGTCAGCAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAGTTGTACATTTGTCTTTGTTTACTGGTACTTTCGTCAGCAATT  580

seq1  GAGAGTTTATTTTGTGGTACAGGAAGATGGTGCTCAGACAGACAAAATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTATTTTGTGGTACAGGAAGATGGTGCTCAGACAGACAAAATTA  630

seq1  GAGAACAGAATTCTACAATGGTACCTTTAGCTTGGTAGGGCAGAGACATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGAATTCTACAATGGTACCTTTAGCTTGGTAGGGCAGAGACATC  680

seq1  ATCTCTAAAACAATGAATTTTGAACATTGACAAATAACCAGCAATAGGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAAAACAATGAATTTTGAACATTGACAAATAACCAGCAATAGGGT  730

seq1  CTAATAGAAATGGCCTTTACACATGGGCCAGTGAATGGCAATGTCCTAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGAAATGGCCTTTACACATGGGCCAGTGAATGGCAATGTCCTAAC  780

seq1  TTAAAAATGGAACAGAGTCTTCATCAGGAAACTCAGTGTAGCAGTACTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGGAACAGAGTCTTCATCAGGAAACTCAGTGTAGCAGTACTTA  830

seq1  GTACACAGTCAGGCTAGGAATAAATAATGCCCTCCAGGACAATGCCTGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAGTCAGGCTAGGAATAAATAATGCCCTCCAGGACAATGCCTGAG  880

seq1  TCAAATGTTTATATGTTTATGGTTCTATAAACAATGTATTGTATATTCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTTTATATGTTTATGGTTCTATAAACAATGTATTGTATATTCTT  930

seq1  TTATTTGATCTTCAGTCATTTTGTCATGTATAGCATCCACCCTCATGCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGATCTTCAGTCATTTTGTCATGTATAGCATCCACCCTCATGCTC  980

seq1  CTAAAGCCATGTGCATCCCTGCCAGGCAGGAGATTCCTCTCTGCCCCACT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCCATGTGCATCCCTGCCAGGCAGGAGATTCCTCTCTGCCCCACT  1030

seq1  GTCAGCCATGTCTAGTTCAAGGCTCAGCCATAATCATGTTTAACAAATGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCATGTCTAGTTCAAGGCTCAGCCATAATCATGTTTAACAAATGT  1080

seq1  GTTTGACTAACTAAATTAAACTGTAATATAAATGGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACTAACTAAATTAAACTGTAATATAAATGGAATTC  1120

seq1: chr14_98306454_98307591
seq2: B6Ng01-094G19.g_67_1182

seq1  GAATTCACGCAACTGAGGAAGGCTGAGTAGGAAAAGTTATCTTTCCGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGCAACTGAGGAAGGCTGAGTAGGAAAAGTTATCTTTCCGTAG  50

seq1  AAGAACAGAACAATTATTTATCCAATACCAGATAGATGGTTAGCACTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGAACAATTATTTATCCAATACCAGATAGATGGTTAGCACTGAA  100

seq1  AATACAAGAATTACAGTATTAAGACTAATTAGGTTATATTTAGAAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGAATTACAGTATTAAGACTAATTAGGTTATATTTAGAAATATA  150

seq1  TATGCACACACACACATTCACATGCATACATACATACATACATACATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACACACACACATTCACATGCATACATACATACATACATACATACA  200

seq1  TACATAAGTCATACTATCATACTGTCATACTGTTATACATACATAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGTCATACTATCATACTGTCATACTGTTATACATACATAATAAG  250

seq1  AGTCAATGAAAAACCAGTTTATGAATTTGAAAGAGAGCAAATAAGGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGAAAAACCAGTTTATGAATTTGAAAGAGAGCAAATAAGGGTGT  300

seq1  TTGGAAGGTTCTAGGGAGGACAAGGACAGAAGAAATGGTCATACAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGTTCTAGGGAGGACAAGGACAGAAGAAATGGTCATACAATTAT  350

