BAC Information

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BAC

Clone NameB6Ng01-103F06
Chromosome14 (Build37)
Map Location 67,170,651 - 67,171,751
singlet/doubletsinglet
Overlap genenone
Upstream geneElp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4
Downstream geneAdra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416, LOC100043046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103F06.bB6Ng01-103F06.g
ACCDH911953DH911954
length1,1231,150
definitionDH911953|Mus musculus domesticus DNA, BAC clone: B6Ng01-103F06, 5' end.DH911954|Mus musculus domesticus DNA, BAC clone: B6Ng01-103F06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagtgacttttgtataaatggatctatgagaaatgtgagatg
aacagaaaacatgcattcatctgggtggtgctagatgtaaaacaaaaaat
gtgcagacacacacacacacactgtgaaacagctcctgtctcctgcagcc
catcatgtgttagagagcatctttaatgttggtactcaccttcttatttc
agataactctctctccatctcttcataaacggctgccttctgaaacctga
ttttaccaagaagcttcagagcagttaaaagtgaagggccagatcatttt
attatctatctaatgtgtgtgttactaggcttattagtttcctatttgtt
gttgatgtcccactgatgaagcttttgaatattgtatcctaatactgtct
tccaagagggttttaactttgtggttttgcaaagtgaaagatgcttttta
ctatacagatatcacgagctaacagaactggatgcacttaggacagtgct
gtgtatgcaataaacctctcaatgaattatagctattgttatgcttacca
gagtcctttgggggggtttcaactgttgcctttcatgtggaagtataaag
aatgtcactataatgtagatgacagagattcaattatttagtagtcattt
aaccttaagtactccatatccttgttcatttttattgtcaacttggcata
gcctggagttacctaagaacagggagccttacctgtaaaattgccccagt
ctgatagacttgttgacatatctgtgtgagagagtcttgactgatgcttg
atatgggaagtcttagtctactgtgggaggcaccgtccctagcaggaggg
ctaagaaagatagctgggcatgccccattgagcaagacagtgagcagtat
tttccagaattgtgcttcagctcctgccccaacttccttcatgatggatt
atgaattagatataagtaaataaccctttctctcagttgttttgttttta
ctgtgattttactgtaacagaaagcaaactagaacatgagtgtctggcat
gggatgctggacatgaaattagtgaagtcacagctaatgttctcatagaa
cgagtctactaagaagagagcat
gaattctcatctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gccccccaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagattgagtttatgaaattcctaagaaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgcaaaacacatgaaactgaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacagtttggagctgagacaaa
aggatggaccatctagtgattgccatatccagggatccatcccataatca
gcttctaaacgctgacaccattgcatacattagcaagattttgctgaaag
gacccagatatagctatctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctatggatgggtcacatggcccccatg
aggagctagagaagtacccagagctaagggactgcaccctatatgtggac
acatatgactacagtacccgagtcttgtctctagctgcatatgtatcaaa
gatgtctagtcagcatcactgaagagaggccttggactgcacttatatgc
cagtacagggaacgccaggccaaatgggggagtgggtggataagttagat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_67170651_67171751
seq2: B6Ng01-103F06.b_93_1170 (reverse)

seq1  ATGCTCTCTTCTTAGGTAGACCTTCTGTTCTATGAGGACACTAGCTGTGA  50
      |||||||||||||| ||||||  || |||||||||| ||| |||||||||
seq2  ATGCTCTCTTCTTA-GTAGAC--TC-GTTCTATGAGAACATTAGCTGTGA  46

seq1  CCTTTCACCTAATTTCATGTCCAGCCAATCCCATGCCAGACACCTCATGT  100
      |  |||| |||||||||||||||||  ||||||||||||||| |||||||
seq2  C--TTCA-CTAATTTCATGTCCAGC--ATCCCATGCCAGACA-CTCATGT  90

seq1  TCTAGTTTGCTTTCTGTTACAGTAAAAATCACAGTAAAAAACAAAAACAA  150
      ||||||||||||||||||||||| ||||||||||||||||   |||||||
seq2  TCTAGTTTGCTTTCTGTTACAGT-AAAATCACAGTAAAAA--CAAAACAA  137

