BAC Information

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BAC

Clone NameB6Ng01-104F20
Chromosome14 (Build37)
Map Location 22,989,243 - 23,072,708
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104F20.bB6Ng01-104F20.g
ACCDH912687DH912688
length1,2031,132
definitionDH912687|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F20, 5' end.DH912688|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,989,243 - 22,990,475)(23,071,552 - 23,072,708)
sequence
gaattcaaacttatcctcagttgcgtaaggatatgaggccaggctggact
atataataatatatatataataagatcttgtgatttgctactcaagcatt
aactgaatatttatgatacagaaaacaatatgaatggtcaaattactctg
gaggctctagagatgagagacatgatttttttttcagggaccatgtaacg
taagtcaaattactgttcctctttagaactgcaatttttccttctcttaa
acgagatagttggttctaggccctgtttcccccaaattctggtttatgtg
tggtaagggaaacatggctttaggtgggaacacagactggtcttttaaca
ttttagtaactgtgtttatatttatagttggctggggttcattcagaaac
actggctatccttttatggccatcttacaaatttcatattttaatttcca
tgttaataggaaaagtgagtcaagggaaggaaaatatcagttgcacaata
gcacagccattgcagagattcagcaaaaatcatggttcccagctgagcca
aggttgttaatctccagaccacatgtgcaaggttatgagctaaagggagg
aaggcaccgtgcctcagctgtatgttaagtttccactggaattataggca
tatgcacagtcatcttctttaccattatcatgtttaaccgtttttttgat
tcactgagcaaaattaattttcacatacactgtatttgagtgacctttga
cctctgatttcctgaggtctttgtgaattaatatgtgcgcatgtttatac
atgtgctaaatgtgtagcctgacactagccactaagtttctacagatgtc
tctcatttggttcatttggtagcatgtaccctaacacatcttttttttca
agtatctgaaattcctgtgttcccccttggaatttcagtgaattctaatt
tggaaaaatgtcagagtcccctaagaacattgtaggatctgcctaactgt
accctcttggtacgtgatcagactgggtgggagccagctgcatgactagc
tagcttcagtgttgggactacagagcaggctttgtctctaccgagatagc
tcttttgaagagaaccaccacgcttcagcatccatgcctcaaggttgata
cttgtgatgccagtaaccatatctgtgatgatggcatactggaggtaatc
tgg
gaattctttgatggaatagaactcagttttcaaaaatgtttgaaattaca
gcttgacctggtagctcatgcctataatcccagaatccaagaggccaaag
cagaaatagtgtccaagaattcaaggccaccttgagatacatagtaaatt
ccaggccaacacaatctatagagtgagaccctgcctcagacaaatacaga
cggggaacaagaagtcagtatatacaatcttgtgttacaacaaaaagaca
agacacaaactggggtgttagctcccatttcaacagaaggcattatgatt
ctgagaaaagacagatgtgtacaaataaaaatatgtatgcggcagaaata
aaagataattcttcatatctttctgtctgtttgatatacttcctctggtt
gtatttcagagtcctatgtcaattaaaaatatttcaaatgggctggagct
caggggatggagggtcagataaattttgttatacaaggacaggtagataa
atagaatgaactcaggttgcaaaacaaaaaaaaacaaaacaaaaaaaaac
cctccatgataagaggatgatgaaggtgggcagagggtctacatctgctt
aatgtgctgaaggccagactctgaagaaataactatagaaacgccaccca
acctactgggtcttgctcaagattctcctgtgaacctaaccacagctgtt
gggtatgcaatgtttgctaaatcaaaatagaatatgcagtttagatattt
ttgtgttttgttttaattccttattgtttaaagaagtctatactccttgg
gatttatgggagcagcgttatttatcagcatttagagagcgcgggtggcc
actggcaccaccaagctcatgagatcttagtactcactttcaaacagcct
cagaaataacaatcaaatatgttagtgacatacactcattcaaagaaaat
cacaagctgttgtgtgtctctgcagctacatcaaagggctcttctgaaca
gccaacatctatgctttagatatcttcttcccagaatagtttctggaaca
aaaaatagaaagaatgctgattttggggatgctgtgggcctcagtgtaag
tattgctgtctttacgtccagccagcatgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22989243_22990475
seq2: B6Ng01-104F20.b_47_1249

