BAC Information

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BAC

Clone NameB6Ng01-100C03
Chromosome14 (Build37)
Map Location 97,847,171 - 97,994,665
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1, LOC635593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100C03.bB6Ng01-100C03.g
ACCDH909722DH909723
length1,0911,105
definitionDH909722|Mus musculus domesticus DNA, BAC clone: B6Ng01-100C03, 5' end.DH909723|Mus musculus domesticus DNA, BAC clone: B6Ng01-100C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,993,566 - 97,994,665)(97,847,171 - 97,848,501)
sequence
gaattctttgtatatattgtatatttaaaattatttgtagacctacatga
ttctacccaagtttttcaaccttcaggcatcaaaatttcccaatttaata
acttccatcccataagataattatgatatttgatattataagaagcagat
gtcagcctgttgaaattgaaagtgttcatttgcctgtttggaaatgtaaa
tgaaggaaatacctattaaattaaaaaagaaaccttaaaaaaggagaaat
agaaaatgtttcttaacaataatagatgtttctaaactccaccttagctg
attttattcaagttcatggattaaaatattaaatacaatgaagaaaatgt
ctaaactttataatgataatacttaaagccctttcttaagttgttttatt
ttactgtagcttctttgtcacttgagagctcagcttaatgataaaaaaga
gagttcatgatttctgaacaatgaatccttctcagaattcattcctgcaa
gtttctcactgtgcaacctatctatttacctgatgataatcttttttttt
tcattgcctctgcaactagttacttttctgtaatttagttgtttatgtgt
ttgtttctcatgtacggtatcccgacttcatcagtttcctctccactctt
tctccttctcccctggccgccagatccactctggcatttccactgaaaaa
agggcaggcctcctagagatatcaactgaatctggcataacgaggtataa
aaagactaggcacttactctcttatcatagctgaataaggcaactctgta
ggaagataagtgtcccaagatcagacaaaaatcaaagacatcctgactcc
cactgacaggacccccagtagtacatcaacctacataacatagcatatat
gcagaggatctggcttctgagccatccaggctccatgattatcactttgg
tatctgtgagtccctatgagtactacttagttgattctagggtcatgctc
ttctggagcttcaacttctcttgctcttacaattcttctagctttattca
tgggatccaaagctcattattttggctggggatcttgcatc
gaattctatttgtcaatacagttcagagttaaccatctctagtttaaata
tgacatgtacagtagtcatccttccatatcctgaaccaaaggaagtcaga
gatggtctaatcaagagtggcaagcttcaggaaggtcagagttaagagca
aatttgtgggactcacaagtctgggtcatgagagggcgacttatgacagg
aaaataagcacatttaaagagagtgtaagaaatgagataatagtgttttc
aaaagcattgccaaatctcacaatgatacattttcatgaagcaggatata
gagtatgatggtggacattcagagtgttcacagtgaggcatgttatcctg
aaaaagaaattcagaaaaattcaggcactgggaatcagaaaacagatgcc
tcggagatagggaaaaataggttcagattaaatggaataggaatgtaatg
agccacccattaaaagcttgaatttagggacagaattgactcaaaagaat
tatgaacccacccctcaaactcaaagaaggctctaaagtcataagcaaga
ttcctaaacatatattcatttttagtcatttcaatgctattgctttgaaa
aacaaagatcactgagccagagatcagtgacgtgatgacacatttcattc
ttttgctatgaactgtgattaaatctgatgataaaacttaactttgttct
aagataatacctttcctttttctgtatcttatgaggagtttttaaagtct
ggacacccacagttagtctattagagattgtcctaagtaccattttctgt
tttctctcattctagcaggcaatgttggcactgtgctattttcccaaaga
tgtttatttttaatggacattacactggtgaatttggcaacaacaacaca
cacaacagatctgggaaggaaatgcggctgtttctatttgcaacttttgg
gcagagatacagaacttagatttactatctccgaatgcctcatctgaatg
gatttattatttttctacaacatcagaaagaatgcttttttgttcatagg
ccaaactttaacctcaggattaacggtaatcccaaaggtcttttcaactt
tgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97993566_97994665
seq2: B6Ng01-100C03.b_42_1132 (reverse)

