BAC Information

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BAC

Clone NameB6Ng01-107E22
Chromosome2 (Build37)14 (Build37)
Map Location 142,776,604 - 142,777,11123,925,672 - 23,926,782
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107E22.bB6Ng01-107E22.g
ACCDH914809DH914810
length6371,096
definitionDH914809|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E22, 5' end.DH914810|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,604 - 142,777,111)(23,925,672 - 23,926,782)
sequence
gaattcaacatgccaggaagtctcgcaagccaaatatctccaacaactag
agagatggctcagtggagaaaatacttgccaggcaagtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtctttcccaatctgttggtggac
tttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctccatcttccagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggctttccccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataagtatggatcgattcg
cattcttctacacgataacaaccagttgtgccagcaccacttgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagttttttatcacaatt
gctctgtagtaaagctttaggtcaggcatggtgattc
gaattccataactaaaaggagaatgctttcttttgtactttgcaacacag
gtcttttctgaatgtaaataaactcagccttcagaataaaattatcttaa
gtgggtggtagaaagatggcctagcgattaagagcattggctgaccttgc
agagaacctggctttgattctcaggacagacagggaagctcacaactatc
tgggactccagttcaaggagattcactgccttcttctggcctctgtggtc
accaggaatgctcacaaggcacagaaatacatgcaaacaaaagcacatac
acacagaaatacacatacaatcttcttttaaaataacattaattgataat
aattcaggtgaccagaataaatggaaaaagaaaaagcttctaagatattc
tggctggaatttgtctttctttactgttggaatcaattccccagtggggc
ttggggtttcacaaaggaacagacaagaaaattcagctaaaaatcattga
gtttctatcatgaaacttagtctcagatcagtaagtttatccccgaggct
caggttcccctcagtaagtagactcacacccatgcctcagtttcccctcc
cataaagcctagtattgcccactcacatggtaagcttcccccgtgtccat
attgcttttccttccccacttttctgattagagggagattccgattgaaa
ggggaaaaaaatgaaaggaaaagcagaaaaattagcatttgctcagctgc
acatttcagttattaatattgcaatttgaagtaatggaattcacagaacg
caaaagtttaaggtttgcctggtggggtgaactcagctgcatggtatacg
gcttgaatttcaaggtgaggttcattatgcagaatcagtatgggcaagct
acaatgccataaacccttcactggtgtcttccttggtttaatgtgcatta
ctgtgggtttggagttttatatgctgtataatatagaatgcatatttgtg
agcatgtgcatcatgaaacgggagaaatttttaatggtttaaatctctga
ctgcttgttggctctctgttggacttggtagaaagcagtggggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776604_142777111
seq2: B6Ng01-107E22.b_163_671 (reverse)

seq1  GAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGAT-AAA  49
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAA  50

seq1  AACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAA  100

seq1  TTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGAC  150

seq1  AAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTG  199
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAGTG  200

seq1  GTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCAT  249
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTGCTGGCACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCAT  250

seq1  ACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCAC  300

seq1  ATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCT  349
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGGAAAGCCT  350

seq1  TGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTT  399
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTT  400

seq1  GTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGT  449
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGAAGATGGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGT  450

seq1  TTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGA  499
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGTCCACCAACAGA  500

seq1  TTGGGAAAG  508
      |||||||||
seq2  TTGGGAAAG  509

seq1: chr14_23925672_23926782
seq2: B6Ng01-107E22.g_67_1162

seq1  GAATTCCATAACTAAAAGGAGAATGCTTTCTTTTGTACTTTGCAACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAACTAAAAGGAGAATGCTTTCTTTTGTACTTTGCAACACAG  50

seq1  GTCTTTTCTGAATGTAAATAAACTCAGCCTTCAGAATAAAATTATCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTCTGAATGTAAATAAACTCAGCCTTCAGAATAAAATTATCTTAA  100

seq1  GTGGGTGGTAGAAAGATGGCCTAGCGATTAAGAGCATTGGCTGACCTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGTAGAAAGATGGCCTAGCGATTAAGAGCATTGGCTGACCTTGC  150

seq1  AGAGAACCTGGCTTTGATTCTCAGGACAGACAGGGAAGCTCACAACTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCTGGCTTTGATTCTCAGGACAGACAGGGAAGCTCACAACTATC  200

seq1  TGGGACTCCAGTTCAAGGAGATTCACTGCCTTCTTCTGGCCTCTGTGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCCAGTTCAAGGAGATTCACTGCCTTCTTCTGGCCTCTGTGGTC  250

