BAC Information

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BAC

Clone NameB6Ng01-104A23
Chromosome14 (Build37)
Map Location 82,883,517 - 83,022,186
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104A23.bB6Ng01-104A23.g
ACCDH912467DH912468
length1,1611,076
definitionDH912467|Mus musculus domesticus DNA, BAC clone: B6Ng01-104A23, 5' end.DH912468|Mus musculus domesticus DNA, BAC clone: B6Ng01-104A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,883,517 - 82,884,693)(83,021,120 - 83,022,186)
sequence
gaattcaactttggtgaaattttataaattgttcactgcatttgaaaata
tctgaatataaattccagtttctcaaaatgacaggcaatctgtatcattt
gagatatcttttctttcatgattccatagaacattttttttttctgcagc
aggtggttggaaagatcatatgaaacttgatgcaaatataaaacaattat
tgagaaatgtaattaatacagtaaattttatttaactaaaaagaaaagaa
actagtaacacagactgggtgttgatcatgaatgtgtaagtgacttcaga
taaacaatcatctgtcttagagattgagcttcaatggctgctctataaat
gcacaggttagaataaatgaggtactaagatctctccatctatccctgta
gttttattatcggaaatttaagagcttgtcaaaagcctgtgacttccatt
ttaagcttgtgtggcttgtggcttagagaagttgggagttccccacggca
aagaccattcatcgtcttagtcttcctatgtttttcagtacatttggcta
ttaaatatgttcaatcctatcattctctgctaataatatgagggtctttg
caagaatatgagcagccatcaccataacctttgcaaaagcagaaaacctg
tgtgcttctagaattaatggtttcttcctcttgtttttgctgactaaagg
tgttctctgagagtattatgcacatataaaaattctgttcactttctctg
ataagccttattatttccctcacacttctgctacctattttcccctccct
ccaggttctttctcaagttttacaggcatccacttttgttaactactgat
gctaacacaaatcttctgcacaactatggtttggcaattatcctttagag
cccagttttctcaccattgggcaaacataagacattaatacgcacagccc
agaatcaatcagttgtaagagtaagcccaagtcccacattgatccagatt
tgtgatgagagagcagtcagtgaatgcagctgtgtgagatcatgttaaag
tgtttttgcagcactgagaattcatttcataggcccttctctgtcttctg
tattctggctatgttttctgcaagttattgtgcttgaatttggcgatgat
tgaaaatgctt
gaattcattggtagcttctacaactccaagggttatttagtctggtctaa
tctgaatggttatcaacaagtcccctttaaaaggaacatgaatattttag
aagaagacaagcaacaaagtaacattttgagaatgagatgcatatgtcaa
agaaacaattgggtttgagtcactgaacaaagtgctattttttatagttc
tgaacaaggcattggcttttaacgtgatgactactgtccataaaacatgg
aaatgtattttagtttcatttaatttttacctatatgtatgctcctagtt
gtatttcatcaatagctacttaagaagtcaatgtatgtacactatatttt
atgtataacaaacatacaaatattaaaatgtatcaaaaaacaccaaaaca
gttttgacaatacataaaacaacattctccttaatgcactggcaatgaga
ttgaacaatgaaaacaattctattcactagtgtgttacttcattttttta
attagtaatttataccactgctttgctagaattatttgcaatacaatgtt
ttaaaattttcaacatgaaaaagattatcaacatagcataacaaaatata
ataagataaaggaaaaccatcattttggatttggaaaaaaaacaaccaat
gactggcgaaagagtttcaagagcagacaaaagaattagagatccatgtg
ttctcacattcaggtgtcatataaaaatactttactgagagctgtattat
ccatgaagatgatctggtggagactgctgttggccatgagcttgcccctt
cagtctctgttagctcatctgtgctttgcttagtagattcagagagtcat
gtttttctgatttcttccatatcctctgtcttggagaagctttcagcctc
atcttccatggggttccttgtgctctgagggtagggatttgatgaggacc
tcccatttacaattctcttttcttcatattatctggctgggagtatctgc
aatctgttcccatcccatctgtacagaaagaaaggttcttattgaatgaa
tggcttaataggactgagctactagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82883517_82884693
seq2: B6Ng01-104A23.b_33_1193

seq1  GAATTCAACTTTGGTGAAATTTTATAAATTGTTCACTGCATTTGAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTGGTGAAATTTTATAAATTGTTCACTGCATTTGAAAATA  50

seq1  TCTGAATATAAATTCCAGTTTCTCAAAATGACAGGCAATCTGTATCATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATAAATTCCAGTTTCTCAAAATGACAGGCAATCTGTATCATTT  100

seq1  GAGATATCTTTTCTTTCATGATTCCATAGAACATTTTTTTTTTCTGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATCTTTTCTTTCATGATTCCATAGAACATTTTTTTTTTCTGCAGC  150

seq1  AGGTGGTTGGAAAGATCATATGAAACTTGATGCAAATATAAAACAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTTGGAAAGATCATATGAAACTTGATGCAAATATAAAACAATTAT  200

