BAC Information

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BAC

Clone NameB6Ng01-097E06
Chromosome14 (Build37)
Map Location 79,998,126 - 79,999,186
singlet/doubletsinglet
Overlap geneSugt1
Upstream geneDgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560
Downstream geneLect1, Pcdh8, EG629734, Olfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097E06.bB6Ng01-097E06.g
ACCDH907686DH907687
length9231,051
definitionDH907686|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E06, 5' end.DH907687|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaaaatgtttggccttgaattttttctagtgttaga
agcccttttgttccttttcacatgttatcaagtggttaaggcagggagga
ttctagaggaaattcaggacaagctatcagaagtaaagtggggagagaga
gtaggaacaaagaggaaatatggtacacaaaataagtatacaggcctttc
caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga
gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta
gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg
ggagccagctcttagtagctctgaagcagatgaagaattctcctctgaag
aaacagactgggaggaagaagcagctcattatgagaaaaaagggtaccag
ccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctggcga
aggccagtttgctgattggcctcagggcagtcggcttcaaggtccgccct
atgcggagcccccgccctgcgtagtgcgtcagcaatgcgcagagaggcaa
tgcgcagagagatgcgcagagaggcagtgcgcagagaggcagtgcgcaga
ctcattcatttcccagagaggaacaaaggaaaatacaacaggcatttcca
gtctttgaaggagccgagggtgggcgtgtccacgctcccggtagaatact
tacagattaagagcttgccgagtcggtccgtaatatggaaccaatgctaa
ttttacctgggtgcagttagaca
gaattcatctccatatagatctcccaccccatgagctcttgtgtaggaat
gtttgttgagtgttgagtacatgcagcaaccagaggttaacttcaggggg
cattacttagcaactgtctttggtttttgtgatggagcctggcttgctct
attaggctaggctgccaggccagcaagcttcaggtatctacatatctttg
cctccccagtgctgggattccagctcacaccgctctacctggcttttcac
tgtgggtcccatgtgctgtgggtcccatggaggcccttctgcttgccggg
cacacactgtaccaactgagttgtctctccagagtgtggctgtgttttct
actgggaaagagaaattttaattcactttcatgttcaaaaataagttagt
ggggcaagagagatggctcagaggttaagaactctggttgctcttccaga
ggtcccagatttgattcctagcactcacatggtagctcacaattgtgtgt
agcccccattccaggggatcccacagcctctcctggtctttgagggcacc
agatgcaaacaaggtatatagacatacatacctgtatacataaaataata
aaaaaatttaagtgttcattttaagttattcagattgctaggagatttta
ccctagtaaattattaatttttagaacattgtgagatatagaagaaaatg
agaactttctgtttttttagacagtcatatatttaactcattatggagct
gagggtggccttgactttgtgaccttcctgccattaccccatggagtgct
aggttactggcagacaccaagtatactgcgtttgtatgggagtgggtaac
aaacccagggcttcctgcagacataaccagttagattcttaggcaaaata
ctttgaaagtgtaggctttctcaaatgtccatgtttgagagtgtgtgtga
catatcatgattccaggatctagtgcatagagagatgatgagggctggag
atcacaaggtagattttatttgttagtggaagatgatagaaacttctaat
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79998126_79999186
seq2: B6Ng01-097E06.g_71_1121

seq1  GAATTCATCTCCATATAGATCTCCCACCCCATGAGCTCTTGTGTAGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCCATATAGATCTCCCACCCCATGAGCTCTTGTGTAGGAAT  50

seq1  GTTTGTTGAGTGTTGAGTACATGCAGCAACCAGAGGTTAACTTCAGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGAGTGTTGAGTACATGCAGCAACCAGAGGTTAACTTCAGGGGG  100

seq1  CATTACTTAGCAACTGTCTTTGGTTTTTGTGATGGAGCCTGGCTTGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTTAGCAACTGTCTTTGGTTTTTGTGATGGAGCCTGGCTTGCTCT  150

seq1  ATTAGGCTAGGCTGCCAGGCCAGCAAGCTTCAGGTATCTACATATCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCTAGGCTGCCAGGCCAGCAAGCTTCAGGTATCTACATATCTTTG  200