seq1  GATGTTAAAAAGGCTCATATCAAAGTTTATCAACTACAAATAGAGTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAAAAAGGCTCATATCAAAGTTTATCAACTACAAATAGAGTTAAA  400

seq1  TTATTATAGTATCCAATGTCTTTATTTTAGATGGCTTTTGAAGTATTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATAGTATCCAATGTCTTTATTTTAGATGGCTTTTGAAGTATTTGT  450

seq1  ATATTTATTATAAGAGGTGAGTATGAAGTTTTACAATAAAAATATGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTATAAGAGGTGAGTATGAAGTTTTACAATAAAAATATGAAAG  500

seq1  AATGCAAGGACACATTTATGTATTAAATGTAGTATAGTAGAGTTGCATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAGGACACATTTATGTATTAAATGTAGTATAGTAGAGTTGCATCC  550

seq1  ATAATCAAGCCAGGTTTTCAGAATTCATGCATCTTGATATTGATTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAGCCAGGTTTTCAGAATTCATGCATCTTGATATTGATTTCTTC  600

seq1  TTTTTAATTTTTTTCTTAAAATTAGAAAAAATGTTGTTTGATAATCAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTTTTTTCTTAAAATTAGAAAAAATGTTGTTTGATAATCAAGC  650

seq1  ATGCGTATGATGTCTTGACAAAACCTACATTCGTTTTCTTCCACTCCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTATGATGTCTTGACAAAACCTACATTCGTTTTCTTCCACTCCAAT  700

seq1  TTTTCTCTGTTCCTCTAAAATTTTCCTACCAACTTTATGTGTTTATATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGTTCCTCTAAAATTTTCCTACCAACTTTATGTGTTTATATGT  750

seq1  TTAAACCAATTGAGTTGACTTAGTGCTACCAATTTGTGACTGGGTGCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCAATTGAGTTGACTTAGTGCTACCAATTTGTGACTGGGTGCAGG  800

seq1  TAGGGACAATGGATAAAACATAGAGATCCTCTCAGCGACCAAATCTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACAATGGATAAAACATAGAGATCCTCTCAGCGACCAAATCTCTGA  850

seq1  AAAAAAAAACTGTATATTC-TCCATCAACTCTGATCGTCAGTAAAACGAG  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAAAAAAACTGTATATTCTTCCATCAACTCTGATCGTCAGTAAAACGAG  900

seq1  CTCCTTATTTAGACTGAAAGGGCCTCTCAAGATCCAAGAGAAGTTACCAG  949
      ||||||||||||||||||| |||| |||| ||||| |||| ||||| |||
seq2  CTCCTTATTTAGACTGAAA-GGCCCCTCAGGATCC-AGAG-AGTTA-CAG  946

seq1  ACTAGGATAACTTGGCTAAGCTTTAGACATAATTTCAATTCAATAAGGTT  999
      ||||||||||| ||||||||||||||| |||  ||||  || |||    |
seq2  ACTAGGATAAC-TGGCTAAGCTTTAGAAATA--TTCA--TC-ATA---GT  987

seq1  GATATTTATTTACTTATATAGAAATATATAATATGTACTGGAGAAATATT  1049
      |||||||| ||||||||| ||||  |||| ||||||||||||||||||| 
seq2  GATATTTA-TTACTTATAAAGAA--ATATTATATGTACTGGAGAAATATG  1034

seq1  GTGTTTTATTGAAATAGAAATTTCTAAGTTAACCGATATATCTCCTACAA  1099
      |||||||| || |||||  |||||| |||  |||||||| |||||| |  
seq2  GTGTTTTA-TGGAATAG-GATTTCT-AGT--ACCGATAT-TCTCCTCC--  1076

seq1  AGCATGACATCCATGTTTCCAATAC-TTTTTAATTTATCT  1138
      ||||||||||||||||| ||||||| ||||||||||||||
seq2  AGCATGACATCCATGTTCCCAATACTTTTTTAATTTATCT  1116