BAC Information

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BAC

Clone NameB6Ng01-095O09
Chromosome14 (Build37)
Map Location 107,778,447 - 107,926,713
singlet/doubletdoublet
Overlap geneLOC668752
Upstream geneLOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
Downstream geneEG668754, LOC668757
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095O09.bB6Ng01-095O09.g
ACCDH906711DH906712
length4111,109
definitionDH906711|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O09, 5' end.DH906712|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,778,447 - 107,778,863)(107,925,564 - 107,926,713)
sequence
ccacattaggctgtttttctcgcaacaggggactgaattcttgcattttg
cccattcaagtacctgtactaacttatgtacacatactaatcccccaaaa
tatgaacataaaacatttttcaattttaataatattatacaccataagct
agacatttagagacggaggaaagaagaggagactagaatacagtagatgg
agagaggagaggaagaagttttagcatgtataaaaatcacttgaaaacac
tttacttaggctccagatacataggtagcagaggatggccttttctgaca
tcaggggtaggcaaggcccttggtcctgtggaagtttgatgttctagggt
agggggatgttctagtgtaggggatgctggagttctgggcaggagagggt
gggtgagtatg
gaattcagggacagccagggctacacagagaaaccctgtctcaaaaaaaa
aaaaaaaaaaaaaaaaaagaaagaaaaaaaaaccaccaccaccaccacca
ccaataataataataataatgaaagccaattccctcttcatctcattgtg
ttccttagaattcgtcactgtgataaaaggaagacaggcatcatgtgtat
gagcaggcatgtttaccagtcctagaatcaagaatcaagacacttagcat
ggcattattctaggggtcagctgtctccaaagcatatgtgtatggccctg
tggatcaaatgtagagactcaaaagcagagaaacactgtagaactaagct
atgcctttgccttttttattttttttaaactattttcaacacagattttc
actaagtcatctaggctagtttggtctcactttggtaatcaggcaggcct
tgaacttttgatcctcctgcttcagacttgagaatagctgggattataag
ctttcatcacaaggcccagttacactatctaggtcacatatctgagcact
ctggctcaagggtcttataaatgaagcttagaggttttaccttggttaat
gtttattatgaggggagaaaggagacatacagcaggagaggaggtggagt
aagggagttgcaagaaagggtgagtggaataaatagaaggaaattaaaat
gattgcatgcgtgaacatgttatatgaaactcataatttcgtacacaaat
tacaaataaaactatagctaggataattttaaaaaatacagaattaaggg
aagaaaagtttattattgtcagtgtaagagcctttatatataattctgag
tgagaatattatcttcagtatgcttctttagaatgttaaaccatcactgg
gtaacaaacatttatttttttgcagtttcagagtatatattacgtgacta
ctggaaacactcacgatcctatggccatcttcatcctccctaggatgctc
acatgttgtaggtgatcacttgtaatagatctaggtggactaaattcaat
ctcgacgctggagtgggaaggaggatatgtagcttcactctgctactgta
cacacgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_107778447_107778863
seq2: B6Ng01-095O09.b_50_466

seq1  GAATTCCCACATTAGGCTGTTTTTCTCGCAACAGGGGACTGAATTCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACATTAGGCTGTTTTTCTCGCAACAGGGGACTGAATTCTTGC  50

seq1  ATTTTGCCCATTCAAGTACCTGTACTAACTTATGTACACATACTAATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCCATTCAAGTACCTGTACTAACTTATGTACACATACTAATCCC  100

seq1  CCAAAATATGAACATAAAACATTTTTCAATTTTAATAATATTATACACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATATGAACATAAAACATTTTTCAATTTTAATAATATTATACACCA  150

seq1  TAAGCTAGACATTTAGAGACGGAGGAAAGAAGAGGAGACTAGAATACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTAGACATTTAGAGACGGAGGAAAGAAGAGGAGACTAGAATACAGT  200

seq1  AGATGGAGAGAGGAGAGGAAGAAGTTTTAGCATGTATAAAAATCACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGAGAGGAGAGGAAGAAGTTTTAGCATGTATAAAAATCACTTGA  250

seq1  AAACACTTTACTTAGGCTCCAGATACATAGGTAGCAGAGGATGGCCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTTACTTAGGCTCCAGATACATAGGTAGCAGAGGATGGCCTTTT  300

seq1  CTGACATCAGGGGTAGGCAAGGCCCTTGGTCCTGTGGAAGTTTGATGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCAGGGGTAGGCAAGGCCCTTGGTCCTGTGGAAGTTTGATGTTC  350

seq1  TAGGGTAGGGGGATGTTCTAGTGTAGGGGATGCTGGAGTTCTGGGCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTAGGGGGATGTTCTAGTGTAGGGGATGCTGGAGTTCTGGGCAGGA  400

seq1  GAGGGTGGGTGAGTATG  417
      |||||||||||||||||
seq2  GAGGGTGGGTGAGTATG  417

seq1: chr14_107925564_107926713
seq2: B6Ng01-095O09.g_70_1178 (reverse)

