BAC Information

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BAC

Clone NameB6Ng01-106C02
Chromosome14 (Build37)
Map Location 71,625,158 - 71,626,158
singlet/doubletsinglet
Overlap genenone
Upstream genePpp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2
Downstream geneLOC100043132, LOC100043136, LOC668477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106C02.bB6Ng01-106C02.g
ACCDH913956DH913957
length1,0021,139
definitionDH913956|Mus musculus domesticus DNA, BAC clone: B6Ng01-106C02, 5' end.DH913957|Mus musculus domesticus DNA, BAC clone: B6Ng01-106C02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtttcttttctaaccttccctcttgcgagaagttgacagtttc
agtccagtttctccttaagcacctggtcccaactacatgcatatgagtaa
taccactaccaatgaaggtccaaggctcaactcctctaaggtggcaaata
cttgatggctttgtacagagatccacagagggatcctgagggaggctgcc
catttacagagtgtgagctgtgacaatcctactaaacctttgacattgtc
ccaccatggtatgttagagtcaatctctgttgtaacctgcttgatacagg
tgcaccacatcccactctactgtaatggccaatctttcctaattacattt
ctactatggtggtttgaatatgcttgacccatagggaatggcacttttag
gagttgtggccttgttggaataggtgtggtgtttttggaggaagtgtgtc
actgtgtaaacaggctttgaggtctctttctacattcaggctctgcccag
tacagaggagaccctccttctagcagcctgcagaggagtctccttctgga
tatctttggatcaagacatagaactctcttttggctcctccagcaacatg
tctgactacaggctaccatgattcccattgtgatgataatggaccgaacc
tctgaaactgtaagccagccccaattaaatgttggctttgtacagagatc
cacagagggaccctgagggaggctgcccatttacagagtgtggactgtga
caatcctactaaacctttgactcttcataagagtttccttggtcatctgt
ttgcagaaatagacacccttgactaagacatctaccaatgtttataatct
ttttcttctcatttctagattctcagtctcttagtagcagaggatatgtt
ttcttctaattctgtatctttagaaccatgtatggtatttgtaaaagcag
aaacttcatgaatgtagaaagaaaaagggggtatgagtagttgtttgaga
ga
gaattcccctctgaggaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcaaaggccagcttgctgcttggcctcttggcagtcgg
cttcaaggtcatagtgcacctccaccctatgctgagcccccgccctgcgt
agtgcatcagccctgcgcagagaggcaatggacagagaggcaatgcacag
actcgttcattccaaaggaggaacaaaggaaaatacaacaggcatttccg
gtctttgaaggagccgagggtgggcgtgtccacgctccggtagaatactt
acaaattaaggaaattgccgagtcggttcgtaaatacggaaccaatgcta
attttaccttggtgcagttagacaggctcgctggcatggcactaactcct
gccgactggcaaacggttgtaaaagccgctctccctagtatgggcaaata
tatggaatggagagcgctttggcacgaagctgcacaagcgcaggcccgag
caaacgcagctgctttgactccagaacagagagattggacttttgacttg
ttaacgggtcagggagcttattctgctgatcagacaaactaccattgggg
gagcttatgcccagatttcttccacggctattagggcctggaaggcgctc
tctcgagcaggtgaaaccactgggcagttaaacaaaagataatccagggt
cctcaggaatccttctcagatttttgtggccagaatgacagaggcagcag
agcgtattttttggagagtcagagcaagctgcgcctctgataaaacagct
aatctatgaggcaagccacaaaggagtgtcgagcggtcataacctctcaa
gaaagaacaaaggcttaacaagactggctcaaggtttgtcgagaatcttg
ggggacctctccacaatgcatggctttactggccgccattctccaatctc
aaaccgctccattgagcaaaaatggatcagaagaacatgttttatttgcg
gaaagcttggcattttaagaaaaaaatgctagcctccagaaaaacggaag
gaacctctcactctttgtctaaggtggcacaggtatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_71625158_71626158
seq2: B6Ng01-106C02.b_46_1047 (reverse)

seq1  TCTCTCATACACTTACTCATTCCCCCTTTTTCCTTCTACATTCCATG-AG  49
      ||||||| |||  ||||||| ||||||||||| ||||||||| |||| ||
seq2  TCTCTCAAACAACTACTCATACCCCCTTTTTCTTTCTACATT-CATGAAG  49

