BAC Information

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BAC

Clone NameB6Ng01-101I13
Chromosome14 (Build37)
Map Location 122,041,806 - 122,184,518
singlet/doubletdoublet
Overlap geneDock9
Upstream geneLOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577
Downstream geneLOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101I13.bB6Ng01-101I13.g
ACCDH910689DH910690
length165697
definitionDH910689|Mus musculus domesticus DNA, BAC clone: B6Ng01-101I13, 5' end.DH910690|Mus musculus domesticus DNA, BAC clone: B6Ng01-101I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,041,806 - 122,041,970)(122,183,822 - 122,184,518)
sequence
tatttttcaaatggctaaaattgtaaggtttgtgctataggcatgctacc
acagtaaacggtgtacaaacaggaagtcagtgaagaaacctagaaaatgt
ttattattaaagctaagtgggagaggctgttctattaaagtacccaaatg
ggggtgggggtgggg
gaattctttaaaattcccagaattccatagagacgattctgtgaaaaacc
aatgaagagcgtgattagaatttttgggtagcaggtttctctctgtctgt
ctctgtctctttgtctgtctgtctgtctctgcgtgagtgtttgtctcttg
tgggcatgtttctctttgtctgtctgtctctgtatatgtgtctgtctgtc
tctgctcaagtgtttgtctctttgtgtgcatatgtctgtctctgtgtgta
tgtgtctgtctttctgtgtatatgtgtctgcctgtctctgtgtgtgtctg
cctttctctgtctgtctctctctgtgtgggtgccgtggtacacagagagg
ttagaggacagcctccgggagttgctttctccttccactgtgtgtcctgg
gcatcagattcaggttgtaagacttggtagcaagcattgctacccatttg
agtctcactggcccagatatcaagtttttaaaggggctttattggttcac
cactaaccacacagaaggccagaggttttcctggaggagttaataggctg
tctagcctttagcagacatgctgctgctgcgatttctgtcatgtgtgtga
ggtgccttgagagaggaaggcttgccagtaggaggttttgaatcatgacc
catcacacttgataaaggcccttcaaggctaaaggtttagtgcctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_122041806_122041970
seq2: B6Ng01-101I13.b_49_213

seq1  TATTTTTCAAATGGCTAAAATTGTAAGGTTTGTGCTATAGGCATGCTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCAAATGGCTAAAATTGTAAGGTTTGTGCTATAGGCATGCTACC  50

seq1  ACAGTAAACGGTGTACAAACAGGAAGTCAGTGAAGAAACCTAGAAAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAACGGTGTACAAACAGGAAGTCAGTGAAGAAACCTAGAAAATGT  100

seq1  TTATTATTAAAGCTAAGTGGGAGAGGCTGTTCTATTAAAGTACCCAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAAAGCTAAGTGGGAGAGGCTGTTCTATTAAAGTACCCAAATG  150

seq1  GGGGTGGGGGTGGGG  165
      |||||||||||||||
seq2  GGGGTGGGGGTGGGG  165

seq1: chr14_122183822_122184518
seq2: B6Ng01-101I13.g_71_767 (reverse)

seq1  TCCGGCACTAAACCTTTAGCCTTGAAGGGCCTTTATCAAGTGTGATGGGT  50
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCACTAAACCTTTAGCCTTGAAGGGCCTTTATCAAGTGTGATGGGT  50

seq1  CCTGATTCAAAAACCTCCTACTGGCAAGCCTTCCTCTCTCAAGGCACCTC  100
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTC-AAAACCTCCTACTGGCAAGCCTTCCTCTCTCAAGGCACCTC  99

seq1  ACACACATGACAGAAATCGCAGCAGCAGCATGTCTGCT-CAGGCTAGACA  149
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  ACACACATGACAGAAATCGCAGCAGCAGCATGTCTGCTAAAGGCTAGACA  149

seq1  GCCTATTAACTCCTCCAGGAAAACCTCTGGCCTTCTGTGTGGTTAGTGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTAACTCCTCCAGGAAAACCTCTGGCCTTCTGTGTGGTTAGTGGT  199

seq1  GAACCAATAAAGCCCCTTTAAAAACTTGATATCTGGGCCAGTGAGACTCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAATAAAGCCCCTTTAAAAACTTGATATCTGGGCCAGTGAGACTCA  249

seq1  AATGGGTAGCAATGCTTGCTACCAAGTCTTACAACCTGAATCTGATGCCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTAGCAATGCTTGCTACCAAGTCTTACAACCTGAATCTGATGCCC  299

seq1  AGGACACACAGTGGAAGGAGAAAGCAACTCCCGGAGGCTGTCCTCTAACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACACAGTGGAAGGAGAAAGCAACTCCCGGAGGCTGTCCTCTAACC  349

seq1  TCTCTGTGTACCACGGCACCCACACAGAGAGAGACAGACAGAGAAAGGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTACCACGGCACCCACACAGAGAGAGACAGACAGAGAAAGGCA  399

seq1  GACACACACAGAGACAGGCAGACACATATACACAGAAAGACAGACACATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACACAGAGACAGGCAGACACATATACACAGAAAGACAGACACATA  449

seq1  CACACAGAGACAGACATATGCACACAAAGAGACAAACACTTGAGCAGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGACAGACATATGCACACAAAGAGACAAACACTTGAGCAGAGA  499

seq1  CAGACAGACACATATACAGAGACAGACAGACAAAGAGAAACATGCCCACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACACATATACAGAGACAGACAGACAAAGAGAAACATGCCCACA  549

seq1  AGAGACAAACACTCACGCAGAGACAGACAGACAGACAAAGAGACAGAGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAAACACTCACGCAGAGACAGACAGACAGACAAAGAGACAGAGAC  599

seq1  AGACAGAGAGAAACCTGCTACCCAAAAATTCTAATCACGCTCTTCATTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAGAAACCTGCTACCCAAAAATTCTAATCACGCTCTTCATTGG  649

seq1  TTTTTCACAGAATCGTCTCTATGGAATTCTGGGAATTTTAAAGAATTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCACAGAATCGTCTCTATGGAATTCTGGGAATTTTAAAGAATTC  697