BAC Information

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BAC

Clone NameB6Ng01-104B11
Chromosome14 (Build37)
Map Location 57,971,333 - 58,148,047
singlet/doubletdoublet
Overlap geneCryl1, LOC668090, AU040096, Ift88, Il17d
Upstream geneAtp12a, Rnf17, Cenpj, Parp4, LOC100042788, 4930548G07Rik, Pspc1, LOC100043499, 9830124H08Rik, LOC100042797, LOC219106, LOC668118, Zmym2, LOC100042817, B020004C17Rik, Gja3, Gjb2, LOC100043515, Gjb6, LOC668140
Downstream geneN6amt2, Xpo4, Lats2, Sap18, F630043A04Rik, Mrp63, Zdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104B11.bB6Ng01-104B11.g
ACCDH912491DH912492
length986963
definitionDH912491|Mus musculus domesticus DNA, BAC clone: B6Ng01-104B11, 5' end.DH912492|Mus musculus domesticus DNA, BAC clone: B6Ng01-104B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,147,065 - 58,148,047)(57,971,333 - 57,972,290)
sequence
gaattccacctacagtgatctttcttgtgctgtggtatttctgactctac
atctgttttcctacccatcttcctgagcttctactttgcctatagggatg
tgggcatctcaggcctccatccccagaggagacggctctgggaatccaga
agaaaagcaaattccccacacattcaggaaccatatatgcagtggtgtag
aatatgcacagaacctctcgtactctcctctagacttcagccatctctcc
aggcttgcaatgtgacctgacctagccatgctctgtatgctgctgcgcca
ttgggagtcatgatgggagagactgcacactctgccatgcaagctttctc
agataatcttgcaatgcagccggttggctctgtggatgcacaatctgcag
atcagaggaaggttgagagcaccacctctgcagcgggtactaaatcctgc
agctgagctggtgggatttgtgcaaccctctcacagatgagcctctgcac
ttcctggaatgcaccccccacccccttccctgacccacaggttttttttt
tttttttttttatttcaatcccatagatctcattatgggtggttgtgagc
cacccatgtggttgctgggatttgaactcatgacctccagaagaatagtc
agtgctcttaactgctgagccctggaatgtactttttctaccttctttaa
ctcggaggtgagtgacaatggaggaagtgcccagagaggcaggaaccagg
gctggcttcaacagcatctgcaacaatggccctgcatggtcccctgaagc
ctagcttccttctagtcagcataagctaccttgacccccattttctcaca
gggcagaatgggggtgataacttcatcacctgctgtgaagactgcatggg
ataaacaaggggcctgaagctatgtgatcttcgagtggtagatggaaact
gtcccctccttcatcacttcaagtatgggggggggg
gaattccacttctgcctgggatgtaaacagcagtttgtatgttacttttg
tccttggtatgcatgtgtatggagaacatggatatacaggctttgctggc
ctccacagcttcaggcagccattgaagtcttgggaattacctgtgatgag
ccaaggggaagaaggctgctgtgtttgtttgttctgtgcaaaacgcacct
gcaggttgacttcttggatggaatgccattccataaaccatcaatctaaa
gggaagaattcagtgggaaattacaggaaacacacacacaaaaagaaaga
aaaacagccgatggaactagatccagtgaaaatctagagacagggacagt
taaacaaggaatttaagtaaagatcacgatcttaaatgttctggtgacaa
aatgacaagggatttcagaagagagatgggtgctgtggcaaaatgttggg
tgagaatggcagagaaaacagcctttaacacatagtagctattcttcaag
atggaccctggtgacaccggaaagcatagctttgtgtacaaagctcatgg
tgaacaggtctggcctatgtgacctagagaatgaggaaggaatggcctca
tgacctctgagacttagtgttcgtaatgtgcgactctattgtgaaggcag
ccagtcagtagatctatgagtctcacttggcagatgtgagaagtctatct
tgaaaatggtgccccaggcttggctgacagcagccctggccaatatcagt
gccaagagagaacagagccagagccacttcacaaagcatctccaaatcaa
aatatgtttaccattgctttaaaactgcacaccttccagctgatggagca
tgcagcaataaataacacagtcaggcacatcatcagactacagaaatgag
gacccaataaagctgaaaatgggtagaaatcacaggagatagaaagaaag
acgtaagaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_58147065_58148047
seq2: B6Ng01-104B11.b_41_1026 (reverse)

seq1  CCCCCCCCCCATACTTGAGGTGACTGAAGG-GGGGACAGTTTCCATCTAC  49
      |||||||||||||||||| |||| |||||| |||||||||||||||||||
seq2  CCCCCCCCCCATACTTGAAGTGA-TGAAGGAGGGGACAGTTTCCATCTAC  49