seq1  GATGCAAAGATCCACAGCCAAAAATTAGATGGAGCTTTGGGATCCCATGG  50
      ||||| ||||||| |||||||||  || || ||||||| ||||||||| |
seq2  GATGC-AAGATCCCCAGCCAAAA--TA-AT-GAGCTTT-GGATCCCAT-G  43

seq1  AATAGAGCTAGGAAGGATTGTAAGAGCAAGAGAGGTTGAAGACTCCAGAA  100
      |||| ||||| |||| ||||||||||||||||| ||||||| ||||||||
seq2  AATAAAGCTA-GAAGAATTGTAAGAGCAAGAGAAGTTGAAG-CTCCAGAA  91

seq1  GAGCATGACCCTAGAATCAACTAAGTAGTACTCATAGGGACTCACAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGACCCTAGAATCAACTAAGTAGTACTCATAGGGACTCACAGATA  141

seq1  CCAAAGTGATAATCATGGAGCCTGGATGGCTCAG-AGCCAGATCCTCTGC  199
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCAAAGTGATAATCATGGAGCCTGGATGGCTCAGAAGCCAGATCCTCTGC  191

seq1  ATATATGCTATTGTTATGTAGGTTGATGTACTACTGGGGGTCCTGTCAGT  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCTA-TGTTATGTAGGTTGATGTACTACTGGGGGTCCTGTCAGT  240

seq1  GGGAGTCAGGATGTCTTTGATTTTTGTCTGATCTTGGGACACTTATCTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCAGGATGTCTTTGATTTTTGTCTGATCTTGGGACACTTATCTTC  290

seq1  CTACAGAGTTGCCTTATTCAGCTATGATAAGAGAGTAAGTGCCTAGTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAGTTGCCTTATTCAGCTATGATAAGAGAGTAAGTGCCTAGTCTT  340

seq1  TTTATACCTCGTTATGCCAGATTCAGTTGATATCTCTAGGAGGCCTGCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACCTCGTTATGCCAGATTCAGTTGATATCTCTAGGAGGCCTGCCC  390

seq1  TTTTTTCAGTGGAAATGCCAGAGTGGATCTGGCGGCCAGGGGAGAAGGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAGTGGAAATGCCAGAGTGGATCTGGCGGCCAGGGGAGAAGGAG  440

seq1  AAAGAGTGGAGAGGAAACTGATGAAGTCGGGATACCGTACATGAGAAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGGAGAGGAAACTGATGAAGTCGGGATACCGTACATGAGAAACA  490

seq1  AACACATAAACAACTAAATTACAGAAAAGTAACTAGTTGCAGAGGCAATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATAAACAACTAAATTACAGAAAAGTAACTAGTTGCAGAGGCAATG  540

seq1  AAAAAAAAAAGATTATCATCAGGTAAATAGATAGGTTGCACAGTGAGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGATTATCATCAGGTAAATAGATAGGTTGCACAGTGAGAAA  590

seq1  CTTGCAGGAATGAATTCTGAGAAGGATTCATTGTTCAGAAATCATGAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGAATGAATTCTGAGAAGGATTCATTGTTCAGAAATCATGAACT  640

seq1  CTCTTTTTTATCATTAAGCTGAGCTCTCAAGTGACAAAGAAGCTACAGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTTATCATTAAGCTGAGCTCTCAAGTGACAAAGAAGCTACAGTA  690

seq1  AAATAAAACAACTTAAGAAAGGGCTTTAAGTATTATCATTATAAAGTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAACAACTTAAGAAAGGGCTTTAAGTATTATCATTATAAAGTTTA  740