seq1  CTTGAGGAGGAAAGGGTTTATTTAACTTATATTCCTAATTCATAATCCAT  200
      | ||||   ||||||| |||||| ||||||||  ||||||||||||||||
seq2  C-TGAG--AGAAAGGG-TTATTT-ACTTATAT--CTAATTCATAATCCAT  180

seq1  CATTGAAGGAAGTTGGGGCAGGAGCCTGAAGCACAATTCTGGAAAAATAC  250
      || ||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  CA-TGAAGGAAGTTGGGGCAGGAG-CTGAAGCACAATTCTGG-AAAATAC  227

seq1  TGCTCACTGTCTTGCTCAATGGGGCATGCCCAGCTATCTTTCTTAGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACTGTCTTGCTCAATGGGGCATGCCCAGCTATCTTTCTTAGCCCT  277

seq1  CCTGCTAGGGACGGTGCCTCCCACAGTAGACTAAGACTTCCCATATCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTAGGGACGGTGCCTCCCACAGTAGACTAAGACTTCCCATATCAAG  327

seq1  CATCAGTCAAGACTCTCTCACACAGATATGTCAACAAGTCTATCAGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTCAAGACTCTCTCACACAGATATGTCAACAAGTCTATCAGACTG  377

seq1  GGGCAATTTTACAGGTAAGGCTCCCTGTTCTTAGGTAACTCCAGGCTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATTTTACAGGTAAGGCTCCCTGTTCTTAGGTAACTCCAGGCTATG  427

seq1  CCAAGTTGACAATAAAAATGAACAAGGATATGGAGTACTTAAGGTTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTGACAATAAAAATGAACAAGGATATGGAGTACTTAAGGTTAAAT  477

seq1  GACTACTAAATAATTGAATCTCTGTCATCTACATTATAGTGACATTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACTAAATAATTGAATCTCTGTCATCTACATTATAGTGACATTCTTT  527

seq1  ATACTTCCACATGAAAGGCAACAGTTGAAACCCCCCCAAAGGACTCTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCCACATGAAAGGCAACAGTTGAAACCCCCCCAAAGGACTCTGGT  577

seq1  AAGCATAACAATAGCTATAATTCATTGAGAGGTTTATTGCATACACAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAACAATAGCTATAATTCATTGAGAGGTTTATTGCATACACAGCA  627

seq1  CTGTCCTAAGTGCATCCAGTTCTGTTAGCTCGTGATATCTGTATAGTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTAAGTGCATCCAGTTCTGTTAGCTCGTGATATCTGTATAGTAAA  677

seq1  AAGCATCTTTCACTTTGCAAAACCACAAAGTTAAAACCCTCTTGGAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTTTCACTTTGCAAAACCACAAAGTTAAAACCCTCTTGGAAGAC  727

seq1  AGTATTAGGATACAATATTCAAAAGCTTCATCAGTGGGACATCAACAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAGGATACAATATTCAAAAGCTTCATCAGTGGGACATCAACAACA  777

seq1  AATAGGAAACTAATAAGCCTAGTAACACACACATTAGATAGATAATAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAACTAATAAGCCTAGTAACACACACATTAGATAGATAATAAAA  827

seq1  TGATCTGGCCCTTCACTTTTAACTGCTCTGAAGCTTCTTGGTAAAATCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGGCCCTTCACTTTTAACTGCTCTGAAGCTTCTTGGTAAAATCAG  877

seq1  GTTTCAGAAGGCAGCCGTTTATGAAGAGATGGAGAGAGAGTTATCTGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGAAGGCAGCCGTTTATGAAGAGATGGAGAGAGAGTTATCTGAAA  927

seq1  TAAGAAGGTGAGTACCAACATTAAAGATGCTCTCTAACACATGATGGGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGGTGAGTACCAACATTAAAGATGCTCTCTAACACATGATGGGCT  977

seq1  GCAGGAGACAGGAGCTGTTTCACAGTGTGTGTGTGTGTGTCTGCACATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGACAGGAGCTGTTTCACAGTGTGTGTGTGTGTGTCTGCACATTT  1027

seq1  TTTGTTTTACATCTAGCACCACCCAGATGAATGCATGTTTTCTGTTCATC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTACATCTAGCACCACCCAGATGAATGCATGTTTTCTGTTCATC  1077

seq1  T  1101
      |
seq2  T  1078