seq1  CACTCGAAGATCACATAGCTTCAGGCCCCTTGTTTATCCCATGCAGTCTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGAAGATCACATAGCTTCAGGCCCCTTGTTTATCCCATGCAGTCTT  99

seq1  CACAGCA-GTGATG-AGTTATCACCCCCA-TCTGCCCTGTGAGAAAATGG  146
      ||||||| |||||| |||||||||||||| ||||||||||||||||||||
seq2  CACAGCAGGTGATGAAGTTATCACCCCCATTCTGCCCTGTGAGAAAATGG  149

seq1  GGGTC-AGGTAGCTTATGCTGACTAGAAGGAAGCTAGGCTTCAGGGGACC  195
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAAGGTAGCTTATGCTGACTAGAAGGAAGCTAGGCTTCAGGGGACC  199

seq1  ATGCAGGGCCATTGTTGCAGATGCTGTTGAAGCCAGCCCTGGTTCCTGCC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGGCCATTGTTGCAGATGCTGTTGAAGCCAGCCCTGGTTCCTGCC  249

seq1  TCTCTGGGCACTTCCTCCATTGTCACTCACCTCCTGAGTTAAAGAAGGTA  295
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTCTGGGCACTTCCTCCATTGTCACTCACCTCC-GAGTTAAAGAAGGTA  298

seq1  GAAAAAGTACATTCCAGGGCTCAGCAGTTAAGAGCACTGACTATTCTTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGTACATTCCAGGGCTCAGCAGTTAAGAGCACTGACTATTCTTCT  348

seq1  GGAGGTCATGAGTTCAAATCCCAGCAACCACATGGGTGGCTCACAACCAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCATGAGTTCAAATCCCAGCAACCACATGGGTGGCTCACAACCAC  398

seq1  CCATAATGAGATCTATGGGATTGAAATAAAAAAAAAAAAAAAAAAAACCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATGAGATCTATGGGATTGAAATAAAAAAAAAAAAAAAAAAAACCT  448

seq1  GTGGGTCAGGGAAGGGGGTGGGGGGTGCATTCCAGGAAGTGCAGAGGCTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCAGGGAAGGGGGTGGGGGGTGCATTCCAGGAAGTGCAGAGGCTC  498

seq1  ATCTGTGAGAGGGTTGCACAAATCCCACCAGCTCAGCTGCAGGATTTAGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGAGAGGGTTGCACAAATCCCACCAGCTCAGCTGCAGGATTTAGT  548

seq1  ACCCGCTGCAGAGGTGGTGCTCTCAACCTTCCTCTGATCTGCAGATTGTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCTGCAGAGGTGGTGCTCTCAACCTTCCTCTGATCTGCAGATTGTG  598

seq1  CATCCACAGAGCCAACCGGCTGCATTGCAAGATTATCTGAGAAAGCTTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACAGAGCCAACCGGCTGCATTGCAAGATTATCTGAGAAAGCTTGC  648

seq1  ATGGCAGAGTGTGCAGTCTCTCCCATCATGACTCCCAATGGCGCAGCAGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGAGTGTGCAGTCTCTCCCATCATGACTCCCAATGGCGCAGCAGC  698

seq1  ATACAGAGCATGGCTAGGTCAGGTCACATTGCAAGCCTGGAGAGATGGCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGCATGGCTAGGTCAGGTCACATTGCAAGCCTGGAGAGATGGCT  748

seq1  GAAGTCTAGAGGAGAGTACGAGAGGTTCTGTGCATATTCTACACCACTGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTAGAGGAGAGTACGAGAGGTTCTGTGCATATTCTACACCACTGC  798

seq1  ATATATGGTTCCTGAATGTGTGGGGAATTTGCTTTTCTTCTGGATTCCCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGGTTCCTGAATGTGTGGGGAATTTGCTTTTCTTCTGGATTCCCA  848

seq1  GAGCCGTCTCCTCTGGGGATGGAGGCCTGAGATGCCCACATCCCTATAGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGTCTCCTCTGGGGATGGAGGCCTGAGATGCCCACATCCCTATAGG  898

seq1  CAAAGTAGAAGCTCAGGAAGATGGGTAGGAAAACAGATGTAGAGTCAGAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAGAAGCTCAGGAAGATGGGTAGGAAAACAGATGTAGAGTCAGAA  948

seq1  ATACCACAGCACAAGAAAGATCACTGTAGGTGGAATTC  983
      ||||||||||||||||||||||||||||||||||||||
seq2  ATACCACAGCACAAGAAAGATCACTGTAGGTGGAATTC  986

