BAC Information

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BAC

Clone NameB6Ng01-103A16
Chromosome14 (Build37)
Map Location 97,278,303 - 97,394,866
singlet/doubletdoublet
Overlap geneLOC668654
Upstream gene4921530L21Rik, Klhl1, LOC100043366
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103A16.bB6Ng01-103A16.g
ACCDH911755DH911756
length1,1821,127
definitionDH911755|Mus musculus domesticus DNA, BAC clone: B6Ng01-103A16, 5' end.DH911756|Mus musculus domesticus DNA, BAC clone: B6Ng01-103A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,393,681 - 97,394,866)(97,278,303 - 97,279,434)
sequence
gaattcactaatgggtgggataataatactgtttgctatttgcttttgtt
taacttgtcaatgcaacatctattgtgagtgaatgcttagaagtaatttt
gccttttaagtatcataaacattaacaaatgctatttgattcacttacca
atgataggagtagagccatgaaattttcttaaccttttctctagctcaat
aaatcaccagcagacaagaactttaagcccgacttcagtaggaaatcagc
agacagatgtagtgcacattcccaacaaaataattcagaacctgtttcaa
tttatcaaatgcctgctttatctgtcaaagccatgtcccttcttaaataa
agggcattgtttctgcagcgagggaaagggtctgatgcattgttatctgc
aaatggatggcggaataatggaacaacaagcagggtttcaaactaagaga
tcaaaggccagaatgcattacaaatcttgttaaaataaatgagactaaga
gcacaattccaatgaagaccttcatagtctgaaacagtctccccctgttt
tcagaagagatctttaaaatgaatcttaatcccaccataaacaccaaatg
gctttagagcttctgtccaaaaagtgcaatatgcaaagggggtagatttg
aagaattctcatgcaacttggatataaggacctgcgtgtgctcacatggt
agcatttttctgacattgttgatcttcctatatgctgcattttttcatat
aagaaaaactttgttcatattacatctgaatggaattcatatatatttga
ttaggaacatacaactgaaatgaatatgcttattttggttatgttagtca
ttcgtaagtaatcccttttgatttcagtgatttccttatcttattatggc
aaatgggacacattgtgttaaccctctcaagcataagaaaagaatgaaaa
tatatgaattctaaacatttaattattttactcatacacagtaatctttc
aatcccaggcactctcagctcaatgcgtgtttaaacctatcattgcagtg
atgatgatgagatgatgactgctgcacacatcttactctggatcttgacc
tggtgacagtacagctgatgtattcgttcctctgcatgattggacttgtc
ttcaatttccttatctggcagtttgcctagat
gaattccacagctccactactaagaatgactagtatcagcacacaagtaa
ccaagtactgctgggatgaggagaaggaaaagcacactggttatagggat
ctggagacctcctgtcttagtcagggtttctattcctgcacaaacatcat
gaccaagaagcaggttggagagaaaagggtttattcaccttacacttccc
tactgctgttcatcaccaaggaagtcaggactggaactcaagcaggtcag
gaagcaggtgctgatacagaggccatggagggatattcttactggcttgc
ttcccctggcttgctcagcctgctctcttgtagaaccaagactaccagcc
cagagatggcatcacccactaggggcctttcccccttggtcactaattga
gaaaatgccttacagttggatctcatggaggcatttgctcaacggaagct
cctttctctgtgataactccagctgtgtctagttgacatagactagccag
tacacctcctatgtaatgaagtcaaaagggaggatgatcagagctggaat
ggaaataacacagatgcctcatctgtcactatgaaaagacattgcttgtt
tttgtgcttgagttggtttcattctgtgttgttaatattgttagctttgt
gatcgggctgtctcactcataaaagaacttaagtgacaatagaactgaca
gttgcaatctcatttttcttttgagttcctatctgtcttataaactaggt
gcgagagctagctaaattaacctgaaaacattagaatctgtttctagtct
tgggaaccagagcagcattgtgcaatagcttgttcatttctcaaatggtt
gcagaaagtgtgagtcactaaaccatgtaatggttttaatgatgaattct
gatcatgctttcaaagcctgacactacacctctctaatgatgtgtactgt
ccctttttgtacagtgtttcagacataccatgatattttaaagcacattt
gaccccgaaaaagccagtcatttatttgacagaaaaatctccatcccttc
ttatgtaaatcatattctgcatcagctagtccttggcattccatttagag
tgaaagttaagtctagtctggtctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97393681_97394866
seq2: B6Ng01-103A16.b_45_1226 (reverse)

seq1  ATCTAAGCAAACTGCCAGATTAGGGAAATGGAGACAAGGTTCAATCATGC  50
      ||||| |||||||||||||| ||| || || |||||| || |||||||||
seq2  ATCTAGGCAAACTGCCAGATAAGGAAATTGAAGACAA-GTCCAATCATGC  49