seq1  TGAGAAATGTAATTAATACAGTAAATTTTATTTAACTAAAAAGAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATGTAATTAATACAGTAAATTTTATTTAACTAAAAAGAAAAGAA  250

seq1  ACTAGTAACACAGACTGGGTGTTGATCATGAATGTGTAAGTGACTTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAACACAGACTGGGTGTTGATCATGAATGTGTAAGTGACTTCAGA  300

seq1  TAAACAATCATCTGTCTTAGAGATTGAGCTTCAATGGCTGCTCTATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATCATCTGTCTTAGAGATTGAGCTTCAATGGCTGCTCTATAAAT  350

seq1  GCACAGGTTAGAATAAATGAGGTACTAAGATCTCTCCATCTATCCCTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGTTAGAATAAATGAGGTACTAAGATCTCTCCATCTATCCCTGTA  400

seq1  GTTTTATTATCGGAAATTTAAGAGCTTGTCAAAAGCCTGTGACTTCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTATCGGAAATTTAAGAGCTTGTCAAAAGCCTGTGACTTCCATT  450

seq1  TTAAGCTTGTGTGGCTTGTGGCTTAGAGAAGTTGGGAGTTCCCCACGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTTGTGTGGCTTGTGGCTTAGAGAAGTTGGGAGTTCCCCACGGCA  500

seq1  AAGACCATTCATCGTCTTAGTCTTCCTATGTTTTTCAGTACATTTGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCATTCATCGTCTTAGTCTTCCTATGTTTTTCAGTACATTTGGCTA  550

seq1  TTAAATATGTTCAATCCTATCATTCTCTGCTAATAATATGAGGGTCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATGTTCAATCCTATCATTCTCTGCTAATAATATGAGGGTCTTTG  600

seq1  CAAGAATATGAGCAGCCATCACCATAACCTTTGCAAAAGCAGAAAACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATATGAGCAGCCATCACCATAACCTTTGCAAAAGCAGAAAACCTG  650

seq1  TGTGCTTCTAGAATTAATGGTTTCTTCCTCTTGTTTTTGCTGACTAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCTAGAATTAATGGTTTCTTCCTCTTGTTTTTGCTGACTAAAGG  700

seq1  TGTTCTCTGAGAGTATTATGCACATATAAAAATTCTGTTCACTTTCTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTGAGAGTATTATGCACATATAAAAATTCTGTTCACTTTCTCTG  750

seq1  ATAAGCCTTATTATTTCCCTCACACTTCTGCTACCTATTTTCCCCTCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCTTATTATTTCCCTCACACTTCTGCTACCTATTTTCCCCTCCCT  800

seq1  CCAGGTTCTTTCTCAAGTTTTACAGGCATCCACTTTTGTTAACTACTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTCTTTCTCAAGTTTTACAGGCATCCACTTTTGTTAACTACTGAT  850

seq1  GCTAACACAAATCTTCTGCACAACTATGGTTTGGCAATTATCCTTTAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACACAAATCTTCTGCACAACTATGGTTTGGCAATTATCCTTTAGAG  900

seq1  CCCAGTTTTCTCACCATTGGGCAAACATAAGACAATTAATACGCACAGCC  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCCAGTTTTCTCACCATTGGGCAAACATAAGAC-ATTAATACGCACAGCC  949

seq1  CAGAATCAATCAGTTGTTAAGAGTTAAGCCCAAGTCCCACATTGATCCAA  1000
      |||||||||||||||| |||||| |||||||||||||||||||||||| |
seq2  CAGAATCAATCAGTTG-TAAGAG-TAAGCCCAAGTCCCACATTGATCC-A  996

seq1  GATTTGTGATTGAGAGAGCAGTCCAGTGAATTGCAGCTGTTGTGAGATCA  1050
      ||||||||| |||||||||||| ||||||| |||||||| ||||||||||
seq2  GATTTGTGA-TGAGAGAGCAGT-CAGTGAA-TGCAGCTG-TGTGAGATCA  1042

seq1  TGTTAAAAGTGTTTTTGCCAAGCACTGAAGATATCATTTCATAGCCCTTT  1100
      |||| |||||||||||||  ||||||| |||  ||||||||||| || ||
seq2  TGTT-AAAGTGTTTTTGC--AGCACTG-AGAATTCATTTCATAGGCCCTT  1088

seq1  CTCCTGTCTTCTGTATTCT-GCTATGTTTTCTGCAAAGTTTATTGTGGCA  1149
      || |||||||||||||||| ||||||||||||||||   ||||||| || 
seq2  CT-CTGTCTTCTGTATTCTGGCTATGTTTTCTGCAA--GTTATTGT-GCT  1134

seq1  TAGGGATTT-GCGATGATGGAAAATGCTT  1177
      |  | |||| |||||||| ||||||||||
seq2  T--GAATTTGGCGATGATTGAAAATGCTT  1161

seq1: chr14_83021120_83022186
seq2: B6Ng01-104A23.g_70_1140 (reverse)

