BAC Information

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BAC

Clone NameB6Ng01-095H11
Chromosome14 (Build37)
Map Location 61,155,049 - 61,283,706
singlet/doubletdoublet
Overlap geneEG628836, Spata13
Upstream geneCab39l, Cdadc1, Tmem46, Atp8a2, LOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1
Downstream geneC1qtnf9, Mipep, LOC100043586, Tnfrsf19, Sacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095H11.bB6Ng01-095H11.g
ACCDH906401DH906402
length1,1611,072
definitionDH906401|Mus musculus domesticus DNA, BAC clone: B6Ng01-095H11, 5' end.DH906402|Mus musculus domesticus DNA, BAC clone: B6Ng01-095H11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,155,049 - 61,156,248)(61,282,608 - 61,283,706)
sequence
gaattcttgagttttctctttctgtctttgcttctagtgatgtgtttttc
tactgcactcaaataccccagcactgagaaagagagagagagagagagag
agagagagagagagagagagagagagagaggttcaaagtcaaatccaaac
ttggcaagctgcttccagcatagtaatgttcatccagcaggacgaggcac
atcccaccccaccccacctggtcgctcctggctcccccgctgtgactcct
gtctctccttcctgctgtggctcccgctgtgcttccccactgccctggtt
ccacagtgggtatttcttggacagctctctttctgcttctttcttttttg
tatgatggtctggtttactcgggttttctgaaagcttacttagggtgagg
ctgtcagccatgggaacgtagggtgagggtgtcaggatagaaaaccttgg
catcacctgctgcccttgtgggcatcagaccaaaacaacagtgggcacag
aaactgctctgaactccgggactgtgccaacttaatggcaggtggtgtcc
agcctaacgtggttctccttcctcaaatttttagaggatatagaggattt
attaaatcgcatgaaatagtcaacattttagtacaaagtagactttgtgg
tagataacttgaccaactgtgggctaatgaaagtgtgctgagtacaccta
agtggccaagctgggatgcggcaggttagctgtactaacctgtaatattt
tcaccaacctacatatcgggtttgtcgggacatgaccccatcacaagaga
aggagcaaacatcaactcggtcttcatccatccctctggcaggtaattga
gggaatggagattaaatagaagacatctaagcccttaccatgggccacta
ttgtacagaggatgaaagaaatcccacaaatttagactaactttttcttc
ttaaggattacatgttacttaacacggattgtgactctgagatatagcag
aagaaactgtcaattttaaatctctttggttcaaactctggctgcaaatg
ctaccatttcaaatctggtcttgtactgattctgtgcaccaaggagtgct
caactcataatccagccctgtactgaggcaggaacctgtgatttgagtca
gctgggccatg
gaattccaggaccaagtcaactctgggggagggggaagtgctctctgaga
tcctgcagggagcccactgtgctgttactagttaacttccaggtttgtat
aaaccaacttttaaattctgtctgaggagcagggtgggcagggaatcatt
aatctgcagagtggcctaagcctggggtgaccacatctgggaacacaaca
caccatcctagctccccagctactttgtcttgtctctcttcacactgtga
gctgcgctttcccaccggcggttctccacaaacccaacagcctactgaaa
tgagtctgggagctttcccagagagcttctatctcacttcttaaagaccc
aagaaagaagagtttccattaaatttagctgcacgaacaagacctcctgg
tgctcactcaatcaaataatttaaatggtgtaaagtttgggatgtttcta
gtaagaaatttaaaaatctatatattgatgagttatctttcatactttgt
catgtaatcatgctgttgtagcgccgcagtcctgagtctgggatccctgg
tccaagaggcctttcaaggtctctgggtgcagctgctggcctcatacaca
gaagagaagcaagaaccagtgagacatagtgacactattgaccctgggac
tcaaaaatgggaaagcggacctgggacttgaggacaagagttaagtattt
tgtatcaactcttcaaatccctgcctgtcttgggtgttttcagagttctt
ataactaattcccttcttgacttatcacactgtattagcatccctgtgtg
gattggggagtgctggtctacactgtcagcgtggctgagttgagtgatgt
ttactgaagttcgcttctgatgtgcctgtgaaggtattttcagaaagact
taacataggctacgccatccaatggtctgggggccagacggaaaaagcct
gtgagagagacaccagtcattagtgactcactcttaccatgcactgcatg
ctgctgtgctgctgactcagaccctgcttctctggctttccggtgagtca
cgcagcactgtccgggagcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_61155049_61156248
seq2: B6Ng01-095H11.b_44_1204