seq1  AGAGG-ACGAATACATCAGGCTGTACTGTCA-CAGGTC-AGATCCAGAGT  97
      ||||| |||||||||||| |||||||||||| |||||| |||||||||||
seq2  AGAGGAACGAATACATCA-GCTGTACTGTCACCAGGTCAAGATCCAGAGT  98

seq1  AAGATGTGTGCAGCAGTCATCATCTCATCATCATCACCTGCAATGATTAG  147
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  AAGATGTGTGCAGCAGTCATCATCTCATCATCATCA-CTGCAATGA-TAG  146

seq1  GTTTAAACACGCATTTGAGCCTGAGAGTGCCTGGGATTGAAAGATTACTG  197
      ||||||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  GTTTAAACACGCA-TTGAG-CTGAGAGTGCCTGGGATTGAAAGATTACTG  194

seq1  TGTATGAGTAAAATAATTAAATGTTTAGAATTCATATATTTTTCATTCTT  247
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTATGAGTAAAATAATTAAATGTTTAGAATTCATATA-TTTTCATTCTT  243

seq1  TTCTTATACTTGAGAGGGTTAACACAATGTGTCCCATTTGCCATAATAAG  297
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGCTTGAGAGGGTTAACACAATGTGTCCCATTTGCCATAATAAG  293

seq1  ATAAGGAAATCACTGAAATCAAAAGGGATTACTTACGAATGACTAACATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAAATCACTGAAATCAAAAGGGATTACTTACGAATGACTAACATA  343

seq1  ACCAAAATAAGCATATTCATTTCAGTTGTATGTTCCTAATCAAATATATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAATAAGCATATTCATTTCAGTTGTATGTTCCTAATCAAATATATA  393

seq1  TGAATTCCATTCAGATGTAATATGAACAAAGTTTTTCTTATATGAAAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCCATTCAGATGTAATATGAACAAAGTTTTTCTTATATGAAAAAA  443

seq1  TGCAGCATATAGGAAGATCAACAATGTCAGAAAAATGCTACCATGTGAGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCATATAGGAAGATCAACAATGTCAGAAAAATGCTACCATGTGAGC  493

seq1  ACACGCAGGTCCTTATATCCAAGTTGCATGAGAATTCTTCAAATCTACCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCAGGTCCTTATATCCAAGTTGCATGAGAATTCTTCAAATCTACCC  543

seq1  CCTTTGCATATTGCACTTTTTGGACAGAAGCTCTAAAGCCATTTGGTGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCATATTGCACTTTTTGGACAGAAGCTCTAAAGCCATTTGGTGTT  593

seq1  TATGGTGGGATTAAGATTCATTTTAAAGATCTCTTCTGAAAACAGGGGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGGGATTAAGATTCATTTTAAAGATCTCTTCTGAAAACAGGGGGA  643

seq1  GACTGTTTCAGACTATGAAGGTCTTCATTGGAATTGTGCTCTTAGTCTCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTTCAGACTATGAAGGTCTTCATTGGAATTGTGCTCTTAGTCTCA  693

seq1  TTTATTTTAACAAGATTTGTAATGCATTCTGGCCTTTGATCTCTTAGTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAACAAGATTTGTAATGCATTCTGGCCTTTGATCTCTTAGTTT  743

seq1  GAAACCCTGCTTGTTGTTCCATTATTCCGCCATCCATTTGCAGATAACAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGCTTGTTGTTCCATTATTCCGCCATCCATTTGCAGATAACAA  793

seq1  TGCATCAGACCCTTTCCCTCGCTGCAGAAACAATGCCCTTTATTTAAGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAGACCCTTTCCCTCGCTGCAGAAACAATGCCCTTTATTTAAGAA  843

seq1  GGGACATGGCTTTGACAGATAAAGCAGGCATTTGATAAATTGAAACAGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATGGCTTTGACAGATAAAGCAGGCATTTGATAAATTGAAACAGGT  893

seq1  TCTGAATTATTTTGTTGGGAATGTGCACTACATCTGTCTGCTGATTTCCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTATTTTGTTGGGAATGTGCACTACATCTGTCTGCTGATTTCCT  943

seq1  ACTGAAGTCGGGCTTAAAGTTCTTGTCTGCTGGTGATTTATTGAGCTAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGTCGGGCTTAAAGTTCTTGTCTGCTGGTGATTTATTGAGCTAGA  993

seq1  GAAAAGGTTAAGAAAATTTCATGGCTCTACTCCTATCATTGGTAAGTGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTTAAGAAAATTTCATGGCTCTACTCCTATCATTGGTAAGTGAA  1043

seq1  TCAAATAGCATTTGTTAATGTTTATGATACTTAAAAGGCAAAATTACTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAGCATTTGTTAATGTTTATGATACTTAAAAGGCAAAATTACTTC  1093

seq1  TAAGCATTCACTCACAATAGATGTTGCATTGACAAGTTAAACAAAAGCAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTCACTCACAATAGATGTTGCATTGACAAGTTAAACAAAAGCAA  1143

