BAC Information

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BAC

Clone NameB6Ng01-102E11
Chromosome14 (Build37)
Map Location 33,761,300 - 33,762,275
singlet/doubletsinglet
Overlap genenone
Upstream geneGalntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658
Downstream geneLrrc18, EG622657, Arhgap22, Mapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102E11.b
ACCDH911215
length963
definitionDH911215|Mus musculus domesticus DNA, BAC clone: B6Ng01-102E11, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtcccgtgtgtgcaggccctgggttctggcctcagttattac
tggtgaaattgtttacaatttataaatacgtattatgttttcttaggtga
aataggtactctggaagaaggcaggagtatcttatgttcacaggttgctt
ttgtttccatgggtctgtggtggtgtggtacctatctccccaaattcaac
acatgtgtttaatgtgccatggatcaaacccaaggacatgccaagtatgt
gctttaccatgaagttctaacccaagtcctatagcacgtttttaaaaatg
tggtctttccaaggaagtaccaaactccccatccctccttggctcttcag
taaatgggttccctgctcatgccagcctggttcagctctcttctgtttct
ctgttgtctcaagttgccttcaaggcctcgctgaatcctcactgcctcct
attgcgatgttgagccaggctgtgcaatcgactcaataaccgttatttgt
gtagctctcatactggcttcctgaaacatggatctcaacctgcatcatgg
acagaccacagaaagacaaatgtccaatgggactctatactcttcctttg
ctttccagcctgccgctctgggtcccctgcactactaaccatactagggt
gcacacttctttattttccttatcctcaaacttttgttcaccatggagaa
tatatatgtgtatatatgatacaaattttctattttaataattttcatgg
gtacaattccatggcaccacgggattcatactgatgtataaacatcatca
gcaccattgctacaaagtttattttcataagtaaacaggatccccctgct
ttccggccccacatattgggaaaatcactattgttctttctgtcatataa
acgtactacttgatgactcatgtcagtgggcctacatatttatatatagt
atgtagttgtctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33761300_33762275
seq2: B6Ng01-102E11.b_43_1005

seq1  GAATTCCTGTCCCGTGTGTGCAAGGCCCTGGGTTCTGGCCTCAGTTATTA  50
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAATTCCTGTCCCGTGTGTGC-AGGCCCTGGGTTCTGGCCTCAGTTATTA  49

seq1  CTGGTGAAATTGTTTACAATTTAGAAATACGTAGTATGTTTTCTTAGGTG  100
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  CTGGTGAAATTGTTTACAATTTATAAATACGTATTATGTTTTCTTAGGTG  99

seq1  AAATAGGTACTCTGGAAGAAGGCAGGAGTAGCTTATGTTCACAGGTTGCT  150
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATAGGTACTCTGGAAGAAGGCAGGAGTATCTTATGTTCACAGGTTGCT  149

seq1  TTTGTTTCCATGGGTCTGTGGTGGTGTGGTACCTATCTCCCCAAATTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCCATGGGTCTGTGGTGGTGTGGTACCTATCTCCCCAAATTCAA  199

seq1  CACATGTGTTTAATGTGCCATGGATCAAACCCAAGGACATGCCAAGTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGTTTAATGTGCCATGGATCAAACCCAAGGACATGCCAAGTATG  249

seq1  TGCTTTACCATGAAGTTCTAACCCAAGTCCTATAGCACGTTTTTAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTACCATGAAGTTCTAACCCAAGTCCTATAGCACGTTTTTAAAAAT  299

seq1  GTGGTCTTTCCAAGGAAGTACCAGACTCCCCATCCCTCCTTGGCTCTTCA  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGGTCTTTCCAAGGAAGTACCAAACTCCCCATCCCTCCTTGGCTCTTCA  349

seq1  GTAAATGGGTTCCCTGCTCATGCCAGCCTGGTTCAGCTCTCTTCTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGGGTTCCCTGCTCATGCCAGCCTGGTTCAGCTCTCTTCTGTTTC  399

seq1  TCTGTTGTCTCAAGTTGCCTTCAAGGCCTCGCTGAATCCTCACTGCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTCTCAAGTTGCCTTCAAGGCCTCGCTGAATCCTCACTGCCTCC  449

seq1  TAGTGTGATGTTGAGCCAGGCTGTGCGATCGTCTCAATAACCGTTATTTG  500
      || || |||||||||||||||||||| |||| ||||||||||||||||||
seq2  TATTGCGATGTTGAGCCAGGCTGTGCAATCGACTCAATAACCGTTATTTG  499

seq1  TGTAGCTCTCAGACTGGCTTCCTGAAACATGGATCTCAGCCTGCAGCATG  550
      ||||||||||| |||||||||||||||||||||||||| |||||| ||||
seq2  TGTAGCTCTCATACTGGCTTCCTGAAACATGGATCTCAACCTGCATCATG  549

seq1  GACAGACCACAGAAAGACAAATGTCCAATGGGACTCTATACTCTTCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACCACAGAAAGACAAATGTCCAATGGGACTCTATACTCTTCCTTT  599

seq1  GCTTTCCAGCCTGCCGCTCTGGGTCCCCTGCAGTACTAACCATACTAGGG  650
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCTTTCCAGCCTGCCGCTCTGGGTCCCCTGCACTACTAACCATACTAGGG  649

seq1  TGCACACTTCTTTATTTTCCTTATCCTCAAACTTTTGTTCACCATGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGCACACTTCTTTATTTTCCTTATCCTCAAACTTTTGTTCACCATGGAGA  699

seq1  ATATATATGTGTATATATGATACAAATTTTTCTATTTTAATAATTTTCAT  750
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATATATATGTGTATATATGATACAAA-TTTTCTATTTTAATAATTTTCAT  748

seq1  GGGTACAATTCCATGGCACCAGGGGTATTCATACTGATGTAGAAACATCA  800
      ||||||||||||||||||||| ||| ||||||||||||||| ||||||||
seq2  GGGTACAATTCCATGGCACCACGGG-ATTCATACTGATGTATAAACATCA  797

seq1  TCAGCACCATTGCTAGCAAGGTTTTATTTTCCCAAAGTAAAACAGTAATC  850
      |||||||||||||||  |||  |||||||| |  |||| ||||||  |||
seq2  TCAGCACCATTGCTACAAAG--TTTATTTT-CATAAGT-AAACAG-GATC  842

seq1  CCCCTGCTTTCCGGCCCCACAGATTGGGAAAATCACTATTGTTCTTTCTG  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCCTGCTTTCCGGCCCCACATATTGGGAAAATCACTATTGTTCTTTCTG  892

seq1  TCTTTATAAACGTGACTACTTGAATGACTCATTTAAGTGGGCTTACATAG  950
      ||  ||||||||| |||||||| ||||||||| | ||||||| |||||| 
seq2  TC-ATATAAACGT-ACTACTTG-ATGACTCATGTCAGTGGGCCTACATA-  938

seq1  TTTATTATATAGTAGGTTGTTGTCTT  976
      |||| ||||||||| || ||||||||
seq2  TTTA-TATATAGTATGTAGTTGTCTT  963