BAC Information

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BAC

Clone NameB6Ng01-102B23
Chromosome14 (Build37)
Map Location 28,150,915 - 28,317,020
singlet/doubletdoublet
Overlap geneArhgef3, Ccdc66
Upstream gene4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, LOC100040147
Downstream geneLOC665370, Erc2, LOC100040206
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102B23.bB6Ng01-102B23.g
ACCDH911102DH911103
length1,066298
definitionDH911102|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B23, 5' end.DH911103|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,150,915 - 28,151,996)(28,316,723 - 28,317,020)
sequence
gaattctgaccaggctttttttttttttttcatctttttgtcttgagttt
tggggtcctgtggtaaaggcttgagtgaacctgtctgcttattccttctt
cccttgttagtcatagtctgtagatatatatgtgctgtagcatttcagga
acagttatgctaattttcctcactactaataggatccacaaaataaagta
tatcttattttccctttgtggggatgtaattatgtaaaaacaaggatggg
aggtgagtgcttttggggaatattggtatttttcagggatcaccattgag
ttttattaatataattgtctttaccataatcaaagtacactttacacaac
ttgatggctccgactttgttggtcagctataaatcacttcccaataatga
agataggctagattggaaaaagaaacttaagtgggtttcagggcaagttt
cattagcacaaaaggcgactgaacagaaatatatattttctgccggtagg
tgtcgccagtatttataaatgtctaacagcaacaaccaaaaaccacattc
cctcactgtcttaaaaaaaacaagattatataattgtttataaaatagat
attaagtcctgagaacgtttctttttcaagaaacttttctttttttgtaa
aaagaacgataataaaaggaaacctgtgtgtctgaaggccttcctgagat
gacaggacctgttgaccttcagggcgcttgtgtcgagcacctgtgcctgg
cacaattgtgtgatggcagttcctcctgagcatgttcgagggaagaccgt
gtgtgcagtgtggccgtggctgcagccaggttcttctagcactcagtcac
cagcaacttgatgttcacttaacagaaagctcagcggggaacaggtaacc
atgccatctacctgaggaaaatgatgaatacattctcttaaagcaaataa
taaaatttctcttcaggtttaattcaatgctcttttaaattttatgatag
tttcagtgagcaaaacgatacatgtttacattttttcttaaaatatcatt
taaactttaaaaaaat
agtggcataggaggtgtagttaaggatgttcaatttaaacactgaccctg
ctatactcatgttgtaggtccagaggacagagaggtgacaaacaaaacaa
aactctgttctgtggagtttacactgggatgtggaatgcaataaactaag
gcaataaataaagaaataaataaataacaaaggaggaaggcagggtcaca
gagggagggagcctggcagcagtggggagggataagtagtgccagagagg
gagagcaggagcttaggggaggtgctctgggtgatgggggggtggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28150915_28151996
seq2: B6Ng01-102B23.b_43_1108

seq1  GAATTCTGACCAGGCTTTTTTTTTTTTTTTCATCTTTTTGTCTTGAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACCAGGCTTTTTTTTTTTTTTTCATCTTTTTGTCTTGAGTTT  50

seq1  TGGGGTCCTGTGGTAAAGGCTTGAGTGAACCTGTCTGCTTATTCCTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCCTGTGGTAAAGGCTTGAGTGAACCTGTCTGCTTATTCCTTCTT  100

seq1  CCCTTGTTAGTCATAGTCTGTAGATATATATGTGCTGTAGCATTTCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTTAGTCATAGTCTGTAGATATATATGTGCTGTAGCATTTCAGGA  150

seq1  ACAGTTATGCTAATTTTCCTCACTACTAATAGGATCCACAAAATAAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTATGCTAATTTTCCTCACTACTAATAGGATCCACAAAATAAAGTA  200

seq1  TATCTTATTTTCCCTTTGTGGGGATGTAATTATGTAAAAACAAGGATGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTATTTTCCCTTTGTGGGGATGTAATTATGTAAAAACAAGGATGGG  250

seq1  AGGTGAGTGCTTTTGGGGAATATTGGTATTTTTCAGGGATCACCATTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGTGCTTTTGGGGAATATTGGTATTTTTCAGGGATCACCATTGAG  300

seq1  TTTTATTAATATAATTGTCTTTACCATAATCAAAGTACACTTTACACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAATATAATTGTCTTTACCATAATCAAAGTACACTTTACACAAC  350

seq1  TTGATGGCTCCGACTTTGTTGGTCAGCTATAAATCACTTCCCAATAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGCTCCGACTTTGTTGGTCAGCTATAAATCACTTCCCAATAATGA  400

