BAC Information

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BAC

Clone NameB6Ng01-103A06
Chromosome14 (Build37)
Map Location 38,129,228 - 38,130,108
singlet/doubletsinglet
Overlap genenone
Upstream geneGcap14, LOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm
Downstream geneLOC382871, LOC382872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103A06.bB6Ng01-103A06.g
ACCDH911739DH911740
length8851,104
definitionDH911739|Mus musculus domesticus DNA, BAC clone: B6Ng01-103A06, 5' end.DH911740|Mus musculus domesticus DNA, BAC clone: B6Ng01-103A06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaccacaggtgtgaaaagtgtttctgttcaggaaatattcccc
tgtgcccatgtgcttgaggctcttcccactttcttttctattagtttctg
gttctatgtggaggtccttgatccacttggacttgagttttgtgcaaagg
ctgtctcctgagaggcaatgccagtgcctgacaatacagaagtggatgct
cacagccactcattggactgagcacagggtccccaatggaagagctagag
aaaggacccaaggagcagaaggggtttgcagccccataggaggaacaaca
atatgaaccaaccagtacccccagagctcccagctactaaaccaccaacc
aaagagtacacaaggagggactcaaggcttcagccacatatgtagaagag
gatggccttgtcagacataaatgagaggagaagctcttggacttgtgaag
gctcgatgccccagtgtaagggaatgctaggacagggaagcaggagtggg
tacgttagtgaacagtggggaagggaatgggggtttttcagaggggaaat
gagggaaggggataaaatttgaaatgtaaataaagaaaatatataataaa
aaataaaaattttaaaaaagaaaaaaagtggttttgctcagcccccttct
gacatggaagacacagctgcagggcttctgtgggtgaaccagagtttcat
gcttccccggacaaatctaggacttgggaacttgctttaactctttttcc
aatgaaaatgccactcacccctgccaaataaatttggggaacaaaatgag
gactccaccccaccacctgatacacatggcagaatctaatttcatgcagc
aatacggtttcgggtgttttgtttgtttatttgtt
gaattctttgtttagctctgagccccattttttaacggggttatctgatt
ttctggagtccaccttcttgagttctttatatatattagatattagtccc
ctatctgatttaggttaggtaaagatcctttcccagtctgttggtggcct
ttttgtcttattgacagtgtcctttgccttacagaagctttgcaatttta
tgaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctattcagtaatttttcccctgtgcccatatcttcgaggctttcccccac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttga
tccacttatatttgaccttagtacaaagagataggaatggatcaatttgc
attcttctacatgttaaccaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccatgggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctgttccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattac
tctgtagtacagctttaggtcaggcacggtgattccaccagaggttcttt
tatccttgagaagagttttcgctatcctaggttttttgttattccagttg
aatttgcagactgctctttctaattcgttgaagaattgagttggaatttt
gatggggattggattgaatgtgtagattgcttttggcaagatagccattt
ttactatattgaacctgccaatccatgatcatgggagagctttccatctt
ctgagatcttctttaatttatttcttcagagacttgaagttctttcatac
agatctttcacttccttagtagagtcacgccaaggtatttttatattatt
tgtgactattgagaggggttgattccctaatttctttctcaacctgttta
ttcttgtgtaaagaacggccattgagttgttgagtaatttatatccagtc
cttcaagaagcctttataagggtagagatgctctgatgaaattagggctc
tatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_38129228_38130108
seq2: B6Ng01-103A06.b_46_930 (reverse)

seq1  AACAAACAAACAAAC-AAACACCCGAAA-CGTATTGCTGCATGAAATTAG  48
      |||||| |||||||| |||||||||||| |||||||||||||||||||||
seq2  AACAAATAAACAAACAAAACACCCGAAACCGTATTGCTGCATGAAATTAG  50

