BAC Information

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BAC

Clone NameB6Ng01-096L14
Chromosome14 (Build37)
Map Location 6,155,634 - 6,291,700
singlet/doubletdoublet
Overlap geneLOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363
Upstream gene4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299
Downstream geneLOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096L14.bB6Ng01-096L14.g
ACCDH907292DH907293
length1,121277
definitionDH907292|Mus musculus domesticus DNA, BAC clone: B6Ng01-096L14, 5' end.DH907293|Mus musculus domesticus DNA, BAC clone: B6Ng01-096L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,155,634 - 6,156,756)(6,291,424 - 6,291,700)
sequence
gaattctaactgctttattagacgtcatgtgcttttgagggggaatgttg
gttaggactgacatgcttaagagattttgttagcacccaaatctctagga
attgtggattaggtagatgtttcacaacaataaatataccagctgtgtca
attcatgtgacatacactccaatttcccagggttatcctgtctcacagag
gcaaatatctttctcctataggtttaattgtacaaaatatggacaatatt
ttctaacggtgtattccttgatacggggcatttttttcatatatatgtat
atatatatccatgagttttacaaaatctctggtttacaaccctatctttt
agaaagaaaactccctattcttttgaacatacggaatcatctacagggca
aatataaatggtaaacttgctgtcccttcttcaaaacattatcctgcaca
tgctcccgttctcaaatacaactagacaatttaagtgggcatcagagagt
aatggttatcctggactgtacattactgcattgtagcctcatagcaatta
cttctccaatatctgtcttcctgaattgctaagttgagaaatgagggtgt
tgctggttgtaacatcatactgtactcacagcaaatataatactcagaag
gtagggctgggagtgcaatgacctgagttgagatgaaacctcaattttaa
tgtgtctataaggtcaggatgctgtccctttggcattatcatctctggct
tctctgttcttatgctggctttcctgaacctgtgctataataccccccaa
ccacacagatttaagagtgaaaaatcatgtatatcttctttcagaaaaca
tctgaatttcactaccttcttgatccacacaatatcaatatgcacagctc
aaaaatcacagggagataggtgatggctgcaaagatgagggctttttctt
acaattagggcacatatttttttccaatatgatttttcctttcctctttc
actaaaggtggcttgtgtgttgctggcctaaagggttctggttccaacaa
catgggggcttactcatacaggcctcaatttacaagaaaagaattgtgta
gaattcatgtccgttacagca
cactgcaccttttttctatgcagtactgggaactaaatccagagcttcat
gcatactagcaaagcagtataccagtgagctgcctccccagcccaaactg
ttctgcactgttcactgcctgccaaacaggggcatgaccccggggacctt
caatgggaactaaagtgagtgggcttgttctaatgataatattcacattg
caagtatttaataactatgcagtcactcatgaaaagatatttgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_6155634_6156756
seq2: B6Ng01-096L14.b_47_1167

seq1  GAATTCTAACTGCTTTATTAGACGTCATGTGCTTTTGAGGGGGAATGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTGCTTTATTAGACGTCATGTGCTTTTGAGGGGGAATGTTG  50

seq1  GTTAGGACTGACATGCTTAAGAGATTTTGTTAGCACCCAAATCTCTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGACTGACATGCTTAAGAGATTTTGTTAGCACCCAAATCTCTAGGA  100

seq1  ATTGTGGATTAGGTAGATGTTTCACAACAATAAATATACCAGCTGTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGATTAGGTAGATGTTTCACAACAATAAATATACCAGCTGTGTCA  150

seq1  ATTCATGTGACATACACTCCAATTTCCCAGGGTTATCCTGTCTCACAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTGACATACACTCCAATTTCCCAGGGTTATCCTGTCTCACAGAG  200

seq1  GCAAATATCTTTCTCCTATAGGTTTAATTGTACAAAATATGGACAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATCTTTCTCCTATAGGTTTAATTGTACAAAATATGGACAATATT  250

seq1  TTCTAACGGTGTATTCCTTGATACGGGGCATTTTTTTCATATATATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACGGTGTATTCCTTGATACGGGGCATTTTTTTCATATATATGTAT  300

seq1  ATATATATCCATGAGTTTTACAAAATCTCTGGTTTACAACCCTATCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCCATGAGTTTTACAAAATCTCTGGTTTACAACCCTATCTTTT  350

seq1  AGAAAGAAAACTCCCTATTCTTTTGAACATACGGAATCATCTACAGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAACTCCCTATTCTTTTGAACATACGGAATCATCTACAGGGCA  400

seq1  AATATAAATGGTAAACTTGCTGTCCCTTCTTCAAAACATTATCCTGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAATGGTAAACTTGCTGTCCCTTCTTCAAAACATTATCCTGCACA  450

