BAC Information

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BAC

Clone NameB6Ng01-102J19
Chromosome14 (Build37)
Map Location 98,374,487 - 98,526,119
singlet/doubletdoublet
Overlap geneDach1
Upstream geneEG668659
Downstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102J19.bB6Ng01-102J19.g
ACCDH911450DH911451
length1,1351,032
definitionDH911450|Mus musculus domesticus DNA, BAC clone: B6Ng01-102J19, 5' end.DH911451|Mus musculus domesticus DNA, BAC clone: B6Ng01-102J19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,374,487 - 98,375,642)(98,525,085 - 98,526,119)
sequence
gaattccatataaagtgcatttttcaaatcctaatggttgaaaagttata
ttacattgaagagatggtaagtatttaaatattccatagaacgcactctt
tattagtctacattgcttactaaaacccagaagaaacaagtttaaacatg
caagaaattatggtcaagcatagttattattaatattctggaattgatag
gttatttatgtctggcattctttccccctgattattcagggagacaggcg
gcttataaatatctcatcacaccaccgtcacagaaatttcctcgacagtg
ctcatgcacagctattagcaatatgaatctaaccattacaaggaggagga
aaatcgaacatgtggcattaatacgcagtcctggttcctaaccatctgat
aggcagatggtgtgaagcagcttctccagctgaaatgaaggggcacatca
tttaaaggcttgtttgcattctaactgatatcactgccatattgatacac
gcgatgcatcatggcagggtttgaacaatctagtttgcttcagtcataaa
tgtttacagccttggtttttttttctaatcttataaacatgtttagaaga
gtgcatttttaatttatgaaagctattgtttacttctgttgaactagaag
attagtagaaagctgaaatattaaattacttcaaccagagcaatatatcc
aagacagatgaataaagcaggtttctattttcaataaggatgttagtaaa
ggaattttaaaattagcccaggcattttgtgcattaaatacatttattca
tttaaaccttccagctattttttccccaagtggcatagagaggaatttaa
tgctttacatagtcattcatttaaaactctcactgtgtgcaattaatctt
gtctaacaattcaattcagaaagtaaacatcaaaaagcatagtcaattca
acactcattactgtgagcatctttctgctctgacagttctatagacttga
atgctacgttgaagtgcattgtgagctcattgagtctgatacaactcaat
gaaatcctccaagacacagaacctgctcagtacagcactggaaacaccag
tatcttttttccttatcctacttttttctttctta
gaattctcctcccttatggctctcttggatttaccttagtcttattctgt
atagatcagtgaagtaaaaatgagctgtttctgttccactctagctatct
tcacttataactcttgtctttagtactgttgattcaattatgttacattt
agcataccaatatctgaaatgatcttttgtttgtcagttttgtcttctcc
ttagtatggtattctttaaaacaaggaactgtgctgtttccactactgga
tactcactactgagggcagaacttgacattttgtaaggggttagttaatg
tttgttaaatgagttatgtaacagaacatttatactatccagtttgctcc
tctcctatgaagaatgaagaatgatgtttgtacactgtaatgatatttct
gcatgtagaagaataaatgggtacagaaaggtgaatggctcatctccttt
cttatagctagcaaaatatgtcataatagttgtaaacttgagaaataatt
ggaggttcccagtttcaaaccaggattaaataaattaaagggggctaggg
tcctgtggtacttgctaagttccatgcggggcattttccatgtacatcag
atgaacagatgaactctgcatccttatcagttattgctcctaagggagta
gaatttaaactgctttatttgcctcccatcccccctctctgtatgtgtgt
gtgggtgtgtgcgtgtggtgatggttagtgcaagctgcagatcatgagaa
aaagcaatgtagaatgtttccctaagtttaatttttcttctttcttcttg
ctgccttaatgaggagaagcttcattttgcccccaaaccgcacagttttt
acaaggaaatctgcttgtgtaaatcttttctctgttctttcaagctctgg
gaactgtcctatctctgtgctctggtggtctccagacctgaacacacttg
ggtgcaccatactggttttctcacctttgatggcattttcaaactggtct
ctgtattcacccagctcctccagatgtcagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98374487_98375642
seq2: B6Ng01-102J19.b_50_1184

seq1  GAATTCCATATAAAGTGCATTTTTCAAATCCTAATGGTTGAAAAGTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATAAAGTGCATTTTTCAAATCCTAATGGTTGAAAAGTTATA  50

seq1  TTACATTGAAGAGATGGTAAGTATTTAAATATTCCATAGAACGCACTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTGAAGAGATGGTAAGTATTTAAATATTCCATAGAACGCACTCTT  100

seq1  TATTAGTCTACATTGCTTACTAAAACCCAGAAGAAACAAGTTTAAACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTCTACATTGCTTACTAAAACCCAGAAGAAACAAGTTTAAACATG  150