seq1  GAATTCTTGAGTTTTCTCTTTCTGTCTTTGCTTCTAGTGATGTGTTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGTTTTCTCTTTCTGTCTTTGCTTCTAGTGATGTGTTTTTC  50

seq1  TACTGCACTCAAATACCCCAGCACTGAGAAAGAGAGAGAGAGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCACTCAAATACCCCAGCACTGAGAAAGAGAGAGAGAGAGAGAGAG  100

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCAAAGTCAAATCCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCAAAGTCAAATCCAAAC  150

seq1  TTGGCAAGCTGCTTCCAGCATAGTAATGTTCATCCAGCAGGACGAGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAAGCTGCTTCCAGCATAGTAATGTTCATCCAGCAGGACGAGGCAC  200

seq1  ATCCCACCCCACCCCACCTGGTCGCTCCTGGCTCCCCCGCTGTGACTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACCCCACCCCACCTGGTCGCTCCTGGCTCCCCCGCTGTGACTCCT  250

seq1  GTCTCTCCTTCCTGCTGTGGCTCCCGCTGTGCTTCCCCACTGCCCTGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCCTTCCTGCTGTGGCTCCCGCTGTGCTTCCCCACTGCCCTGGTT  300

seq1  CCACAGTGGGTATTTCTTGGACAGCTCTCTTTCTGCTTCTTTCTTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGGGTATTTCTTGGACAGCTCTCTTTCTGCTTCTTTCTTTTTTG  350

seq1  TATGATGGTCTGGTTTACTCGGGTTTTCTGAAAGCTTACTTAGGGTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGGTCTGGTTTACTCGGGTTTTCTGAAAGCTTACTTAGGGTGAGG  400

seq1  CTGTCAGCCATGGGAACGTAGGGTGAGGGTGTCAGGATAGAAAACCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGCCATGGGAACGTAGGGTGAGGGTGTCAGGATAGAAAACCTTGG  450

seq1  CATCACCTGCTGCCCTTGTGGGCATCAGACCAAAACAACAGTGGGCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCTGCTGCCCTTGTGGGCATCAGACCAAAACAACAGTGGGCACAG  500

seq1  AAACTGCTCTGAACTCCGGGACTGTGCCAACTTAATGGCAGGTGGTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTCTGAACTCCGGGACTGTGCCAACTTAATGGCAGGTGGTGTCC  550

seq1  AGCCTAACGTGGTTCTCCTTCCTCAAATTTTTAGAGGATATAGAGGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAACGTGGTTCTCCTTCCTCAAATTTTTAGAGGATATAGAGGATTT  600

seq1  ATTAAATCGCATGAAATAGTCAACATTTTAGTACAAAGTAGACTTTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCGCATGAAATAGTCAACATTTTAGTACAAAGTAGACTTTGTGG  650

seq1  TAGATAACTTGACCAACTGTGGGCTAATGAAAGTGTGCTGAGTACACCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAACTTGACCAACTGTGGGCTAATGAAAGTGTGCTGAGTACACCTA  700

seq1  AGTGGCCAAGCTGGGATGCGGCAGGTTAGCTGTACTAACCTGTAATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCAAGCTGGGATGCGGCAGGTTAGCTGTACTAACCTGTAATATTT  750

seq1  TCACCAACCTACATATCGGGTTTGTCGGGACATGACCCCATCACAAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAACCTACATATCGGGTTTGTCGGGACATGACCCCATCACAAGAGA  800