seq1  AGATAGGCTAGATTGGAAAAAGAAACTTAAGTGGGTTTCAGGGCAAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGCTAGATTGGAAAAAGAAACTTAAGTGGGTTTCAGGGCAAGTTT  450

seq1  CATTAGCACAAAAGGCGACTGAACAGAAATATATATTTTCTGCCGGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCACAAAAGGCGACTGAACAGAAATATATATTTTCTGCCGGTAGG  500

seq1  TGTCGCCAGTATTTATAAATGTCTAACAGCAACAACCAAAAACCACATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCCAGTATTTATAAATGTCTAACAGCAACAACCAAAAACCACATTC  550

seq1  CCTCACTGTCTTAAAAAAAACAAGATTATATAATTGTTTATAAAATAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGTCTTAAAAAAAACAAGATTATATAATTGTTTATAAAATAGAT  600

seq1  ATTAAGTCCTGAGAACGTTTCTTTTTCAAGAAACTTTTCTTTTTTTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTCCTGAGAACGTTTCTTTTTCAAGAAACTTTTCTTTTTTTGTAA  650

seq1  AAAGAACGATAATAAAAGGAAACCTGTGTGTCTGAAGGCCTTCCTGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACGATAATAAAAGGAAACCTGTGTGTCTGAAGGCCTTCCTGAGAT  700

seq1  GACAGGACCTGTTGACCTTCAGGGCGCTTGTGTCGAGCACCTGTGCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGACCTGTTGACCTTCAGGGCGCTTGTGTCGAGCACCTGTGCCTGG  750

seq1  CACAATTGTGTGATGGCAGTTCCTCCTGAGCATGTTCGAGGGAAGACCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTGTGTGATGGCAGTTCCTCCTGAGCATGTTCGAGGGAAGACCGT  800

seq1  GTGTGCAGTGTGGCCGTGGCTGCAGCCAGGTTCTTCTAGCACTCAGTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGTGTGGCCGTGGCTGCAGCCAGGTTCTTCTAGCACTCAGTCAC  850

seq1  CAGCAACTTGATGTTCACTTAACAGAAAGCTCAGCGGGGAACAGGTAACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTTGATGTTCACTTAACAGAAAGCTCAGCGGGGAACAGGTAACC  900

seq1  ATGCCATCTACCTGAGGAAAAATGATGAATACATTCTCTTAAAAGCAAAT  950
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  ATGCCATCTACCTGAGG-AAAATGATGAATACATTCTCTT-AAAGCAAAT  948

seq1  AATAAAATTTCTCTTCAGGGTTTAATTCAAATGCTTCTTTTTAAAATTTT  1000
      ||||||||||||||||| |||||||||| ||||| ||||||  |||||||
seq2  AATAAAATTTCTCTTCA-GGTTTAATTC-AATGC-TCTTTT--AAATTTT  993

seq1  ATTGATAGTTTCCAGTGGAAGCAAAAACGATACATGTTTACATTTTTTCT  1050
      | ||||||||| |||||  ||| |||||||||||||||||||||||||| 
seq2  A-TGATAGTTT-CAGTG--AGC-AAAACGATACATGTTTACATTTTTTC-  1037

seq1  TTAAAATAATCCATTTTAAACTTTAAAAAAAT  1082
      ||||||| |||   ||||||||||||||||||
seq2  TTAAAAT-ATC--ATTTAAACTTTAAAAAAAT  1066

seq1: chr14_28316723_28317020
seq2: B6Ng01-102B23.g_73_370 (reverse)

seq1  ACTCCACCCCCCCATCACCCAGAGCACCTCCCCTAAGCTCCTGCTCTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACCCCCCCATCACCCAGAGCACCTCCCCTAAGCTCCTGCTCTCCC  50

seq1  TCTCTGGCACTACTTATCCCTCCCCACTGCTGCCAGGCTCCCTCCCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCACTACTTATCCCTCCCCACTGCTGCCAGGCTCCCTCCCTCTG  100

seq1  TGACCCTGCCTTCCTCCTTTGTTATTTATTTATTTCTTTATTTATTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTGCCTTCCTCCTTTGTTATTTATTTATTTCTTTATTTATTGCCT  150

seq1  TAGTTTATTGCATTCCACATCCCAGTGTAAACTCCACAGAACAGAGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTATTGCATTCCACATCCCAGTGTAAACTCCACAGAACAGAGTTTT  200

seq1  GTTTTGTTTGTCACCTCTCTGTCCTCTGGACCTACAACATGAGTATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTGTCACCTCTCTGTCCTCTGGACCTACAACATGAGTATAGCA  250

seq1  GGGTCAGTGTTTAAATTGAACATCCTTAACTACACCTCCTATGCCACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGTGTTTAAATTGAACATCCTTAACTACACCTCCTATGCCACT  298