seq1  GAATTCAAACTTATCCTCAGTTGCGTAAGGATATGAGGCCAGGCTGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTTATCCTCAGTTGCGTAAGGATATGAGGCCAGGCTGGACT  50

seq1  ATATAATAATATATATATAATAAGATCTTGTGATTTGCTACTCAAGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAATATATATATAATAAGATCTTGTGATTTGCTACTCAAGCATT  100

seq1  AACTGAATATTTATGATACAGAAAACAATATGAATGGTCAAATTACTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATATTTATGATACAGAAAACAATATGAATGGTCAAATTACTCTG  150

seq1  GAGGCTCTAGAGATGAGAGACATGATTTTTTTTTCAGGGACCATGTAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCTAGAGATGAGAGACATGATTTTTTTTTCAGGGACCATGTAACG  200

seq1  TAAGTCAAATTACTGTTCCTCTTTAGAACTGCAATTTTTCCTTCTCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAAATTACTGTTCCTCTTTAGAACTGCAATTTTTCCTTCTCTTAA  250

seq1  ACGAGATAGTTGGTTCTAGGCCCTGTTTCCCCCAAATTCTGGTTTATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGATAGTTGGTTCTAGGCCCTGTTTCCCCCAAATTCTGGTTTATGTG  300

seq1  TGGTAAGGGAAACATGGCTTTAGGTGGGAACACAGACTGGTCTTTTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGGGAAACATGGCTTTAGGTGGGAACACAGACTGGTCTTTTAACA  350

seq1  TTTTAGTAACTGTGTTTATATTTATAGTTGGCTGGGGTTCATTCAGAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTAACTGTGTTTATATTTATAGTTGGCTGGGGTTCATTCAGAAAC  400

seq1  ACTGGCTATCCTTTTATGGCCATCTTACAAATTTCATATTTTAATTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTATCCTTTTATGGCCATCTTACAAATTTCATATTTTAATTTCCA  450

seq1  TGTTAATAGGAAAAGTGAGTCAAGGGAAGGAAAATATCAGTTGCACAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATAGGAAAAGTGAGTCAAGGGAAGGAAAATATCAGTTGCACAATA  500

seq1  GCACAGCCATTGCAGAGATTCAGCAAAAATCATGGTTCCCAGCTGAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCCATTGCAGAGATTCAGCAAAAATCATGGTTCCCAGCTGAGCCA  550

seq1  AGGTTGTTAATCTCCAGACCACATGTGCAAGGTTATGAGCTAAAGGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTTAATCTCCAGACCACATGTGCAAGGTTATGAGCTAAAGGGAGG  600

seq1  AAGGCACCGTGCCTCAGCTGTATGTTAAGTTTCCACTGGAATTATAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACCGTGCCTCAGCTGTATGTTAAGTTTCCACTGGAATTATAGGCA  650

seq1  TATGCACAGTCATCTTCTTTACCATTATCATGTTTAACCGTTTTTTTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACAGTCATCTTCTTTACCATTATCATGTTTAACCGTTTTTTTGAT  700

seq1  TCACTGAGCAAAATTAATTTTCACATACACTGTATTTGAGTGACC-TTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCACTGAGCAAAATTAATTTTCACATACACTGTATTTGAGTGACCTTTGA  750

seq1  CCTCTGATTTCCTGAGGTCTTTGTGAATTAATATGTGCGCATGTTTATAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGATTTCCTGAGGTCTTTGTGAATTAATATGTGCGCATGTTTATAC  800

seq1  ATGTGCTAAATGTGTAGCCTGACACTAGCCACTAGGTTTCTACAGATGTC  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGTGCTAAATGTGTAGCCTGACACTAGCCACTAAGTTTCTACAGATGTC  850

seq1  TCTCATTTGGTTCATTTGGTAGCATGTACCCTAACACATCTTTTTTTTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTCATTTGGTTCATTTGGTAGCATGTACCCTAACACATCTTTTTTTTC-  899