seq1  CCTCCCCAGTGCTGGGATTCCAGCTCACACCGCTCTACCTGGCTTTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCAGTGCTGGGATTCCAGCTCACACCGCTCTACCTGGCTTTTCAC  250

seq1  TGTGGGTCCCATGTGCTGTGGGTCCCATGGAGGCCCTTCTGCTTGCCGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTCCCATGTGCTGTGGGTCCCATGGAGGCCCTTCTGCTTGCCGGG  300

seq1  CACACACTGTACCAACTGAGTTGTCTCTCCAGAGTGTGGCTGTGTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTGTACCAACTGAGTTGTCTCTCCAGAGTGTGGCTGTGTTTTCT  350

seq1  ACTGGGAAAGAGAAATTTTAATTCACTTTCATGTTCAAAAATAAGTTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAAAGAGAAATTTTAATTCACTTTCATGTTCAAAAATAAGTTAGT  400

seq1  GGGGCAAGAGAGATGGCTCAGAGGTTAAGAACTCTGGTTGCTCTTCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAAGAGAGATGGCTCAGAGGTTAAGAACTCTGGTTGCTCTTCCAGA  450

seq1  GGTCCCAGATTTGATTCCTAGCACTCACATGGTAGCTCACAATTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCAGATTTGATTCCTAGCACTCACATGGTAGCTCACAATTGTGTGT  500

seq1  AGCCCCCATTCCAGGGGATCCCACAGCCTCTCCTGGTCTTTGAGGGCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCATTCCAGGGGATCCCACAGCCTCTCCTGGTCTTTGAGGGCACC  550

seq1  AGATGCAAACAAGGTATATAGACATACATACCTGTATACATAAAATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAAACAAGGTATATAGACATACATACCTGTATACATAAAATAATA  600

seq1  AAAAAATTTAAGTGTTCATTTTAAGTTATTCAGATTGCTAGGAGATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTTAAGTGTTCATTTTAAGTTATTCAGATTGCTAGGAGATTTTA  650

seq1  CCCTAGTAAATTATTAATTTTTAGAACATTGTGAGATATAGAAGAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGTAAATTATTAATTTTTAGAACATTGTGAGATATAGAAGAAAATG  700

seq1  AGAACTTTCTGTTTTTTTAGACAGTCATATATTTAACTCATTATGGAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTTCTGTTTTTTTAGACAGTCATATATTTAACTCATTATGGAGCT  750

seq1  GAGGGTGGCCTTGACTTTGTGACCTTCCTGCCATTACCCCATGGAGTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGGCCTTGACTTTGTGACCTTCCTGCCATTACCCCATGGAGTGCT  800

seq1  AGGTTACTGGCAGACACC-AGTATACTGCGTTTGTATGGGAGTGGGTAAC  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGGTTACTGGCAGACACCAAGTATACTGCGTTTGTATGGGAGTGGGTAAC  850

seq1  AAACCCAGGGCTTCCTGCAGACATATCCAGTTAGATTCTTAGGCAAAAAT  899
      ||||||||||||||||||||||||| |||||||||||||||||| |||||
seq2  AAACCCAGGGCTTCCTGCAGACATAACCAGTTAGATTCTTAGGC-AAAAT  899

seq1  ACCTTTGAAAGTGTTAGGCTTTCTCCAAATGTCCATGTTTGAGAAGTGTG  949
      | ||||||||||| |||||||||| |||||||||||||||||| ||||||
seq2  A-CTTTGAAAGTG-TAGGCTTTCT-CAAATGTCCATGTTTGAG-AGTGTG  945

seq1  TGTGAACATTATCATGATTCCAGGATCTAGTTGCATAGAGAGATGATGAG  999
      |||| ||| ||||||||||||||||||||| |||||||||||||||||||
seq2  TGTG-ACA-TATCATGATTCCAGGATCTAG-TGCATAGAGAGATGATGAG  992

seq1  GGCTGGAGAACTACAAGGTAGATTTTATATGTAAGTAGAAGATGATAGGA  1049
      ||||||||| | |||||||||||||||| ||| ||| |||||||||| ||
seq2  GGCTGGAGATC-ACAAGGTAGATTTTATTTGTTAGTGGAAGATGATA-GA  1040

seq1  AACTTCATAATC  1061
      |||||| |||||
seq2  AACTTC-TAATC  1051