BAC Information

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BAC

Clone NameB6Ng01-106I04
Chromosome14 (Build37)
Map Location 23,186,001 - 23,186,859
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068, Kcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106I04.g
ACCDH914229
length858
definitionDH914229|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggatagccagagttgcacaaagaaatcctgtcttaaaaaaca
gaacaaaacaaaagtaagtttttaggcctgagggagatagttgtacaagc
cacagatggacataataaaatcttgctgaggaagaggaagaaatgatttc
ctgtgcaactctttgtatgtgtctatacccgagatcacgcacacgtgtgt
gtgtgtgtgtgtgtgcgcgcgtgtgcgtgtgcgcatatggagaccagagg
acaacttcagatgtcattctccagtggccatctatctgaatcttagggtg
gggtctctctcactgtcctagatctcaccaagaaggttagactggctggt
caacaagtccaagggcccacctgtttgtccccccccccttggaattaaaa
ctgtgccaccacatctgtctttggtacagccttttcatttgaactatcca
tgtgaaaaagtttcaaacgttgctcagaaaatatccctttgtgctccatg
ggtcacattcagcacatacttacagagtggtctcagttagaagaaggcat
gtaagaggctttgaggggaagggttgtttgagtcagttccctgtggggtt
attagaagccagcccttggtggtcatcttgtgccatcatctgatatcaca
ggcaataaggcccaataactgccatacacgtgtactgtaaatgtttagac
tcaaaatgacagtggtgtgtgtgtgtgtggtttagcagcctctcagatga
ggaaattgaactccttgtgagtcttctatgacttcttgagggacttgatc
tttctctattacagaaatacaatgtatatcttgaaagagggctgggggca
atactact
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23186001_23186859
seq2: B6Ng01-106I04.g_69_926

seq1  GAATTCCAGGATAGCCAGAGTTGCACAAAGAAATCCTGTCTTAAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAGCCAGAGTTGCACAAAGAAATCCTGTCTTAAAAAACA  50

seq1  GAACAAAACAAAAGTAAGTTTTTAGGCCTGAGGGAGATAGTTGTACAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAACAAAAGTAAGTTTTTAGGCCTGAGGGAGATAGTTGTACAAGC  100

seq1  CACAGATGGACATAATAAAATCTTGCTGAGGAAGAGGAAGAAATGATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATGGACATAATAAAATCTTGCTGAGGAAGAGGAAGAAATGATTTC  150

seq1  CTGTGCAACTCTTTGTATGTGTCTATACCCGAGATCACGCACACGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAACTCTTTGTATGTGTCTATACCCGAGATCACGCACACGTGTGT  200

seq1  GTGTGTGTGTGTGTGCGCGCGTGTGCGTGTGCGCATATGGAGACCAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGCGCGCGTGTGCGTGTGCGCATATGGAGACCAGAGG  250

seq1  ACAACTTCAGATGTCATTCTCCAGTGGCCATCTATCTGAATCTTAGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTCAGATGTCATTCTCCAGTGGCCATCTATCTGAATCTTAGGGTG  300

seq1  GGGTCTCTCTCACTGTCCTAGATCTCACCAAGAAGGTTAGACTGGCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCTCTCACTGTCCTAGATCTCACCAAGAAGGTTAGACTGGCTGGT  350

seq1  CAACAAGTCCAAGGGCCCACCTGTTTGTCCCCCCCCCCTTGGAATTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGTCCAAGGGCCCACCTGTTTGTCCCCCCCCCCTTGGAATTAAAA  400

seq1  CTGTGCCACCACATCTGTCTTTGGTACAGCCTTTTCATTTGAACTATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCACCACATCTGTCTTTGGTACAGCCTTTTCATTTGAACTATCCA  450

seq1  TGTGAAAAAGTTTCAAACGTTGCTCAGAAAATATCCCTTTGTGCTCCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAAAGTTTCAAACGTTGCTCAGAAAATATCCCTTTGTGCTCCATG  500

seq1  GGTCACATTCAGCACATACTTACAGAGTGGTCTCAGTTAGAAGAAGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACATTCAGCACATACTTACAGAGTGGTCTCAGTTAGAAGAAGGCAT  550

seq1  GTAAGAGGCTTTGAGGGGAAGGGTTG-TTGAGTCAGTTCCCTGTGGGGTT  599
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTAAGAGGCTTTGAGGGGAAGGGTTGTTTGAGTCAGTTCCCTGTGGGGTT  600

seq1  ATTAGAAGCCAGCCCTTGGTGGTCATCTTGTGCCATCATCTGATATCACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAGCCAGCCCTTGGTGGTCATCTTGTGCCATCATCTGATATCACA  650

seq1  GGCAATAAGGCCCAATAACTGCCATACACGTGTACTGTAAATGTTTAGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATAAGGCCCAATAACTGCCATACACGTGTACTGTAAATGTTTAGAC  700

seq1  TCAAAATGACAGTGGTGTGTGTGTGTGTGGTTTAGCAGCCATCTCAGATG  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCAAAATGACAGTGGTGTGTGTGTGTGTGGTTTAGCAGCC-TCTCAGATG  749

seq1  AGGAAATTGAACACCATGTGAGTCTCAGATGACTTCTAGAGGGACTAGAT  799
      |||||||||||| || |||||||||   ||||||||| |||||||| |||
seq2  AGGAAATTGAACTCCTTGTGAGTCTTCTATGACTTCTTGAGGGACTTGAT  799

seq1  CTTTCTCTAATCACAGAATTACAATGTATATCTTGAAAGAGGGCTGGGGC  849
      |||||||| || |||||| |||||||||||||||||||||||||||||| 
seq2  CTTTCTCT-ATTACAGAAATACAATGTATATCTTGAAAGAGGGCTGGGGG  848

seq1  CGATACTACT  859
      | ||||||||
seq2  CAATACTACT  858