BAC Information

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BAC

Clone NameB6Ng01-101N15
Chromosome14 (Build37)
Map Location 80,633,537 - 80,732,889
singlet/doubletdoublet
Overlap genenone
Upstream geneAU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101N15.bB6Ng01-101N15.g
ACCDH910913DH910914
length3241,109
definitionDH910913|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N15, 5' end.DH910914|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,633,537 - 80,633,860)(80,731,780 - 80,732,889)
sequence
acgttgtgctgatcctaaggattgtcttaaccatctctcttgtttgttct
ttcagttcttatgtgttttgagactgccttttgtaaattcaagctcagag
ttttgctttctttcttggacaggctgttttagttctctggtagactggct
tttttaacataatgtctcgatttatatcttcaaatgtttatttgaaaatt
taatttgtagacaatacatagcctgaacattggcatcttagccatttata
ttaaaagttatgatgatgatgatgataatgatgatgctgatgctgttgtt
aatgtgtggtatatcgtgtgtgtg
gaattcaccacaccaaaggcgaggtgtggcttctatctcggtgtttcaga
agaaatcttttaagtcttacaattgcccaatgatagaagtgtctgttttt
catgatggcatctcagaccacacatgaaaatctgtgctaaagagatgatg
gaagatgaggccaaccagatgaggatactaacgacaggagctggccatac
tggaaagaaaagtgtgtgattagagaagtagaggtttgggctgtgtaaag
agtagctgacctctggggagaggagaagggctgtagatgacaacagaaac
acaatcaatcatgcatatcaaataaatcaatgaaattgctataaactaaa
actgagatacaccttcctgtgtagcaactatcatatatatactataacag
tcccagagtctcctcagtatatccctttctttgtctatccctgatctgag
tccttttgctataataaaaccatacttgtaagtataatactattataagt
tctcaaacttgacctacaaatatcatcaaacctgaaagacttcatggacc
caaatttggggttagttggtttgaaaggaggtctgctgtgaggctgcact
caaatgggttaagatagcctggacagtagggatgaccatgccctgaaatt
tgggacttcctatacacacttcaattctacttctctgtgttttgtctact
gtctccggataggacctcatgtcctccctttaccaatgcagcctcagtac
actatttcctgaggtatgtcatttccacactttttctagatgccaacgat
aagaaccttttatttataaccattactgccttctgacaaaagaaattggt
ttatcagctagtacctacaaggagtcttctcccctgtgttctagtctctt
tggtatggaaaggttcctcccacaagccaaccctgtggacatcaacacag
ccacaaacctttgacctacaatctgtcctgcttgtaagatattgctgggg
catgttgaaaagacttgtgggagtggccaacctatgcatgattgaacttg
agctcttgccttgagaaaaagcctatgtttctacacttacctgatggcca
gaacataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80633537_80633860
seq2: B6Ng01-101N15.b_55_378

seq1  ACGTTGTGCTGATCCTAAGGATTGTCTTAACCATCTCTCTTGTTTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGTGCTGATCCTAAGGATTGTCTTAACCATCTCTCTTGTTTGTTCT  50

seq1  TTCAGTTCTTATGTGTTTTGAGACTGCCTTTTGTAAATTCAAGCTCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCTTATGTGTTTTGAGACTGCCTTTTGTAAATTCAAGCTCAGAG  100

seq1  TTTTGCTTTCTTTCTTGGACAGGCTGTTTTAGTTCTCTGGTAGACTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTCTTTCTTGGACAGGCTGTTTTAGTTCTCTGGTAGACTGGCT  150

seq1  TTTTTAACATAATGTCTCGATTTATATCTTCAAATGTTTATTTGAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACATAATGTCTCGATTTATATCTTCAAATGTTTATTTGAAAATT  200

seq1  TAATTTGTAGACAATACATAGCCTGAACATTGGCATCTTAGCCATTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTAGACAATACATAGCCTGAACATTGGCATCTTAGCCATTTATA  250

seq1  TTAAAAGTTATGATGATGATGATGATAATGATGATGCTGATGCTGTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTTATGATGATGATGATGATAATGATGATGCTGATGCTGTTGTT  300

seq1  AATGTGTGGTATATCGTGTGTGTG  324
      ||||||||||||||||||||||||
seq2  AATGTGTGGTATATCGTGTGTGTG  324

seq1: chr14_80731780_80732889
seq2: B6Ng01-101N15.g_70_1178 (reverse)

seq1  TCTATGGTTCCTGGCCATCCAGGT-AGTGTAG-AACATGGGCTTTTTCTC  48
      ||||||  | |||||||| ||||| ||||||| ||||| |||||||||||
seq2  TCTATG--TTCTGGCCAT-CAGGTAAGTGTAGAAACATAGGCTTTTTCTC  47

seq1  ATGGCATGGGCCTCAAGTTCAATCATGCATTGGTTGGCCACTCCCACAAG  98
      | |||| | | ||||||||||||||||||| |||||||||||||||||||
seq2  AAGGCAAGAG-CTCAAGTTCAATCATGCATAGGTTGGCCACTCCCACAAG  96