seq1  ACTAGTAGCTCAGTGCCTTATTTAGCCATCATCAT------AGGACCTTT  44
      ||||||||||||||  | |||| ||||||  ||||      || ||||||
seq2  ACTAGTAGCTCAGT--CCTATTAAGCCAT--TCATTCAATAAGAACCTTT  46

seq1  C-TTCTGTAACAGATGGGATGGGAACAGA-TGCAGATACTCACAGCCAGA  92
      | |||||| |||||||||||||||||||| ||||||||||| ||||||||
seq2  CTTTCTGT-ACAGATGGGATGGGAACAGATTGCAGATACTCCCAGCCAGA  95

seq1  TAATATGAAG-AAAGAGAATTGTAAATGGGAGGTCCTCATCAAATCCCTA  141
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAATATGAAGAAAAGAGAATTGTAAATGGGAGGTCCTCATCAAATCCCTA  145

seq1  CCCTCAGAGCACAAGGAACCCCATGGAAGATGAGGCTGAAAGCTTCTCCA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGAGCACAAGGAACCCCATGGAAGATGAGGCTGAAAGCTTCTCCA  195

seq1  AGACAGAGGATATGGAAGAAATCAGAAAAACATGACTCTCTGAATCTACT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGGATATGGAAGAAATCAGAAAAACATGACTCTCTGAATCTACT  245

seq1  AAGCAAAGCACAGATGAGCTAACAGAGACTGAAGGGGCAAGCTCATGGCC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGCACAGATGAGCTAACAGAGACTGAAGGGGCAAGCTCATGGCC  295

seq1  AACAGCAGTCTCCACCAGATCATCTTCATGGATAATACAGCTCTCAGTAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGTCTCCACCAGATCATCTTCATGGATAATACAGCTCTCAGTAA  345

seq1  AGTATTTTTATATGACACCTGAATGTGAGAACACATGGATCTCTAATTCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTTATATGACACCTGAATGTGAGAACACATGGATCTCTAATTCT  395

seq1  TTTGTCTGCTCTTGAAACTCTTTCGCCAGTCATTGGTTGTTTTTTTTCCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGCTCTTGAAACTCTTTCGCCAGTCATTGGTTGTTTTTTTTCCA  445

seq1  AATCCAAAATGATGGTTTTCCTTTATCTTATTATATTTTGTTATGCTATG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAAATGATGGTTTTCCTTTATCTTATTATATTTTGTTATGCTATG  495

seq1  TTGATAATCTTTTTCATGTTGAAAATTTTAAAACATTGTATTGCAAATAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATCTTTTTCATGTTGAAAATTTTAAAACATTGTATTGCAAATAA  545

seq1  TTCTAGCAAAGCAGTGGTATAAATTACTAATTAAAAAAATGAAGTAACAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCAAAGCAGTGGTATAAATTACTAATTAAAAAAATGAAGTAACAC  595

seq1  ACTAGTGAATAGAATTGTTTTCATTGTTCAATCTCATTGCCAGTGCATTA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGAATAGAATTGTTTTCATTGTTCAATCTCATTGCCAGTGCATTA  645

seq1  AGGAGAATGTTGTTTTATGTATTGTCAAAACTGTTTTGGTGTTTTTTGAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATGTTGTTTTATGTATTGTCAAAACTGTTTTGGTGTTTTTTGAT  695

seq1  ACATTTTAATATTTGTATGTTTGTTATACATAAAATATAGTGTACATACA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAATATTTGTATGTTTGTTATACATAAAATATAGTGTACATACA  745

seq1  TTGACTTCTTAAGTAGCTATTGATGAAATACAACTAGGAGCATACATATA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTCTTAAGTAGCTATTGATGAAATACAACTAGGAGCATACATATA  795

seq1  GGTAAAAATTAAATGAAACTAAAATACATTTCCATGTTTTATGGACAGTA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAATTAAATGAAACTAAAATACATTTCCATGTTTTATGGACAGTA  845

seq1  GTCATCACGTTAAAAGCCAATGCCTTGTTCAGAACTATAAAAAATAGCAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCACGTTAAAAGCCAATGCCTTGTTCAGAACTATAAAAAATAGCAC  895

seq1  TTTGTTCAGTGACTCAAACCCAATTGTTTCTTTGACATATGCATCTCATT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAGTGACTCAAACCCAATTGTTTCTTTGACATATGCATCTCATT  945

seq1  CTCAAAATGTTACTTTGTTGCTTGTCTTCTTCTAAAATATTCATGTTCCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATGTTACTTTGTTGCTTGTCTTCTTCTAAAATATTCATGTTCCT  995

seq1  TTTAAAGGGGACTTGTTGATAACCATTCAGATTAGACCAGACTAAATAAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGGGACTTGTTGATAACCATTCAGATTAGACCAGACTAAATAAC  1045

seq1  CCTTGGAGTTGTAGAAGCTACCAATG  1067
      ||||||||||||||||||||||||||
seq2  CCTTGGAGTTGTAGAAGCTACCAATG  1071