BAC Information

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BAC

Clone NameB6Ng01-099O10
Chromosome14 (Build37)
Map Location 80,262,426 - 80,403,730
singlet/doubletdoublet
Overlap geneEG629734, Olfm4
Upstream gene1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099O10.bB6Ng01-099O10.g
ACCDH909564DH909565
length1,2111,089
definitionDH909564|Mus musculus domesticus DNA, BAC clone: B6Ng01-099O10, 5' end.DH909565|Mus musculus domesticus DNA, BAC clone: B6Ng01-099O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,402,488 - 80,403,730)(80,262,426 - 80,263,417)
sequence
gaattcaaagacaatgaagctaatggtgatgagtctctcttcagtgaatg
cttaaactacatgagtgaagcgtgggaatgggatgcaaagacaagtgctt
gtcctcttggcctttgaaaggatgcatgatcctcttgtggagggcaagta
gaaccctttgggccccacaagagtgactgtactacaaagttcgaactcgg
aatgtattcagttaacagttactaaggtctataataccccatgctctgga
attaaaagttgattaagaccaattctggctcagtcaggctcactttcatt
ctgaatgccctagggacttttccaacagcttcataccctgatggcaaagg
cacccagaccattgtggttccaaaactgccagtgactctgaggagccttc
ccgacatctgtgagaagaagcggccacttctttggaggcacgcatggcat
tgtgagccctccagcagacggtgtgactcacattggtgatttaaggtcgc
aattggctctaattagcagccaagtctaagtgcccacaaagattcacgac
gtaaaataatagtactccactttcagaagtacagaaaatgatacgtttgg
aacttgctcaatgacagttataaaagggttttccactactttccaacaag
ctcatcaagctgacagccagccctagaaaattaggtttatagtggaattg
acacctggtccactataaaaggaggttgatgcctgactcactcaccccaa
gcagataagcaaacaaggaaggaaattggagcctctaagtacaatttaac
tactagttcttacctacttttaaatatttgccttcttactagacagtggg
cacttcgaattcctctgttcctcactgatattttattttctattattgca
gttgatgatgttacacggaaatgctggcttttgattggttgtgaaccttt
ttgacaattcttaacacatctacagaaataaaatagcccgttctgattgt
tcccagaatgtttagtacccaagataagatttttgctactgagaagcgta
tgactgtgattctctaaacttgatcctttaagacatttcatctggtgcct
ggaaccagaaacctgcatgcaatggattttccaccaggctctgaaatggt
taactgatgaaaacttaaggtattagaatgatgatcctgggaggtaatgt
gttccagggga
gaattcacgcagttgaatccttctcaacagtctgttttatgggaacactt
cattaccatgacccgcagttctggttccggaatgagggatcttccttgcg
ccggtgatggtaaccgtcccaggttttctcgtcccaggtcttctcgtccg
gggtcttctcgtcccaggtcttctcgtcccgggtttcggcaccaactctt
acatgcgttctcgtgaccggccaggaaagacacaacaaaccggaatcttc
tgcggcaaaagctttattgcttacatcttcaggagccagagagcaagaga
gcaagagcaagaaaaagaacaagagcaagatagcaagagcaagagagaga
aaaagcaagaacaagagagagagagaaaatggcaaaaccccgtccctttt
aaggagaattatcctccgcctaggatgtattactccctgattggctgcag
cccatcggcccagttgtcatcacgagaaaggcagaacacatggcgggaaa
actgcccctgcacgtgtgcagattatgtttaccacttagaacacagctgt
cagcgccatcttataatggcaaatgtgagggcggctcccaacacccaggt
aggagtatgtgcagaacaattcagttggtgaaaaacgctgatgtgcctga
agttaagtgaatgctggaagaggggatgatggtgcaggagtctggaaaag
caggcaagagccagaccaggcagggacttgcaggtgacagcagggctctg
gatgtggattgtggatagcaaagggaggcagctctgaaagtttgtgcata
cacactgtgagctcatgcctgtgcacatgcattgtccagatgccctgaat
ccaagtgtaacaaggtgcatgttcagagctgaaccacagttgaagcagga
gctttcaattttgatggcctacgttgatcatctggaaggcactggggagg
tgagaagtgaggacagggatgacttggtttctgggtcgtgggggcaggct
tatggtggcgatggtgatgttgtcattctctgaagaaatgatcagggaag
aaagtgcagttctctagggaaggtcttcagttgagtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80402488_80403730
seq2: B6Ng01-099O10.b_48_1258 (reverse)

seq1  TCCCCTGGGACATTTTACCTCCCA-GATCAATCCATTC--ATACACTTTA  47
      |||||||| |||  |||||||||| |||||   |||||  |||| ||| |
seq2  TCCCCTGGAACACATTACCTCCCAGGATCA--TCATTCTAATAC-CTTAA  47

seq1  GTTGTTTCATTCAGGTTTTAACTCATTTCAAAGGAGCCTGTTGTGAAAAC  97
      ||  ||||| ||||   ||||| |||||||   ||||||| ||  ||| |
seq2  GT--TTTCA-TCAG---TTAAC-CATTTCA---GAGCCTGGTGGAAAATC  87