seq1  TTCTTTTCCACCATTGCCCCAGC-ATATCTTACAGGCAGGACAGATTGTA  147
       ||||||| ||   ||||||||| |||||||||| |||||||||||||||
seq2  -TCTTTTCAAC--ATGCCCCAGCAATATCTTACAAGCAGGACAGATTGTA  143

seq1  GGTCAAAGGTTTTGTGGCTGTGTTGATGTCCACA-GGTTTGCTTGTGG--  194
      ||||||||| |||||||||||||||||||||||| |||| ||||||||  
seq2  GGTCAAAGG-TTTGTGGCTGTGTTGATGTCCACAGGGTTGGCTTGTGGGA  192

seq1  GGGACCTTTCCATACCAAAGAGACTAGAACACAGGGGAGAAGACTCCTTG  244
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTTTCCATACCAAAGAGACTAGAACACAGGGGAGAAGACTCCTTG  242

seq1  TAGGTACTAGCTGATAAACCAATTTCTTTTGTCAG-AGGCAGTAATGGTT  293
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGGTACTAGCTGATAAACCAATTTCTTTTGTCAGAAGGCAGTAATGGTT  292

seq1  ATAAATAAAAGGTTCTTATCGTTGGCATCTAGAAAAAGTGTGGAAATGAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAAAGGTTCTTATCGTTGGCATCTAGAAAAAGTGTGGAAATGAC  342

seq1  ATACCTCAGGAAATAGTGTACTGAGGCTGCATTGGTAAAGGGAGGACATG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCAGGAAATAGTGTACTGAGGCTGCATTGGTAAAGGGAGGACATG  392

seq1  AGGTCCTATCCGGAGACAGTAGACAAAACACAGAGAAGTAGAATTGAAGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTATCCGGAGACAGTAGACAAAACACAGAGAAGTAGAATTGAAGT  442

seq1  GTGTATAGGAAGTCCCAAATTTCAGGGCATGGTCATCCCTACTGTCCAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAGGAAGTCCCAAATTTCAGGGCATGGTCATCCCTACTGTCCAGG  492

seq1  CTATCTTAACCCATTTGAGTGCAGCCTCACAGCAGACCTCCTTTCAAACC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTAACCCATTTGAGTGCAGCCTCACAGCAGACCTCCTTTCAAACC  542

seq1  AACTAACCCCAAATTTGGGTCCATGAAGTCTTTCAGGTTTGATGATATTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACCCCAAATTTGGGTCCATGAAGTCTTTCAGGTTTGATGATATTT  592

seq1  GTAGGTCAAGTTTGAGAACTTATAATAGTATTATACTTACAAGTATGGTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTCAAGTTTGAGAACTTATAATAGTATTATACTTACAAGTATGGTT  642

seq1  TTATTATAGCAAAAGGACTCAGATCAGGGATAGACAAAGAAAGGGATATA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATAGCAAAAGGACTCAGATCAGGGATAGACAAAGAAAGGGATATA  692

seq1  CTGAGGAGACTCTGGGACTGTTATAGTATATATATGATAGTTGCTACACA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGACTCTGGGACTGTTATAGTATATATATGATAGTTGCTACACA  742

seq1  GGAAGGTGTATCTCAGTTTTAGTTTATAGCAATTTCATTGATTTATTTGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTGTATCTCAGTTTTAGTTTATAGCAATTTCATTGATTTATTTGA  792

seq1  TATGCATGATTGATTGTGTTTCTGTTGTCATCTACAGCCCTTCTCCTCTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATGATTGATTGTGTTTCTGTTGTCATCTACAGCCCTTCTCCTCTC  842

seq1  CCCAGAGGTCAGCTACTCTTTACACAGCCCAAACCTCTACTTCTCTAATC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGTCAGCTACTCTTTACACAGCCCAAACCTCTACTTCTCTAATC  892

seq1  ACACACTTTTCTTTCCAGTATGGCCAGCTCCTGTCGTTAGTATCCTCATC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTTTTCTTTCCAGTATGGCCAGCTCCTGTCGTTAGTATCCTCATC  942

seq1  TGGTTGGCCTCATCTTCCATCATCTCTTTAGCACAGATTTTCATGTGTGG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGCCTCATCTTCCATCATCTCTTTAGCACAGATTTTCATGTGTGG  992

seq1  TCTGAGATGCCATCATGAAAAACAGACACTTCTATCATTGGGCAATTGTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGATGCCATCATGAAAAACAGACACTTCTATCATTGGGCAATTGTA  1042

seq1  AGACTTAAAAGATTTCTTCTGAAACACCGAGATAGAAGCCACACCTCGCC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAAAAGATTTCTTCTGAAACACCGAGATAGAAGCCACACCTCGCC  1092

seq1  TTTGGTGTGGTGAATTC  1110
      |||||||||||||||||
seq2  TTTGGTGTGGTGAATTC  1109