seq1  ATAGCAAACAGTATTATTATCCCACCCATTAGTGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAACAGTATTATTATCCCACCCATTAGTGAATTC  1182

seq1: chr14_97278303_97279434
seq2: B6Ng01-103A16.g_67_1193

seq1  GAATTCCACAGCTCCACTACTAAGAATGACTAGTATCAGCACACAAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGCTCCACTACTAAGAATGACTAGTATCAGCACACAAGTAA  50

seq1  CCAAGTACTGCTGGGATGAGGAGAAGGAAAAGCACACTGGTTATAGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTACTGCTGGGATGAGGAGAAGGAAAAGCACACTGGTTATAGGGAT  100

seq1  CTGGAGACCTCCTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGACCTCCTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCAT  150

seq1  GACCAAGAAGCAGGTTGGAGAGAAAAGGGTTTATTCACCTTACACTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGAAGCAGGTTGGAGAGAAAAGGGTTTATTCACCTTACACTTCCC  200

seq1  TACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAG  250

seq1  GAAGCAGGTGCTGATACAGAGGCCATGGAGGGATATTCTTACTGGCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGTGCTGATACAGAGGCCATGGAGGGATATTCTTACTGGCTTGC  300

seq1  TTCCCCTGGCTTGCTCAGCCTGCTCTCTTGTAGAACCAAGACTACCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGGCTTGCTCAGCCTGCTCTCTTGTAGAACCAAGACTACCAGCC  350

seq1  CAGAGATGGCATCACCCACTAGGGGCCTTTCCCCCTTGGTCACTAATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGGCATCACCCACTAGGGGCCTTTCCCCCTTGGTCACTAATTGA  400

seq1  GAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTGCTCAACGGAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTGCTCAACGGAAGCT  450

seq1  CCTTTCTCTGTGATAACTCCAGCTGTGTCTAGTTGACATAGACTAGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCTGTGATAACTCCAGCTGTGTCTAGTTGACATAGACTAGCCAG  500

seq1  TACACCTCCTATGTAATGAAGTCAAAAGGGAGGATGATCAGAGCTGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTCCTATGTAATGAAGTCAAAAGGGAGGATGATCAGAGCTGGAAT  550

seq1  GGAAATAACACAGATGCCTCATCTGTCACTATGAAAAGACATTGCTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAACACAGATGCCTCATCTGTCACTATGAAAAGACATTGCTTGTT  600

seq1  TTTGTGCTTGAGTTGGTTTCATTCTGTGTTGTTAATATTGTTAGCTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTGAGTTGGTTTCATTCTGTGTTGTTAATATTGTTAGCTTTGT  650

seq1  GATCGGGCTGTCTCACTCATAAAAGAACTTAAGTGACAATAGAACTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGGCTGTCTCACTCATAAAAGAACTTAAGTGACAATAGAACTGACA  700

seq1  GTTGCAATCTCATTTTTCTTTTGAGTTCCTATCTGTCTTATAAACTAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAATCTCATTTTTCTTTTGAGTTCCTATCTGTCTTATAAACTAGGT  750

seq1  GCGAGAGCTAGCTAAATTAACCTGAAAACATTAGAATCTGTTTCTAGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGAGCTAGCTAAATTAACCTGAAAACATTAGAATCTGTTTCTAGTCT  800

seq1  TGGGAACCAGAGCAGCATTGTGCAATAGCTTGTTCATTTCTCAAATGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACCAGAGCAGCATTGTGCAATAGCTTGTTCATTTCTCAAATGGTT  850

seq1  GCAGAAAGTGTGAGTCACTAAACCATGTAATGGTTTTAATGATGAATTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGTGTGAGTCACTAAACCATGTAATGGTTTTAATGATGAATTCT  900

seq1  GATCATGCTTTCAAAGCCTGACACTACACCTCTCTAATGATGTGTACTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGCTTTCAAAGCCTGACACTACACCTCTCTAATGATGTGTACTGT  950

seq1  CCC-TTTTGTACAGTGTTTCAGACATACCATGATATTTTAAAGCACATTT  999
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTTGTACAGTGTTTCAGACATACCATGATATTTTAAAGCACATTT  1000

seq1  AACCCCGAAAAAGCCAGTCATTAATTTGACAGAAAAATTCTCCATCCCTT  1049
       ||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  GACCCCGAAAAAGCCAGTCATTTATTTGACAGAAAAA-TCTCCATCCCTT  1049

seq1  CTTATGTAAATCATAATTTCTGCATCAGGCTAGTCC-TGGCAATCTATTA  1098
      |||||||||||||||  |||||||||| |||||||| ||||| || ||| 
seq2  CTTATGTAAATCATA--TTCTGCATCA-GCTAGTCCTTGGCATTCCATTT  1096

seq1  AGAGTGAAAGTTAAAGTTCTAAGTCTGGTCTGGG  1132
      ||||||||||||||   ||| |||||||||||||
seq2  AGAGTGAAAGTTAA--GTCT-AGTCTGGTCTGGG  1127