seq1  ATTCTGCCATGTGTATCAGGTGGTGGGGTGGAGTCCTCATTTTTGTTCCC  98
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTCTGCCATGTGTATCAGGTGGTGGGGTGGAGTCCTCA-TTTTGTTCCC  99

seq1  CAAATTTATTTGGCAGGGGTGAGTGGCATTTTCATTGG-AAAAGAGTT-A  146
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  CAAATTTATTTGGCAGGGGTGAGTGGCATTTTCATTGGAAAAAGAGTTAA  149

seq1  AGCAAGTTCCCAAGTCCTAGATTTGTCCGGGGAAGCATG-AACTCTGGTT  195
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGCAAGTTCCCAAGTCCTAGATTTGTCCGGGGAAGCATGAAACTCTGGTT  199

seq1  CACCCACAGAAGCCCTGCAGCTGTGTCTTCCATGTCAGAAGGGGGCTGAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACAGAAGCCCTGCAGCTGTGTCTTCCATGTCAGAAGGGGGCTGAG  249

seq1  CAAAACCACTTTTTTTCTTTTTTAAAATTTTTATTTTTTATTATATATTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCACTTTTTTTCTTTTTTAAAATTTTTATTTTTTATTATATATTT  299

seq1  TCTTTATTTACATTTCAAATTTTATCCCCTTCCCTCATTTCCCCTCTGAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTACATTTCAAATTTTATCCCCTTCCCTCATTTCCCCTCTGAA  349

seq1  AAACCCCCATTCCCTTCCCCACTGTTCACTAACGTACCCACTCCTGCTTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCCATTCCCTTCCCCACTGTTCACTAACGTACCCACTCCTGCTTC  399

seq1  CCTGTCCTAGCATTCCCTTACACTGGGGCATCGAGCCTTCACAAGTCCAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTAGCATTCCCTTACACTGGGGCATCGAGCCTTCACAAGTCCAA  449

seq1  GAGCTTCTCCTCTCATTTATGTCTGACAAGGCCATCCTCTTCTACATATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTCTCCTCTCATTTATGTCTGACAAGGCCATCCTCTTCTACATATG  499

seq1  TGGCTGAAGCCTTGAGTCCCTCCTTGTGTACTCTTTGGTTGGTGGTTTAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAAGCCTTGAGTCCCTCCTTGTGTACTCTTTGGTTGGTGGTTTAG  549

seq1  TAGCTGGGAGCTCTGGGGGTACTGGTTGGTTCATATTGTTGTTCCTCCTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGGAGCTCTGGGGGTACTGGTTGGTTCATATTGTTGTTCCTCCTA  599

seq1  TGGGGCTGCAAACCCCTTCTGCTCCTTGGGTCCTTTCTCTAGCTCTTCCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTGCAAACCCCTTCTGCTCCTTGGGTCCTTTCTCTAGCTCTTCCA  649

seq1  TTGGGGACCCTGTGCTCAGTCCAATGAGTGGCTGTGAGCATCCACTTCTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGACCCTGTGCTCAGTCCAATGAGTGGCTGTGAGCATCCACTTCTG  699

seq1  TATTGTCAGGCACTGGCATTGCCTCTCAGGAGACAGCCTTTGCACAAAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCAGGCACTGGCATTGCCTCTCAGGAGACAGCCTTTGCACAAAAC  749

seq1  TCAAGTCCAAGTGGATCAAGGACCTCCACATAGAACCAGAAACTAATAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCCAAGTGGATCAAGGACCTCCACATAGAACCAGAAACTAATAGA  799

seq1  AAAGAAAGTGGGAAGAGCCTCAAGCACATGGGCACAGGGGAATATTTCCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGTGGGAAGAGCCTCAAGCACATGGGCACAGGGGAATATTTCCT  849

seq1  GAACAGAAACACTTTTCACACCTGTGGTAAGAATTC  881
      ||||||||||||||||||||||||||||||||||||
seq2  GAACAGAAACACTTTTCACACCTGTGGTAAGAATTC  885