seq1  CATCCCACTGCATGCAGCGTTCTGTGTTTCCAGGGCACAGATGAAAATTG  147
      |||     |||||||||  |||  || |||||||   |||||||||  ||
seq2  CAT-----TGCATGCAGGTTTC--TGGTTCCAGGCACCAGATGAAA--TG  128

seq1  TCTTTAAAAGGGGATCAAGTTTAGAGAATCACAGTCATACCGGCTTCTCA  197
      |||| ||    |||||||||||||||||||||||||||||  ||||||||
seq2  TCTTAAA----GGATCAAGTTTAGAGAATCACAGTCATAC--GCTTCTCA  172

seq1  GTAGCCAAAAATCTTATCTTGGGGTACTAAACAATTTCTGGGGACAATCA  247
      |||| ||||||||||||||| ||||||||||||  ||||||| |||||||
seq2  GTAG-CAAAAATCTTATCTT-GGGTACTAAACA--TTCTGGGAACAATCA  218

seq1  GAACGGGCTATTTTATTTCTGTTAGATGTGGTTAAGAATTTGTCAAAAAG  297
      ||||||||||||||||||||| ||||||| |||||||| |||||||||||
seq2  GAACGGGCTATTTTATTTCTG-TAGATGT-GTTAAGAA-TTGTCAAAAAG  265

seq1  GTTCACAACCAATCAAAAGCCAGCATTTCCGTGTAACATCATCAACTGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACAACCAATCAAAAGCCAGCATTTCCGTGTAACATCATCAACTGCA  315

seq1  ATAATAGAAAATAAAATATCAGTGAGGAACAGAGGAATTCGAAGTGCCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGAAAATAAAATATCAGTGAGGAACAGAGGAATTCGAAGTGCCCA  365

seq1  CTGTCTAGTAAGAAGGCAAATATTTAAAAGTAGGTAAGAACTAGTAGTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAGTAAGAAGGCAAATATTTAAAAGTAGGTAAGAACTAGTAGTTA  415

seq1  AATTGTACTTAGAGGCTCCAATTTCCTTCCTTGTTTGCTTATCTGCTTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACTTAGAGGCTCCAATTTCCTTCCTTGTTTGCTTATCTGCTTGG  465

seq1  GGTGAGTGAGTCAGGCATCAACCTCCTTTTATAGTGGACCAGGTGTCAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTGAGTCAGGCATCAACCTCCTTTTATAGTGGACCAGGTGTCAAT  515

seq1  TCCACTATAAACCTAATTTTCTAGGGCTGGCTGTCAGCTTGATGAGCTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTATAAACCTAATTTTCTAGGGCTGGCTGTCAGCTTGATGAGCTTG  565

seq1  TTGGAAAGTAGTGGAAAACCCTTTTATAACTGTCATTGAGCAAGTTCCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGTAGTGGAAAACCCTTTTATAACTGTCATTGAGCAAGTTCCAA  615

seq1  ACGTATCATTTTCTGTACTTCTGAAAGTGGAGTACTATTATTTTACGTCG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATCATTTTCTGTACTTCTGAAAGTGGAGTACTATTATTTTACGTCG  665

seq1  TGAATCTTTGTGGGCACTTAGACTTGGCTGCTAATTAGAGCCAATTGCGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTTGTGGGCACTTAGACTTGGCTGCTAATTAGAGCCAATTGCGA  715

seq1  CCTTAAATCACCAATGTGAGTCACACCGTCTGCTGGAGGGCTCACAATGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATCACCAATGTGAGTCACACCGTCTGCTGGAGGGCTCACAATGC  765

seq1  CATGCGTGCCTCCAAAGAAGTGGCCGCTTCTTCTCACAGATGTCGGGAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGTGCCTCCAAAGAAGTGGCCGCTTCTTCTCACAGATGTCGGGAAG  815

seq1  GCTCCTCAGAGTCACTGGCAGTTTTGGAACCACAATGGTCTGGGTGCCTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCAGAGTCACTGGCAGTTTTGGAACCACAATGGTCTGGGTGCCTT  865

seq1  TGCCATCAGGGTATGAAGCTGTTGGAAAAGTCCCTAGGGCATTCAGAATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCAGGGTATGAAGCTGTTGGAAAAGTCCCTAGGGCATTCAGAATG  915

seq1  AAAGTGAGCCTGACTGAGCCAGAATTGGTCTTAATCAACTTTTAATTCCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGCCTGACTGAGCCAGAATTGGTCTTAATCAACTTTTAATTCCA  965

seq1  GAGCATGGGGTATTATAGACCTTAGTAACTGTTAACTGAATACATTCCGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGGGGTATTATAGACCTTAGTAACTGTTAACTGAATACATTCCGA  1015

seq1  GTTCGAACTTTGTAGTACAGTCACTCTTGTGGGGCCCAAAGGGTTCTACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGAACTTTGTAGTACAGTCACTCTTGTGGGGCCCAAAGGGTTCTACT  1065