seq1  AGGAGCAAACATCAACTCGGTCTTCATCCATCCCTCTGGCAGGGTAATTG  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGGAGCAAACATCAACTCGGTCTTCATCCATCCCTCTGGCA-GGTAATTG  849

seq1  AGGGAATGGAGATTAAATAGAAGACATCTAAGCCCCTTACCATGGGCCAC  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGGAATGGAGATTAAATAGAAGACATCTAAG-CCCTTACCATGGGCCAC  898

seq1  TATTGTACAGAGGATGAAAGAAATCCCACAAATTTTAGACTTACCTTTTC  950
      |||||||||||||||||||||||||||||||| |||||||| || |||||
seq2  TATTGTACAGAGGATGAAAGAAATCCCACAAA-TTTAGACTAACTTTTTC  947

seq1  TTCTTAAGGATTACATGTTACTTAACACGGAATTGTTGACTCTGAGATTA  1000
      |||||||||||||||||||||||||||||| |||| ||||||||||| ||
seq2  TTCTTAAGGATTACATGTTACTTAACACGG-ATTG-TGACTCTGAGA-TA  994

seq1  TAGCAGAAGAAACTGTCAATTTTAAATCTCTTTTGGTTCAAAACTCCTGG  1050
      |||||||||||||||||||||||||||||| |||||||| ||||| ||||
seq2  TAGCAGAAGAAACTGTCAATTTTAAATCTC-TTTGGTTC-AAACT-CTGG  1041

seq1  CTTGCAAAATGCCTACACAATTTCAAAATCTGGTTCTTTGTTACATGATG  1100
      | ||| ||||||    || ||||| |||||||| ||||   ||| |||| 
seq2  C-TGC-AAATGC---TACCATTTC-AAATCTGG-TCTT--GTAC-TGAT-  1080

seq1  TCTGTTGCACACCAAAGTGAGTGGCTCACACTCATAATCCCAGCCCTTGG  1150
      |||||    ||||||   |||| ||||| ||||||||| ||||||||   
seq2  TCTGT---GCACCAA--GGAGT-GCTCA-ACTCATAAT-CCAGCCCT---  1119

seq1  GAGACTGAGGCAGGAGACCACTGTGAATTTGAAGTCAGCCTGGGCACATG  1200
         |||||||||||| ||  ||||| ||||| |||||| |||||| ||||
seq2  -GTACTGAGGCAGGA-AC--CTGTG-ATTTG-AGTCAG-CTGGGC-CATG  1161

seq1: chr14_61282608_61283706
seq2: B6Ng01-095H11.g_66_1137 (reverse)

seq1  GATGCTTCCCGGACAGTTGCTGCTGTTGAACTCACCGTGAAAGGCCAGAG  50
      ||||| |||||||||| |||||| ||   |||||||| |||| |||||||
seq2  GATGC-TCCCGGACAG-TGCTGC-GT--GACTCACCG-GAAA-GCCAGAG  43

seq1  AAGCCAGGGTCTGAGGTCAGCAAGGCACAGCAGCATTGGCAGGTGCATGG  100
      ||| |||||||||| |||||||  ||||||||||||  ||| ||||||| 
seq2  AAG-CAGGGTCTGA-GTCAGCA--GCACAGCAGCAT--GCA-GTGCATG-  85

seq1  TGTAGGAGTTGGAGGTCACTTAATGGACTGGGTGTCTTCTCTCACAGGCT  150
       ||| ||||  || ||||| |||| |||| |||||| |||||||||||| 
seq2  -GTAAGAGT--GA-GTCAC-TAAT-GACT-GGTGTC-TCTCTCACAGGC-  126

seq1  TTTTTTCCGTCTTGGCCCCCAGACCATTGGATGGCGTAGCCTATGTTTAG  200
       |||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  -TTTTTCCGTC-TGGCCCCCAGACCATTGGATGGCGTAGCCTATGTTAAG  174