seq1  ACCCGTGGTGTACCAGTTAGCAGGATGTTTGGAAGCTACATAATCCTCCT  50
      |||||| ||||| ||| ||||||  |     |||||||||| ||||||||
seq2  ACCCGT-GTGTA-CAG-TAGCAGAGT-----GAAGCTACAT-ATCCTCCT  41

seq1  TCACACTCAGACAGTCGAGATTTTGATATTTTTAAGTCACACTAGATACT  100
      || |||||  |  |||||||  |||| ||||   ||||   |||||    
seq2  TCCCACTC-CAGCGTCGAGA--TTGA-ATTT---AGTCCACCTAGA----  80

seq1  TATTTTACAAGTGGAATCACCTTAACAACATGTGAAGCATCACTAGGGAA  150
      | | |||||||||  |||||||  |||||||||| |||||| |||||| |
seq2  TCTATTACAAGTG--ATCACCT--ACAACATGTG-AGCATC-CTAGGG-A  123

seq1  GGATTGAAAGAATGGGCCATAGGAATCGTGAGTGTTTCCAGTAGTCACGG  200
      ||||   ||||   ||||||||| ||||||||||||||||||||||||| 
seq2  GGAT--GAAGA--TGGCCATAGG-ATCGTGAGTGTTTCCAGTAGTCACG-  167

seq1  TTAAATATATACTTCTTGAAAACTGCAATAAAAATAAATGTTTGTTACCC  250
         ||||||||| |||   ||||||||| |||||||||||||||||||||
seq2  --TAATATATAC-TCT--GAAACTGCAA-AAAAATAAATGTTTGTTACCC  211

seq1  AGTGATGGTTTAACATTCTTAAAGAAGCATACTGAAGATAATATTTCTCA  300
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  AGTGATGGTTTAACATTC-TAAAGAAGCATACTGAAGATAATA-TTCTCA  259

seq1  CTCAGAATTATATATAAAGGCTCTTACACTGACAATAATAAACTTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATTATATATAAAGGCTCTTACACTGACAATAATAAACTTTTCTT  309

seq1  CCCTTAATTCTGTATTTTTTAAAATTATCCTAGCTATAGTTTTATTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAATTCTGTATTTTTTAAAATTATCCTAGCTATAGTTTTATTTGTA  359

seq1  ATTTGTGTACGAAATTATGAGTTTCATATAACATGTTCACGCATGCAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTACGAAATTATGAGTTTCATATAACATGTTCACGCATGCAATC  409

seq1  ATTTTAATTTCCTTCTATTTATTCCACTCACCCTTTCTTGCAACTCCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTCCTTCTATTTATTCCACTCACCCTTTCTTGCAACTCCCTT  459

seq1  ACTCCACCTCCTCTCCTGCTGTATGTCTCCTTTCTCCCCTCATAATAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACCTCCTCTCCTGCTGTATGTCTCCTTTCTCCCCTCATAATAAAC  509

seq1  ATTAACCAAGGTAAAACCTCTAAGCTTCATTTATAAGACCCTTGAGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCAAGGTAAAACCTCTAAGCTTCATTTATAAGACCCTTGAGCCAG  559

seq1  AGTGCTCAGATATGTGACCTAGATAGTGTAACTGGGCCTTGTGATGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCAGATATGTGACCTAGATAGTGTAACTGGGCCTTGTGATGAAAG  609

seq1  CTTATAATCCCAGCTATTCTCAAGTCTGAAGCAGGAGGATCAAAAGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAATCCCAGCTATTCTCAAGTCTGAAGCAGGAGGATCAAAAGTTCA  659

seq1  AGGCCTGCCTGATTACCAAAGTGAGACCAAACTAGCCTAGATGACTTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGCCTGATTACCAAAGTGAGACCAAACTAGCCTAGATGACTTAGT  709

seq1  GAAAATCTGTGTTGAAAATAGTTTAAAAAAAATAAAAAAGGCAAAGGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCTGTGTTGAAAATAGTTTAAAAAAAATAAAAAAGGCAAAGGCAT  759

seq1  AGCTTAGTTCTACAGTGTTTCTCTGCTTTTGAGTCTCTACATTTGATCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGTTCTACAGTGTTTCTCTGCTTTTGAGTCTCTACATTTGATCCA  809

seq1  CAGGGCCATACACATATGCTTTGGAGACAGCTGACCCCTAGAATAATGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCATACACATATGCTTTGGAGACAGCTGACCCCTAGAATAATGCC  859

seq1  ATGCTAAGTGTCTTGATTCTTGATTCTAGGACTGGTAAACATGCCTGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAGTGTCTTGATTCTTGATTCTAGGACTGGTAAACATGCCTGCTC  909

seq1  ATACACATGATGCCTGTCTTCCTTTTATCACAGTGACGAATTCTAAGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATGATGCCTGTCTTCCTTTTATCACAGTGACGAATTCTAAGGAA  959

seq1  CACAATGAGATGAAGAGGGAATTGGCTTTCATTATTATTATTATTATTGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGAGATGAAGAGGGAATTGGCTTTCATTATTATTATTATTATTGG  1009

seq1  TGGTGGTGGTGGTGGTGGTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTGGTGGTGGTGGTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTT  1059

seq1  TTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCCTGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCCTGAATTC  1109