seq1  TGCCCTCCACAAGAGGATCATGCATCCTTTCAAAGGCCAAGAGGACAAGC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCCACAAGAGGATCATGCATCCTTTCAAAGGCCAAGAGGACAAGC  1115

seq1  ACTTGTCTTTGCATCCCATTCCCACGCTTCACTCATGTAGTTTAAGCATT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCTTTGCATCCCATTCCCACGCTTCACTCATGTAGTTTAAGCATT  1165

seq1  CACTGAAGAGAGACTCATCACCATTAGCTTCATTGTCTTTGAATTC  1243
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGAGAGACTCATCACCATTAGCTTCATTGTCTTTGAATTC  1211

seq1: chr14_80262426_80263417
seq2: B6Ng01-099O10.g_162_1156

seq1  CTTGCGCCGGTGATGGTAACCGTCCCAGGTTTTCTCGTCCCAGGTCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGCCGGTGATGGTAACCGTCCCAGGTTTTCTCGTCCCAGGTCTTCT  50

seq1  CGTCCGGGGTCTTCTCGTCCCAGGTCTTCTCGTCCCGGGTTTCGGCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCGGGGTCTTCTCGTCCCAGGTCTTCTCGTCCCGGGTTTCGGCACCA  100

seq1  ACTCTTACATGCGTTCTCGTGACCGGCCAGGAAAGACACAACAAACCGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTACATGCGTTCTCGTGACCGGCCAGGAAAGACACAACAAACCGGA  150

seq1  ATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGC  200

seq1  AAGAGAGCAAGAGCAAGAAAAAGAACAAGAGCAAGATAGCAAGAGCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCAAGAGCAAGAAAAAGAACAAGAGCAAGATAGCAAGAGCAAGA  250

seq1  GAGAGAAAAAGCAAGAACAAGAGAGAGAGAGAAAATGGCAAAACCCCGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAAAGCAAGAACAAGAGAGAGAGAGAAAATGGCAAAACCCCGTC  300

seq1  CCTTTTAAGGAGAATTATCCTCCGCCTAGGATGTATTACTCCCTGATTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAGGAGAATTATCCTCCGCCTAGGATGTATTACTCCCTGATTGG  350

seq1  CTGCAGCCCATCGGCCCAGTTGTCATCACGAGAAAGGCAGAACACATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCCATCGGCCCAGTTGTCATCACGAGAAAGGCAGAACACATGGC  400

seq1  GGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACAC  450

seq1  AGCTGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCCAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCCAACAC  500

seq1  CCAGGTAGGAGTATGTGCAGAACAATTCAGTTGGTGAAAAACGCTGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAGGAGTATGTGCAGAACAATTCAGTTGGTGAAAAACGCTGATGT  550

seq1  GCCTGAAGTTAAGTGAATGCTGGAAGAGGGGATGATGGTGCAGGAGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGTTAAGTGAATGCTGGAAGAGGGGATGATGGTGCAGGAGTCTG  600

seq1  GAAAAGCAGGCAAGAGCCAGACCAGGCAGGGACTTGCAGGTGACAGCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGGCAAGAGCCAGACCAGGCAGGGACTTGCAGGTGACAGCAGG  650

seq1  GCTCTGGATGTGGATTGTGGATAGCAAAGGGAGGCAGCTCTGAAAGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGATGTGGATTGTGGATAGCAAAGGGAGGCAGCTCTGAAAGTTTG  700

seq1  TGCATACACACTGTGAGCTCATGCCTGTGCACATGCATTGTCCAGATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACACACTGTGAGCTCATGCCTGTGCACATGCATTGTCCAGATGCC  750

seq1  CTGAATCCAAGTGTAACAAGGTGCATGTTCAGAGCTGAACCACAGTTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCCAAGTGTAACAAGGTGCATGTTCAGAGCTGAACCACAGTTGAA  800

seq1  GCAAGAGCTTTCAA-TTTGATGGCCTACGTTGATCATCTGGAAGGCACT-  848
      ||| |||||||||| |||||||||||||||||||||||||||||||||| 
seq2  GCAGGAGCTTTCAATTTTGATGGCCTACGTTGATCATCTGGAAGGCACTG  850

seq1  GGGAGGTGAGAAGTGAGGACAGGGATGACTTGGTTTCTGGTTCGT-GGGG  897
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  GGGAGGTGAGAAGTGAGGACAGGGATGACTTGGTTTCTGGGTCGTGGGGG  900

seq1  CAGGCTTCATGGTGGCGATGGTGATGTTGTTCATTCTCTG-AGAAAGAAC  946
      ||||||| ||||||||||||||||||||| |||||||||| |||||  | 
seq2  CAGGCTT-ATGGTGGCGATGGTGATGTTG-TCATTCTCTGAAGAAATGAT  948

seq1  CAGGGAGGAAAGTGCAGTTCTC-AGGGAAGGTCTCAAGTTGAGTCTC  992
      |||||| ||||||||||||||| |||||||||||  |||||||||||
seq2  CAGGGAAGAAAGTGCAGTTCTCTAGGGAAGGTCTTCAGTTGAGTCTC  995