seq1  TCTTTTCTGAAAATACCTTCACAGGCACATCAGAAGCGAACTTCAGTAAA  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-TTTCTGAAAATACCTTCACAGGCACATCAGAAGCGAACTTCAGTAAA  223

seq1  CATCACTCAACTCAGCCACGCTGACAGTGTAGACCAGCACTCCCCAATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTCAACTCAGCCACGCTGACAGTGTAGACCAGCACTCCCCAATCC  273

seq1  ACACAGGGATGCTAATACAGTGTGATAAGTCAAGAAGGGAATTAGTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGATGCTAATACAGTGTGATAAGTCAAGAAGGGAATTAGTTATA  323

seq1  AGAACTCTGAAAACACCCAAGACAGGCAGGGATTTGAAGAGTTGATACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTGAAAACACCCAAGACAGGCAGGGATTTGAAGAGTTGATACAA  373

seq1  AATACTTAACTCTTGTCCTCAAGTCCCAGGTCCGCTTTCCCATTTTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTAACTCTTGTCCTCAAGTCCCAGGTCCGCTTTCCCATTTTTGAG  423

seq1  TCCCAGGGTCAATAGTGTCACTATGTCTCACTGGTTCTTGCTTCTCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGTCAATAGTGTCACTATGTCTCACTGGTTCTTGCTTCTCTTCT  473

seq1  GTGTATGAGGCCAGCAGCTGCACCCAGAGACCTTGAAAGGCCTCTTGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGAGGCCAGCAGCTGCACCCAGAGACCTTGAAAGGCCTCTTGGAC  523

seq1  CAGGGATCCCAGACTCAGGACTGCGGCGCTACAACAGCATGATTACATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATCCCAGACTCAGGACTGCGGCGCTACAACAGCATGATTACATGA  573

seq1  CAAAGTATGAAAGATAACTCATCAATATATAGATTTTTAAATTTCTTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTATGAAAGATAACTCATCAATATATAGATTTTTAAATTTCTTACT  623

seq1  AGAAACATCCCAAACTTTACACCATTTAAATTATTTGATTGAGTGAGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATCCCAAACTTTACACCATTTAAATTATTTGATTGAGTGAGCAC  673

seq1  CAGGAGGTCTTGTTCGTGCAGCTAAATTTAATGGAAACTCTTCTTTCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGTCTTGTTCGTGCAGCTAAATTTAATGGAAACTCTTCTTTCTTG  723

seq1  GGTCTTTAAGAAGTGAGATAGAAGCTCTCTGGGAAAGCTCCCAGACTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTAAGAAGTGAGATAGAAGCTCTCTGGGAAAGCTCCCAGACTCAT  773

seq1  TTCAGTAGGCTGTTGGGTTTGTGGAGAACCGCCGGTGGGAAAGCGCAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAGGCTGTTGGGTTTGTGGAGAACCGCCGGTGGGAAAGCGCAGCT  823

seq1  CACAGTGTGAAGAGAGACAAGACAAAGTAGCTGGGGAGCTAGGATGGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTGAAGAGAGACAAGACAAAGTAGCTGGGGAGCTAGGATGGTGT  873

seq1  GTTGTGTTCCCAGATGTGGTCACCCCAGGCTTAGGCCACTCTGCAGATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTCCCAGATGTGGTCACCCCAGGCTTAGGCCACTCTGCAGATTA  923

seq1  ATGATTCCCTGCCCACCCTGCTCCTCAGACAGAATTTAAAAGTTGGTTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCCCTGCCCACCCTGCTCCTCAGACAGAATTTAAAAGTTGGTTTA  973

seq1  TACAAACCTGGAAGTTAACTAGTAACAGCACAGTGGGCTCCCTGCAGGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCTGGAAGTTAACTAGTAACAGCACAGTGGGCTCCCTGCAGGAT  1023

seq1  CTCAGAGAGCACTTCCCCCTCCCCCAGAGTTGACTTGGTCCTGGAATTC  1099
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGAGCACTTCCCCCTCCCCCAGAGTTGACTTGGTCCTGGAATTC  1072