seq1  TGCTCCCGTTCTCAAATACAACTAGACAATTTAAGTGGGCATCAGAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCGTTCTCAAATACAACTAGACAATTTAAGTGGGCATCAGAGAGT  500

seq1  AATGGTTATCCTGGACTGTACATTACTGCATTGTAGCCTCATAGCAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTATCCTGGACTGTACATTACTGCATTGTAGCCTCATAGCAATTA  550

seq1  CTTCTCCAATATCTGTCTTCCTGAATTGCTAAGTTGAGAAATGAGGGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAATATCTGTCTTCCTGAATTGCTAAGTTGAGAAATGAGGGTGT  600

seq1  TGCTGGTTGTAACATCATACTGTACTCACAGCAAATATAATACTCAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTTGTAACATCATACTGTACTCACAGCAAATATAATACTCAGAAG  650

seq1  GTAGGGCTGGGAGTGCAATGACCTGAGTTGAGATGAAACCTCAATTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGCTGGGAGTGCAATGACCTGAGTTGAGATGAAACCTCAATTTTAA  700

seq1  TGTGTCTATAAGGTCAGGATGCTGTCCCTTTGGCATTATCATCTCTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTATAAGGTCAGGATGCTGTCCCTTTGGCATTATCATCTCTGGCT  750

seq1  TCTCTGTTCTTATGCTGGCTTTCCTGAACCTGTGCTATAATACCCCCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTCTTATGCTGGCTTTCCTGAACCTGTGCTATAATACCCCCCAA  800

seq1  CCACACAGATTTAAGAGTGAAAAATCATGTATATCTTCTTTCAGAAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGATTTAAGAGTGAAAAATCATGTATATCTTCTTTCAGAAAACA  850

seq1  TCTGAATTTCACTACCTTCTTGATCCACACAATATCAATATGCACAGCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTCACTACCTTCTTGATCCACACAATATCAATATGCACAGCTC  900

seq1  AAAAATCACAGGGAGATAGGTGATGGCTGCAAAGATGAGGGCTTTTTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCACAGGGAGATAGGTGATGGCTGCAAAGATGAGGGCTTTTTCTT  950

seq1  ACAATTAGGGCACATATTTTTTTCCAATATGATTTTTTCCTTTCCTCTTT  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAATTAGGGCACATATTTTTTTCCAATATGA-TTTTTCCTTTCCTCTTT  999

seq1  CACTAAGGGTGGCTTGTGTGTTTGCTGGCCTAAAGGGTCCTGGTTCCAAC  1050
      |||||| ||||||||||||| ||||||||||||||||| |||||||||||
seq2  CACTAAAGGTGGCTTGTGTG-TTGCTGGCCTAAAGGGTTCTGGTTCCAAC  1048

seq1  AACAT-GGGGCTTACTCTATACAGG-CTCAATTTTACCAAGAAAAGGATT  1098
      ||||| ||||||||||| ||||||| ||||||||   ||||||||| |||
seq2  AACATGGGGGCTTACTC-ATACAGGCCTCAATTT--ACAAGAAAAGAATT  1095

seq1  GTTGTAGAA-TCATG-CCGTGACAGCA  1123
      | ||||||| ||||| |||| ||||||
seq2  G-TGTAGAATTCATGTCCGTTACAGCA  1121

seq1: chr14_6291424_6291700
seq2: B6Ng01-096L14.g_76_352 (reverse)

seq1  CACACACACACACACACACACACACACACACACACAAATATCTTTTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAAATATCTTTTCATG  50

seq1  AGTGACTGCATAGTTATTAAATACTTGCAATGTGAATATTATCATTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGCATAGTTATTAAATACTTGCAATGTGAATATTATCATTAGAA  100

seq1  CAAGCCCACTCACTTTAGTTCCCATTGAAGGTCCCCGGGGTCATGCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCACTCACTTTAGTTCCCATTGAAGGTCCCCGGGGTCATGCCCCT  150

seq1  GTTTGGCAGGCAGTGAACAGTGCAGAACAGTTTGGGCTGGGGAGGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCAGGCAGTGAACAGTGCAGAACAGTTTGGGCTGGGGAGGCAGCT  200

seq1  CACTGGTATACTGCTTTGCTAGTATGCATGAAGCTCTGGATTTAGTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTATACTGCTTTGCTAGTATGCATGAAGCTCTGGATTTAGTTCCC  250

seq1  AGTACTGCATAGAAAAAAGGTGCAGTG  277
      |||||||||||||||||||||||||||
seq2  AGTACTGCATAGAAAAAAGGTGCAGTG  277