BAC Information

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BAC

Clone NameB6Ng01-095A10
Chromosome14 (Build37)
Map Location 65,694,218 - 65,695,380
singlet/doubletsinglet
Overlap geneExtl3
Upstream gene4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra, Kif13b, Hmbox1, LOC100043657, D14Ertd231e
Downstream geneFzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095A10.bB6Ng01-095A10.g
ACCDH906077DH906078
length5151,129
definitionDH906077|Mus musculus domesticus DNA, BAC clone: B6Ng01-095A10, 5' end.DH906078|Mus musculus domesticus DNA, BAC clone: B6Ng01-095A10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
taaagccccagaagatatttttaacaaaatcatagtagaaaaaatattta
acctgaggcaggaaatgcctataaagatagaagaagcatacagaacacaa
aatagactggacttgaaaagaaagtcccctcgccatataataatcaaaac
actaattatactgaacaaagaaaaaatactaaaagctgaaaggaaaaagg
aacaagtaatatataaaagcagacctattagaattacaaccagtctctcc
atggagactccaaaagccagcagggcctagacagatgtcctacagactct
aagagaccacagatgcagcctagacctagcaaaactttttattaccatag
atggagaaaacaatatattccataataaaatcaaatttaaacaatatcta
tttacaaagtcagacctacagaatgtactagaaggaaaactctaacccaa
ggaggttaactacacctatgaaaacacaggaaatgatctcacatgaccaa
aaccagtgtgtatgt
gaattcacttgcaaaaaccagccgaagcccagcctgccgactgagtgggc
actgtgtggggagcgggaagaccgcctggagttactgaagctctccacct
tcgccctcatcatcactcccggggacccgcacctgctcatttcatctggg
tgtgccacgcggctcttcgaggccctggaggtgggggccgtgccggtggt
gctcggggagcaggtgcagctcccgtaccacgacatgctgcagtggaacg
aggccgccctggtggtgcccaagcctcgcgtcacagaggtccacttcctg
ttacgaagtctttcagacagtgatctgttggccatgaggcggcaaggccg
ctttctctgggagacctacttctccaccgcagacagtatttttaataccg
tgctggccatgattaggactcgaattcagatcccagctgctcccatccgg
gaagaggtagcggctgagatcccccatcgttcaggcaaagcagctggaac
tgaccccaacatggctgacaatggggacctggacctggggccggtagaga
cagaaccaccctatgcctcacctaaatacctccgcaatttcactctgact
gtcacagactgttaccgtggctggaactctgccccgggacccttccatct
ttttccccacacaccctttgatcctgtgttgccctctgaggccaaattcc
tgggctcagggactggatttcggcccatcggtggcggggctgggggctct
ggcaaggagttccaggcagcgctcggaggcaatgtccagcgggagcagtt
cacagttgtgatgctgacctacgagcgggaggaagtgctcatgaactccc
tggagagactcaacggcctcccctacctgacaagtagtggtggtgtggac
tctcccaagctgccctcgaggactttgtgcagacatgtgtcccatcatgg
taataaaatgggcagtgtgttttactatgcggatagtaccccacactatg
ccgctctagttttatcattttgtcccttgtagtagaggtgatgtatgtgt
actttgtgtgggtgtgcgcgcccagggttacatgtggtgcattatgactc
tgggctgggatgacaagccttacatgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_65694218_65695380
seq2: B6Ng01-095A10.g_69_1197 (reverse)

seq1  CAGCATGTAAAAGGCCCTGGGCTCAATCCCCAGCACCAGGAGTGCATACA  50
      ||||||||||   | | ||   |||   |||||| ||| |||| |||| |
seq2  CAGCATGTAA---GGCTTG---TCA--TCCCAGC-CCA-GAGT-CATA-A  38

seq1  TGCACACACATGTACACGTGCGCGCGCACACACACACAGAGGTACACATA  100
      ||||| ||||||||  | || |||||||||| |||||| | |||||||||
seq2  TGCAC-CACATGTAACCCTGGGCGCGCACACCCACACA-AAGTACACATA  86

seq1  CATTCACCTCTACTACAAGGGAACAAAAATGATAAAAACTAGAGGCGGCA  150
      || |||||||||||||||||||   |||||||| ||||||||| ||||||
seq2  CA-TCACCTCTACTACAAGGGA--CAAAATGAT-AAAACTAGA-GCGGCA  131

seq1  TTAAGTGTGGGGTACTTATTCCGCATAGTAAAACACACTGCCCATTTTAT  200
      |  |||||||||||||   |||||||||||||||||||||||||||||||
seq2  T--AGTGTGGGGTACT--ATCCGCATAGTAAAACACACTGCCCATTTTAT  177