seq1  GACATTTTCTTCATTGTATTTAATATTTTAATCCATGAACTTGAATAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTCTTCATTGTATTTAATATTTTAATCCATGAACTTGAATAAAA  790

seq1  TCAGCTAAGGTGGAGTTTAGAAACATCTATTATTGTTAAGAAACATTTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTAAGGTGGAGTTTAGAAACATCTATTATTGTTAAGAAACATTTTC  840

seq1  TATTTCTCCTTTTTTAAGGTTTCTTTTTTAATTTAATAGGTATTTCCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCCTTTTTTAAGGTTTCTTTTTTAATTTAATAGGTATTTCCTTC  890

seq1  ATTTACATTTCCAAACAGGCAAATGAACACTTTCAATTTCAACAGGCTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTCCAAACAGGCAAATGAACACTTTCAATTTCAACAGGCTGA  940

seq1  CATCTGCTTCTTATAATATCAAATATCATAATTATCTTATGGGATGGAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTTCTTATAATATCAAATATCATAATTATCTTATGGGATGGAAG  990

seq1  TTATTAAATTGGGAAATTTTGATGCCTGAAGGTTGAAAAACTTGGGTAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAATTGGGAAATTTTGATGCCTGAAGGTTGAAAAACTTGGGTAGA  1040

seq1  ATCATGTAGGTCTACAAATAATTTTAAATATACAATATATACAAAGAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTAGGTCTACAAATAATTTTAAATATACAATATATACAAAGAATT  1090

seq1  C  1100
      |
seq2  C  1091

seq1: chr14_97847171_97848501
seq2: B6Ng01-100C03.g_70_1174

seq1  GAATTCTATTTGTCAATACAGTTCAGAGTTAACCATCTCTAGTTTAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTGTCAATACAGTTCAGAGTTAACCATCTCTAGTTTAAATA  50

seq1  TGACATGTACAGTAGTCATCCTTCCATATCCTGAACCAAAGGAAGTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGTACAGTAGTCATCCTTCCATATCCTGAACCAAAGGAAGTCAGA  100

seq1  GATGGTCTAATCAAGAGTGGCAAGCTTCAGGAAGGTCAGAGTTAAGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCTAATCAAGAGTGGCAAGCTTCAGGAAGGTCAGAGTTAAGAGCA  150

seq1  AATTTGTGGGACTCACAAGTCTGGGTCATGAGAGGGCGACTTATGACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGGGACTCACAAGTCTGGGTCATGAGAGGGCGACTTATGACAGG  200

seq1  AAAATAAGCACATTTAAAGAGAGTGTAAGAAATGAGATAATAGTGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGCACATTTAAAGAGAGTGTAAGAAATGAGATAATAGTGTTTTC  250

seq1  AAAAGCATTGCCAAATCTCACAATGATACATTTTCATGAAGCAGGATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATTGCCAAATCTCACAATGATACATTTTCATGAAGCAGGATATA  300

seq1  GAGTATGATGGTGGACATTCAGAGTGTTCACAGTGAGGCATGTTATCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGATGGTGGACATTCAGAGTGTTCACAGTGAGGCATGTTATCCTG  350

seq1  AAAAAGAAATTCAGAAAAATTCAGGCACTGGGAATCAGAAAACAGATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAATTCAGAAAAATTCAGGCACTGGGAATCAGAAAACAGATGCC  400

seq1  TCGGAGATAGGGAAAAATAGGTTCAGATTAAATGGAATAGGAATGTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGATAGGGAAAAATAGGTTCAGATTAAATGGAATAGGAATGTAATG  450

seq1  AGCCACCCATTAAAAGCTTGAATTTAGGGACAGAATTGACTCAAAAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCCATTAAAAGCTTGAATTTAGGGACAGAATTGACTCAAAAGAAT  500