seq1: chr14_57971333_57972290
seq2: B6Ng01-104B11.g_69_1031

seq1  GAATTCCACTTCTGCCTGGGATGTAAACAGCAGTTTGTATGTTACTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTCTGCCTGGGATGTAAACAGCAGTTTGTATGTTACTTTTG  50

seq1  TCCTTGGTATGCATGTGTATGGAGAACATGGATATACAGGCTTTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGTATGCATGTGTATGGAGAACATGGATATACAGGCTTTGCTGGC  100

seq1  CTCCACAGCTTCAGGCAGCCATTGAAGTCTTGGGAATTACCTGTGATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGCTTCAGGCAGCCATTGAAGTCTTGGGAATTACCTGTGATGAG  150

seq1  CCAAGGGGAAGAAGGCTGCTGTGTTTGTTTGTTCTGTGCAAAACGCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGGAAGAAGGCTGCTGTGTTTGTTTGTTCTGTGCAAAACGCACCT  200

seq1  GCAGGTTGACTTCTTGGATGGAATGCCATTCCATAAACCATCAATCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTGACTTCTTGGATGGAATGCCATTCCATAAACCATCAATCTAAA  250

seq1  GGGAAGAATTCAGTGGGAAATTACAGGAAACACACACACAAAAAGAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAATTCAGTGGGAAATTACAGGAAACACACACACAAAAAGAAAGA  300

seq1  AAAACAGCCGATGGAACTAGATCCAGTGAAAATCTAGAGACAGGGACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCCGATGGAACTAGATCCAGTGAAAATCTAGAGACAGGGACAGT  350

seq1  TAAACAAGGAATTTAAGTAAAGATCACGATCTTAAATGTTCTGGTGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAGGAATTTAAGTAAAGATCACGATCTTAAATGTTCTGGTGACAA  400

seq1  AATGACAAGGGATTTCAGAAGAGAGATGGGTGCTGTGGCAAAATGTTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAGGGATTTCAGAAGAGAGATGGGTGCTGTGGCAAAATGTTGGG  450

seq1  TGAGAATGGCAGAGAAAACAGCCTTTAACACATAGTAGCTATTCTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGGCAGAGAAAACAGCCTTTAACACATAGTAGCTATTCTTCAAG  500

seq1  ATGGACCCTGGTGACACCGGAAAGCATAGCTTTGTGTACAAAGCTCATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCCTGGTGACACCGGAAAGCATAGCTTTGTGTACAAAGCTCATGG  550

seq1  TGAACAGGTCTGGCCTATGTGACCTAGAGAATGAGGAAGGAATGGCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGGTCTGGCCTATGTGACCTAGAGAATGAGGAAGGAATGGCCTCA  600

seq1  TGACCTCTGAGACTTAGTGTTCGTAATGTGCGACTCTATTGTGAAGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTGAGACTTAGTGTTCGTAATGTGCGACTCTATTGTGAAGGCAG  650

seq1  CCAGTCAGTAGATCTATGAGTCTCACTTGGCAGATGTGAGAAGTCTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCAGTAGATCTATGAGTCTCACTTGGCAGATGTGAGAAGTCTATCT  700

seq1  TGAAAATGGTGCCCCAGGCTTGGCTGACAGCAGCCCTGGCCAATATCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGGTGCCCCAGGCTTGGCTGACAGCAGCCCTGGCCAATATCAGT  750

seq1  GCCAAGAGAGAACAGAGCCAGAGCCACTTCACAAAGCATCTCCAAATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAGAGAACAGAGCCAGAGCCACTTCACAAAGCATCTCCAAATCAA  800

seq1  AATATGTTTACCATTGCTTTAAAACTGCACACCTTCCAGCTGATGGAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTTACCATTGCTTTAAAACTGCACACCTTCCAGCTGATGGAGCA  850

seq1  TGCAGCAATAAATAACACAGCCAGGCACATCATCAGACTACAGAAATGAG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCAGCAATAAATAACACAGTCAGGCACATCATCAGACTACAGAAATGAG  900

seq1  GACCCAATAAAGCTGAAAATGGGTAGAAATCACAGGA-AGA-AAAGAAAG  948
      ||||||||||||||||||||||||||||||||||||| | | ||||||||
seq2  GACCCAATAAAGCTGAAAATGGGTAGAAATCACAGGAGATAGAAAGAAAG  950

seq1  A---AAGAAAGAA  958
      |   |||||||||
seq2  ACGTAAGAAAGAA  963