seq1  CAAGAAATTATGGTCAAGCATAGTTATTATTAATATTCTGGAATTGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAATTATGGTCAAGCATAGTTATTATTAATATTCTGGAATTGATAG  200

seq1  GTTATTTATGTCTGGCATTCTTTCCCCCTGATTATTCAGGGAGACAGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTATGTCTGGCATTCTTTCCCCCTGATTATTCAGGGAGACAGGCG  250

seq1  GCTTATAAATATCTCATCACACCACCGTCACAGAAATTTCCTCGACAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAAATATCTCATCACACCACCGTCACAGAAATTTCCTCGACAGTG  300

seq1  CTCATGCACAGCTATTAGCAATATGAATCTAACCATTACAAGGAGGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCACAGCTATTAGCAATATGAATCTAACCATTACAAGGAGGAGGA  350

seq1  AAATCGAACATGTGGCATTAATACGCAGTCCTGGTTCCTAACCATCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGAACATGTGGCATTAATACGCAGTCCTGGTTCCTAACCATCTGAT  400

seq1  AGGCAGATGGTGTGAAGCAGCTTCTCCAGCTGAAATGAAGGGGCACATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGATGGTGTGAAGCAGCTTCTCCAGCTGAAATGAAGGGGCACATCA  450

seq1  TTTAAAGGCTTGTTTGCATTCTAACTGATATCACTGCCATATTGATACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGCTTGTTTGCATTCTAACTGATATCACTGCCATATTGATACAC  500

seq1  GCGATGCATCATGGCAGGGTTTGAACAATCTAGTTTGCTTCAGTCATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATGCATCATGGCAGGGTTTGAACAATCTAGTTTGCTTCAGTCATAAA  550

seq1  TGTTTACAGCCTTGGTTTTTTTTTCTAATCTTATAAACATGTTTAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGCCTTGGTTTTTTTTTCTAATCTTATAAACATGTTTAGAAGA  600

seq1  GTGCATTTTTAATTTATGAAAGCTATTGTTTACTTCTGTTGAACTAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTTTTAATTTATGAAAGCTATTGTTTACTTCTGTTGAACTAGAAG  650

seq1  ATTAGTAGAAAGCTGAAATATTAAATTACTTCAACCAGAGCAATATATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAGAAAGCTGAAATATTAAATTACTTCAACCAGAGCAATATATCC  700

seq1  AAGACAGATGAATAAAGCAGGTTTCTATTTTCAATAAGGATGTTAGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGATGAATAAAGCAGGTTTCTATTTTCAATAAGGATGTTAGTAAA  750

seq1  GGAATTTTAAAATTAGCCCAGGCATTTTGTGCATTAAATACATTTATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTAAAATTAGCCCAGGCATTTTGTGCATTAAATACATTTATTCA  800

seq1  TTTAAACCTTCCAGCTATTTTTTCCCCAAGTGGCATAGAGAGGAATTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACCTTCCAGCTATTTTTTCCCCAAGTGGCATAGAGAGGAATTTAA  850

seq1  TGCTTTACATAGTCATTCATTTAAAACTCTCACTGTGTGCAATTAATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTACATAGTCATTCATTTAAAACTCTCACTGTGTGCAATTAATCTT  900

seq1  GTCTAACAATTCAATTCAGAAAGTAAAACATCAAAAAGCATAGTTCAATT  950
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  GTCTAACAATTCAATTCAGAAAGT-AAACATCAAAAAGCATAG-TCAATT  948

seq1  CAACACTCATTACTGTGAGGCAATCTTTCTGCTCCTGACAGTTCCTATAG  1000
      |||||||||||||||||||   ||||||||||| ||||||||| ||||||
seq2  CAACACTCATTACTGTGAG--CATCTTTCTGCT-CTGACAGTT-CTATAG  994

seq1  ACTTTGAAATGCTACGTTGAAGGTGCATTGTGAGCTCCATATGAGTCTGA  1050
      ||||   |||||||||||||| |||||||||||||| ||| |||||||||
seq2  ACTT--GAATGCTACGTTGAA-GTGCATTGTGAGCT-CAT-TGAGTCTGA  1039

seq1  ATTACAACTCAATTGAAATCACTCCAAGACACAGAACCCTTGGCTCAGTA  1100
        |||||||||| ||||||| |||||||||||||||||    ||||||||
seq2  --TACAACTCAA-TGAAATC-CTCCAAGACACAGAACC---TGCTCAGTA  1082

seq1  CAGCAACTTGAAAACACCAGTATCTTTTTTTTCCCTTACTCTACTTTTT-  1149
      |||||   || |||||||||||||||||||   |||||  ||||||||| 
seq2  CAGCA--CTGGAAACACCAGTATCTTTTTT---CCTTATCCTACTTTTTT  1127

seq1  -TTTCTTA  1156
       |||||||
seq2  CTTTCTTA  1135

seq1: chr14_98525085_98526119
seq2: B6Ng01-102J19.g_70_1101 (reverse)