seq1  TATGAACCCACCCCTCAAACTCAAAGAAGGCTCTAAAGTCATAAGCAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACCCACCCCTCAAACTCAAAGAAGGCTCTAAAGTCATAAGCAAGA  550

seq1  TTCCTAAACATATATTCATTTTTAGTCATTTCAATGCTATTGCTTTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAACATATATTCATTTTTAGTCATTTCAATGCTATTGCTTTGAAA  600

seq1  AACAAAGATCACTGAGCCAGAGATCAGTGACGTGATGACACATTTCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGATCACTGAGCCAGAGATCAGTGACGTGATGACACATTTCATTC  650

seq1  TTTTGCTATGAACTGTGATTAAATCTGATGATAAAACTTAACTTTGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTATGAACTGTGATTAAATCTGATGATAAAACTTAACTTTGTTCT  700

seq1  AAGATAATACC-TTCCTTTTTCTGTATCTTATGAGGAGTTTTTAAAGTCT  749
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATACCTTTCCTTTTTCTGTATCTTATGAGGAGTTTTTAAAGTCT  750

seq1  GGACACCCACAGTTAGTCTATTAGAGATTGTCCTAAGTACCATTTTCTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCCACAGTTAGTCTATTAGAGATTGTCCTAAGTACCATTTTCTGT  800

seq1  TTTCTCTCATTCTAGCAGGCAATGTTGGCACTGTGCTATTTTCCCAAAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCATTCTAGCAGGCAATGTTGGCACTGTGCTATTTTCCCAAAGA  850

seq1  TGTT--ATTTTAATGGACATTACACTGGTGAATTTGGCAACAACAACACA  897
      ||||   |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTTTAATGGACATTACACTGGTGAATTTGGCAACAACAACACA  900

seq1  CACAACAGATCTGGG-AGGAAATGCGGCTGTTTCTA-TTGCAACTTTT-G  944
      ||||||||||||||| |||||||||||||||||||| ||||||||||| |
seq2  CACAACAGATCTGGGAAGGAAATGCGGCTGTTTCTATTTGCAACTTTTGG  950

seq1  GCAGAGATACAGAACTTAGATTTACTATCCCCGAATGCCTCATCTGAATT  994
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  GCAGAGATACAGAACTTAGATTTACTATCTCCGAATGCCTCATCTGAATG  1000

seq1  GATTTTATTA-TTTTCTACAACA-CAGAAAG-ATGCTTTTTGTGTCCATA  1041
      || ||||||| |||||||||||| ||||||| ||||||||| ||| ||||
seq2  GA-TTTATTATTTTTCTACAACATCAGAAAGAATGCTTTTT-TGTTCATA  1048

seq1  GGCCAAACTTTAA-CTCATGA-TCACCGTTATCCCAAAGGTC-TTTCTAC  1088
      ||||||||||||| |||| || | || || |||||||||||| |||| ||
seq2  GGCCAAACTTTAACCTCAGGATTAACGGTAATCCCAAAGGTCTTTTCAAC  1098

seq1  TTT--AGATGCTTCTGGTCCTTAATGCTCCTGCAAGCACTTTAATACAAT  1136
      |||  ||                                           
seq2  TTTGAAG-------------------------------------------  1105

seq1  CATATAAAAAGAAAGAAAGTCACAACAAATGTTTGCCTTGCCTTGCTCCT  1186
                                                        
seq2  --------------------------------------------------  1105

seq1  ACTCCAATGTATGCTTTAGGGATGTTTTTGATGCCAAATTCAGTGCCTTT  1236
                                                        
seq2  --------------------------------------------------  1105

seq1  GGAGTGGATCCCTAAAGACTTCTGAGCTTTCTACTCTATCTCTTTGAATA  1286
                                                        
seq2  --------------------------------------------------  1105

seq1  AATGAGACAGTTAGAATTGGCAAGACTAGTTCCTCAACTTTGAAG  1331
                                                   
seq2  ---------------------------------------------  1105