seq1  TTTCTGCTTTTTCCAATAGCCATACATGGTTCTGAAGATACAGAATTTAG  99
      ||||||||||| | |||| |||||||||||||| ||||||||||| ||||
seq2  TTTCTGCTTTTACAAATA-CCATACATGGTTCTAAAGATACAGAA-TTAG  97

seq1  AAG-AAACATATCCTCTGCTACTAAGAGACTGAGAATCTAGAAATGAGAG  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGAAAACATATCCTCTGCTACTAAGAGACTGAGAATCTAGAAATGAGAA  147

seq1  GAAAAGGA-TATAAACATTGGTAGATGTCTTAGTC-AGGGTGTCTATTTC  196
      ||||| || |||||||||||||||||||||||||| ||||||||||||||
seq2  GAAAAAGATTATAAACATTGGTAGATGTCTTAGTCAAGGGTGTCTATTTC  197

seq1  TGCAAACAGATGACCAAGGAAACTCTTATGAAGAGTCAAAGGTTTAGTAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACAGATGACCAAGGAAACTCTTATGAAGAGTCAAAGGTTTAGTAG  247

seq1  GATTGTCACAGTCCACACTCTGTAAATGGGCAGCCTCCCTCAGGGTCCCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCACAGTCCACACTCTGTAAATGGGCAGCCTCCCTCAGGGTCCCT  297

seq1  CTGTGGATCTCTGTACAAAGCCAACATTTAATTGGGGCTGGCTTACAGTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGATCTCTGTACAAAGCCAACATTTAATTGGGGCTGGCTTACAGTT  347

seq1  TCAGAGGTTCGGTCCATTATCATCACAATGGGAATCATGGTAGCCTGTAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTTCGGTCCATTATCATCACAATGGGAATCATGGTAGCCTGTAG  397

seq1  TCAGACATGTTGCTGGAGGAGCCAAAAGAGAGTTCTATGTCTTGATCCAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACATGTTGCTGGAGGAGCCAAAAGAGAGTTCTATGTCTTGATCCAA  447

seq1  AGATATCCAGAAGGAGACTCCTCTGCAGGCTGCTAGAAGGAGGGTCTCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCCAGAAGGAGACTCCTCTGCAGGCTGCTAGAAGGAGGGTCTCCT  497

seq1  CTGTACTGGGCAGAGCCTGAATGTAGAAAGAGACCTCAAAGCCTGTTTAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGGCAGAGCCTGAATGTAGAAAGAGACCTCAAAGCCTGTTTAC  547

seq1  ACAGTGACACACTTCCTCCAAAAACACCACACCTATTCCAACAAGGCCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGACACACTTCCTCCAAAAACACCACACCTATTCCAACAAGGCCAC  597

seq1  AACTCCTAAAAGTGCCATTCCCTATGGGTCAAGCATATTCAAACCACCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTAAAAGTGCCATTCCCTATGGGTCAAGCATATTCAAACCACCAT  647

seq1  AGTAGAAATGTAATTAGGAAAGATTGGCCATTACAGTAGAGTGGGATGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAATGTAATTAGGAAAGATTGGCCATTACAGTAGAGTGGGATGTG  697

seq1  GTGCACCTGTATCAAGCAGGTTACAACAGAGATTGACTCTAACATACCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCTGTATCAAGCAGGTTACAACAGAGATTGACTCTAACATACCAT  747

seq1  GGTGGGACAATGTCAAAGGTTTAGTAGGATTGTCACAGCTCACACTCTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGACAATGTCAAAGGTTTAGTAGGATTGTCACAGCTCACACTCTGT  797

seq1  AAATGGGCAGCCTCCCTCAGGATCCCTCTGTGGATCTCTGTACAAAGCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGCAGCCTCCCTCAGGATCCCTCTGTGGATCTCTGTACAAAGCCA  847

seq1  TCAAGTATTTGCCACCTTAGAGGAGTTGAGCCTTGGACCTTCATTGGTAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTATTTGCCACCTTAGAGGAGTTGAGCCTTGGACCTTCATTGGTAG  897

seq1  TGGTATTACTCATATGCATGTAGTTGGGACCAGGTGCTTAAGGAGAAACT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTACTCATATGCATGTAGTTGGGACCAGGTGCTTAAGGAGAAACT  947

seq1  GGACTGAAACTGTCAACTTCTCGCAAGAGGGAAGGTTAGAAAAGAAACAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAAACTGTCAACTTCTCGCAAGAGGGAAGGTTAGAAAAGAAACAG  997

seq1  AATTC  1001
      |||||
seq2  AATTC  1002