seq1  TGCTGACATCTGGAGGAGCTGGGTG-ATACAGAGACCAGTTTTGAAAATG  49
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  TGCTGACATCTGGAGGAGCTGGGTGAATACAGAGACCAG-TTTGAAAATG  49

seq1  CCATCAAAGGTGAGGAAAACCAGTATGGTGGCACCCAAGGTGTG-TCAGG  98
      ||||||||||||| ||||||||||||||| |||||||| ||||| |||||
seq2  CCATCAAAGGTGA-GAAAACCAGTATGGT-GCACCCAA-GTGTGTTCAGG  96

seq1  TCTGGAAGACCACCAGAGCACAGAGGTAGGACAGTTCCCAGAGCCTGAAA  148
      ||||| ||||||||||||||||||| |||||||||||||||||| |||||
seq2  TCTGG-AGACCACCAGAGCACAGAGATAGGACAGTTCCCAGAGCTTGAAA  145

seq1  GAACAGAGAAAAGATTTACACAAGCAGATTTCCTTGTAAAAACTGTGCGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAGAAAAGATTTACACAAGCAGATTTCCTTGTAAAAACTGTGCGG  195

seq1  TTTGGGGGCAAAATGAAGCTTCTCCTCATTAAGGCAGCAAGAAGAAAGAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGCAAAATGAAGCTTCTCCTCATTAAGGCAGCAAGAAGAAAGAA  245

seq1  GAAAAATTAAACTTAGGGAAACATTCTACATTGCTTTTTCTCCTGATCTG  298
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAAAAATTAAACTTAGGGAAACATTCTACATTGCTTTTTCTCATGATCTG  295

seq1  CAGCTTGCACTAACCATCACCACACGCACACACCCACACACACATACAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGCACTAACCATCACCACACGCACACACCCACACACACATACAGA  345

seq1  GAGGGGGGATGGGAGGCAAATAAAGCAGTTTAAATTCTACTCCCTTAGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGGATGGGAGGCAAATAAAGCAGTTTAAATTCTACTCCCTTAGGA  395

seq1  GCAATAACTGATAAGGATGCAGAGTTCATCTGTTCATCTGATGTACATGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAACTGATAAGGATGCAGAGTTCATCTGTTCATCTGATGTACATGG  445

seq1  AAAATGCCCCGCATGGAACTTAGCAAGTACCACAGGACCCTAGCCCCCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCCCCGCATGGAACTTAGCAAGTACCACAGGACCCTAGCCCCCTT  495

seq1  TAATTTATTTAATCCTGGTTTGAAACTGGGAACCTCCAATTATTTCTCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATTTAATCCTGGTTTGAAACTGGGAACCTCCAATTATTTCTCAA  545

seq1  GTTTACAACTATTATGACATATTTTGCTAGCTATAAGAAAGGAGATGAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAACTATTATGACATATTTTGCTAGCTATAAGAAAGGAGATGAGC  595

seq1  CATTCACCTTTCTGTACCCATTTATTCTTCTACATGCAGAAATATCATTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACCTTTCTGTACCCATTTATTCTTCTACATGCAGAAATATCATTA  645

seq1  CAGTGTACAAACATCATTCTTCATTCTTCATAGGAGAGGAGCAAACTGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACAAACATCATTCTTCATTCTTCATAGGAGAGGAGCAAACTGGA  695

seq1  TAGTATAAATGTTCTGTTACATAACTCATTTAACAAACATTAACTAACCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATAAATGTTCTGTTACATAACTCATTTAACAAACATTAACTAACCC  745

seq1  CTTACAAAATGTCAAGTTCTGCCCTCAGTAGTGAGTATCCAGTAGTGGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAAATGTCAAGTTCTGCCCTCAGTAGTGAGTATCCAGTAGTGGAA  795

seq1  ACAGCACAGTTCCTTGTTTTAAAGAATACCATACTAAGGAGAAGACAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACAGTTCCTTGTTTTAAAGAATACCATACTAAGGAGAAGACAAAA  845

seq1  CTGACAAACAAAAGATCATTTCAGATATTGGTATGCTAAATGTAACATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAACAAAAGATCATTTCAGATATTGGTATGCTAAATGTAACATAA  895

seq1  TTGAATCAACAGTACTAAAGACAAGAGTTATAAGTGAAGATAGCTAGAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCAACAGTACTAAAGACAAGAGTTATAAGTGAAGATAGCTAGAGT  945

seq1  GGAACAGAAACAGCTCATTTTTACTTCACTGATCTATACAGAATAAGACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGAAACAGCTCATTTTTACTTCACTGATCTATACAGAATAAGACT  995

seq1  AAGGTAAATCCAAGAGAGCCATAAGGGAGGAGAATTC  1035
      |||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAATCCAAGAGAGCCATAAGGGAGGAGAATTC  1032