seq1  AAGTATCTGAAATTCCTGTGTTCCCCCTTGGAATTTCAGTGAATTCTAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTGAAATTCCTGTGTTCCCCCTTGGAATTTCAGTGAATTCTAAT  949

seq1  TTGGAAAAATGTCAGAGTCCCCTAAAGAACATTGTAGGAATCTGCCTAAC  999
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  TTGGAAAAATGTCAGAGTCCCCT-AAGAACATTGTAGG-ATCTGCCTAAC  997

seq1  TGTACCCTCTTGATACAGTGATCAGACTGGGTGGGAGCCAGCTGCAATGA  1049
      |||||||||||| ||| |||||||||||||||||||||||||||| ||||
seq2  TGTACCCTCTTGGTAC-GTGATCAGACTGGGTGGGAGCCAGCTGC-ATGA  1045

seq1  CCTAGGCTAGCTTCAGTGTTTGGGACCTACAGAGCCAAGGCTTTGTCTCT  1099
       ||| ||||||||||||| |||||| |||||||||  |||||||||||||
seq2  -CTA-GCTAGCTTCAGTG-TTGGGA-CTACAGAGC--AGGCTTTGTCTCT  1089

seq1  ACACGAGATAGCTCTTTTGGAAGAGACACACCACGGCTTCAGCATCCCCA  1149
      || ||||||||||||||| |||||||  |||||| ||||||||||  |||
seq2  AC-CGAGATAGCTCTTTT-GAAGAGAACCACCAC-GCTTCAGCAT--CCA  1134

seq1  TGGCCTTCAGGTTGGATTACTTGTGGATGCCAGTAACACATTATCTGTTG  1199
      | ||||  ||||||   ||||||| |||||||||||| || |||||||  
seq2  T-GCCTCAAGGTTG--ATACTTGT-GATGCCAGTAAC-CA-TATCTGT--  1176

seq1  GATGAGATGGCATAGTCTGGAGGGGAAGATCTGG  1233
      |||  |||||||||  |||||||     ||||||
seq2  GAT--GATGGCATA--CTGGAGG---TAATCTGG  1203

seq1: chr14_23071552_23072708
seq2: B6Ng01-104F20.g_70_1201 (reverse)

seq1  CTGCATGCTGGTGCTGGAAACTGTAAGAGCAGCATATACTTTTAACCACT  50
      ||||||||||  ||||||    ||||   ||||| ||||||     ||||
seq2  CTGCATGCTG--GCTGGA---CGTAAAGACAGCA-ATACTT----ACACT  40

seq1  GAGCCACA-AGCAATCCCCAAATACAACCTTTTCCTTTCTTATTTTTTGT  99
      ||| | || ||| |||||||||  || | ||   ||||| ||||||||||
seq2  GAGGCCCACAGC-ATCCCCAAAATCAGCATT---CTTTC-TATTTTTTGT  85

seq1  TCAGAAAACTA-TCTGGGGAGAAGATTATCTAAAAGCAATAGATGGTTGG  148
      ||   |||||| |||||| |||||| ||||| ||||| |||||| |||||
seq2  TCCAGAAACTATTCTGGGAAGAAGA-TATCT-AAAGC-ATAGAT-GTTGG  131

seq1  CTGTTCAGAAGAGCCCCTTTGATGTAGCTGCAGAGACCACACAACAGCCT  198
      ||||||||||||| |||||||||||||||||||||| |||||||||| ||
seq2  CTGTTCAGAAGAG-CCCTTTGATGTAGCTGCAGAGA-CACACAACAG-CT  178

seq1  TGTGGATTTTTCTTTTGAATGAGTTGTATGTCACTAACATATTTGATTGT  248
      ||| ||||||   |||||||||| ||||||||||||||||||||||||||
seq2  TGT-GATTTT--CTTTGAATGAG-TGTATGTCACTAACATATTTGATTGT  224