seq1  TACCATGATGGGGACACCAATGTCTGGCCACAAAAGGTCCTCCGAGGGCA  250
      ||||||||| |||||||  |||||||  ||||||  ||||| ||||||||
seq2  TACCATGAT-GGGACAC--ATGTCTG--CACAAA--GTCCT-CGAGGGCA  219

seq1  GCTTGGGAGAGTTCCACACCACCACTACCTTGTTCAGGTAGGGGAGGCCG  300
      ||||||||||| ||||||||||||||| |||| |||||||||||||||||
seq2  GCTTGGGAGAG-TCCACACCACCACTA-CTTG-TCAGGTAGGGGAGGCCG  266

seq1  TTGAGTCTCTCCAGGGAGTTCATGAGCACTTCCTCCCGCTCGTAGGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCTCTCCAGGGAGTTCATGAGCACTTCCTCCCGCTCGTAGGTCAG  316

seq1  CATCACAACTGTGAACTGCTCCCGCTGGACATTGCCTCCGAGCGCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAACTGTGAACTGCTCCCGCTGGACATTGCCTCCGAGCGCTGCCT  366

seq1  GGAACTCCTTGCCAGAGCCCCCAGCCCCGCCACCGATGGGCCGAAATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCCTTGCCAGAGCCCCCAGCCCCGCCACCGATGGGCCGAAATCCA  416

seq1  GTCCCTGAGCCCAGGAATTTGGCCTCAGAGGGCAACACAGGATCAAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGAGCCCAGGAATTTGGCCTCAGAGGGCAACACAGGATCAAAGGG  466

seq1  TGTGTGGGGAAAAAGATGGAAGGGTCCCGGGGCAGAGTTCCAGCCACGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGGAAAAAGATGGAAGGGTCCCGGGGCAGAGTTCCAGCCACGGT  516

seq1  AACAGTCTGTGACAGTCAGAGTGAAATTGCGGAGGTATTTAGGTGAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCTGTGACAGTCAGAGTGAAATTGCGGAGGTATTTAGGTGAGGCA  566

seq1  TAGGGTGGTTCTGTCTCTACCGGCCCCAGGTCCAGGTCCCCATTGTCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGGTTCTGTCTCTACCGGCCCCAGGTCCAGGTCCCCATTGTCAGC  616

seq1  CATGTTGGGGTCAGTTCCAGCTGCTTTGCCTGAACGATGGGGGATCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGGGGTCAGTTCCAGCTGCTTTGCCTGAACGATGGGGGATCTCAG  666

seq1  CCGCTACCTCTTCCCGGATGGGAGCAGCTGGGATCTGAATTCGAGTCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTACCTCTTCCCGGATGGGAGCAGCTGGGATCTGAATTCGAGTCCTA  716

seq1  ATCATGGCCAGCACGGTATTAAAAATACTGTCTGCGGTGGAGAAGTAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGCCAGCACGGTATTAAAAATACTGTCTGCGGTGGAGAAGTAGGT  766

seq1  CTCCCAGAGAAAGCGGCCTTGCCGCCTCATGGCCAACAGATCACTGTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGAGAAAGCGGCCTTGCCGCCTCATGGCCAACAGATCACTGTCTG  816

seq1  AAAGACTTCGTAACAGGAAGTGGACCTCTGTGACGCGAGGCTTGGGCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTCGTAACAGGAAGTGGACCTCTGTGACGCGAGGCTTGGGCACC  866

seq1  ACCAGGGCGGCCTCGTTCCACTGCAGCATGTCGTGGTACGGGAGCTGCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGCGGCCTCGTTCCACTGCAGCATGTCGTGGTACGGGAGCTGCAC  916

seq1  CTGCTCCCCGAGCACCACCGGCACGGCCCCCACCTCCAGGGCCTCGAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCCGAGCACCACCGGCACGGCCCCCACCTCCAGGGCCTCGAAGA  966

seq1  GCCGCGTGGCACACCCAGATGAAATGAGCAGGTGCGGGTCCCCGGGAGTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCGTGGCACACCCAGATGAAATGAGCAGGTGCGGGTCCCCGGGAGTG  1016

seq1  ATGATGAGGGCGAAGGTGGAGAGCTTCAGTAACTCCAGGCGGTCTTCCCG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAGGGCGAAGGTGGAGAGCTTCAGTAACTCCAGGCGGTCTTCCCG  1066

seq1  CTCCCCACACAGTGCCCACTCAGTCGGCAGGCTGGGCTTCGGCTGGTTTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCACACAGTGCCCACTCAGTCGGCAGGCTGGGCTTCGGCTGGTTTT  1116

seq1  TGCAAGTGAATTC  1163
      |||||||||||||
seq2  TGCAAGTGAATTC  1129