seq1  TATTTCTGAGGCTTGTTTTGAAGTGAGTACTAAGATCTCATGAGCTTGGT  298
      |||||||||||| |||||  ||||||||||||||||||||||||||||||
seq2  TATTTCTGAGGC-TGTTTGAAAGTGAGTACTAAGATCTCATGAGCTTGGT  273

seq1  GGTGCCAGTGGCCACCCGCGCTCTCTAAATGCTGATAAATAACGCTGCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCAGTGGCCACCCGCGCTCTCTAAATGCTGATAAATAACGCTGCTC  323

seq1  CCATAAATCCCAAGGAGTATAGACTTCTTTAAACAATAAGGAATTAAAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAATCCCAAGGAGTATAGACTTCTTTAAACAATAAGGAATTAAAAC  373

seq1  AAAACACAAAAATATCTAAACTGCATATTCTATTTTGATTTAGCAAACAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACAAAAATATCTAAACTGCATATTCTATTTTGATTTAGCAAACAT  423

seq1  TGCATACCCAACAGCTGTGGTTAGGTTCACAGGAGAATCTTGAGCAAGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACCCAACAGCTGTGGTTAGGTTCACAGGAGAATCTTGAGCAAGAC  473

seq1  CCAGTAGGTTGGGTGGCGTTTCTATAGTTATTTCTTCAGAGTCTGGCCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAGGTTGGGTGGCGTTTCTATAGTTATTTCTTCAGAGTCTGGCCTT  523

seq1  CAGCACATTAAGCAGATGTAGACCCTCTGCCCACCTTCATCATCCTCTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACATTAAGCAGATGTAGACCCTCTGCCCACCTTCATCATCCTCTTA  573

seq1  TCATGGAGGGTTTTTTTTTGTTTTGTTTTTTTTTGTTTTGCAACCTGAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGAGGGTTTTTTTTTGTTTTGTTTTTTTTTGTTTTGCAACCTGAGT  623

seq1  TCATTCTATTTATCTACCTGTCCTTGTATAACAAAATTTATCTGACCCTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTATTTATCTACCTGTCCTTGTATAACAAAATTTATCTGACCCTC  673

seq1  CATCCCCTGAGCTCCAGCCCATTTGAAATATTTTTAATTGACATAGGACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCTGAGCTCCAGCCCATTTGAAATATTTTTAATTGACATAGGACT  723

seq1  CTGAAATACAACCAGAGGAAGTATATCAAACAGACAGAAAGATATGAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATACAACCAGAGGAAGTATATCAAACAGACAGAAAGATATGAAGA  773

seq1  ATTATCTTTTATTTCTGCCGCATACATATTTTTATTTGTACACATCTGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTTTATTTCTGCCGCATACATATTTTTATTTGTACACATCTGTC  823

seq1  TTTTCTCAGAATCATAATGCCTTCTGTTGAAATGGGAGCTAACACCCCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAGAATCATAATGCCTTCTGTTGAAATGGGAGCTAACACCCCAG  873

seq1  TTTGTGTCTTGTCTTTTTGTTGTAACACAAGATTGTATATACTGACTTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTCTTGTCTTTTTGTTGTAACACAAGATTGTATATACTGACTTCT  923

seq1  TGTTCCCCGTCTGTATTTGTCTGAGGCAGGGTCTCACTCTATAGATTGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCCGTCTGTATTTGTCTGAGGCAGGGTCTCACTCTATAGATTGTG  973

seq1  TTGGCCTGGAATTTACTATGTATCTCAAGGTGGCCTTGAATTCTTGGACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTGGAATTTACTATGTATCTCAAGGTGGCCTTGAATTCTTGGACA  1023

seq1  CTATTTCTGCTTTGGCCTCTTGGATTCTGGGATTATAGGCATGAGCTACC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTGCTTTGGCCTCTTGGATTCTGGGATTATAGGCATGAGCTACC  1073

seq1  AGGTCAAGCTGTAATTTCAAACATTTTTGAAAACTGAGTTCTATTCCATC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAGCTGTAATTTCAAACATTTTTGAAAACTGAGTTCTATTCCATC  1123

seq1  AAAGAATTC  1157
      |||||||||
seq2  AAAGAATTC  1132