seq1  ACCAGGAATGCTCACAAGGCACAGAAATACATGCAAACAAAAGCACATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAATGCTCACAAGGCACAGAAATACATGCAAACAAAAGCACATAC  300

seq1  ACACAGAAATACACATACAATCTTCTTTTAAAATAACATTAATTGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAATACACATACAATCTTCTTTTAAAATAACATTAATTGATAAT  350

seq1  AATTCAGGTGACCAGAATAAATGGAAAAAGAAAAAGCTTCTAAGATATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGTGACCAGAATAAATGGAAAAAGAAAAAGCTTCTAAGATATTC  400

seq1  TGGCTGGAATTTGTCTTTCTTTACTGTTGGAATCAATTCCCCAGTGGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGAATTTGTCTTTCTTTACTGTTGGAATCAATTCCCCAGTGGGGC  450

seq1  TTGGGGTTTCACAAAGGAACAGACAAGAAAATTCAGCTAAAAATCATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTTCACAAAGGAACAGACAAGAAAATTCAGCTAAAAATCATTGA  500

seq1  GTTTCTATCATGAAACTTAGTCTCAGATCAGTAAGTTTATCCCCGAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATCATGAAACTTAGTCTCAGATCAGTAAGTTTATCCCCGAGGCT  550

seq1  CAGGTTCCCCTCAGTAAGTAGACTCACACCCATGCCTCAGTTTCCCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCCCCTCAGTAAGTAGACTCACACCCATGCCTCAGTTTCCCCTCC  600

seq1  CATAAAGCCTAGTATTGCCCACTCACATGGTAAGCTTCCCCCGTGTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGCCTAGTATTGCCCACTCACATGGTAAGCTTCCCCCGTGTCCAT  650

seq1  ATTGCTTTTCCTTCCCCACTTTTCTGATTAGAGGGAGATTCCGATTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTTCCTTCCCCACTTTTCTGATTAGAGGGAGATTCCGATTGAAA  700

seq1  GGGGAAAAAAATGAAAGGAAAAGCAG-AAAATTAGCATTTGCTCAGCTGC  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGGGAAAAAAATGAAAGGAAAAGCAGAAAAATTAGCATTTGCTCAGCTGC  750

seq1  ACATTTCAGTTATTAATATTGCAATTTGAAGTAATGGAATTCACAGAACG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAGTTATTAATATTGCAATTTGAAGTAATGGAATTCACAGAACG  800

seq1  CAAAAGGTTTAAGGTTTGCCTGGTGGGGTGAACTCAGCTGCATGGTATAC  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAA-GTTTAAGGTTTGCCTGGTGGGGTGAACTCAGCTGCATGGTATAC  849

seq1  GGCTTGAATTTCAAGGTGAGGTTCATTATGCAGAATCAGTATGGGCAAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGAATTTCAAGGTGAGGTTCATTATGCAGAATCAGTATGGGCAAGC  899

seq1  TAACAATGCCATAAACCCTTCACTGGGTGTCTTCCTTGGTTTTAATGTTG  949
      | |||||||||||||||||||||| |||||||||||||| ||||||| ||
seq2  T-ACAATGCCATAAACCCTTCACT-GGTGTCTTCCTTGG-TTTAATG-TG  945

seq1  CATTACTGTGGGTTTTGGAGTTTTAATATGCTGTATAAATATAGAATGCA  999
      |||||||||||| ||||||||||| ||||||||||| |||||||||||||
seq2  CATTACTGTGGG-TTTGGAGTTTT-ATATGCTGTAT-AATATAGAATGCA  992

seq1  TATTTGTGAGCATGTGCATCATGAAACGGGAGAAATTTTTTTAATGTTTT  1049
      |||||||||||||||||||||||||||||||||||  ||||||||| |||
seq2  TATTTGTGAGCATGTGCATCATGAAACGGGAGAAA--TTTTTAATGGTTT  1040

seq1  AAATCTCTGGCCCTGCTCTGTTTGCTCTCTGGTTGACTTTGGTAGAAAGC  1099
      |||||||||   ||||| |||| |||||||| | ||| ||||||||||||
seq2  AAATCTCTG--ACTGCT-TGTTGGCTCTCTGTTGGAC-TTGGTAGAAAGC  1086

seq1  AGGTGGGAGAAA  1111
      | ||||| ||||
seq2  A-GTGGG-GAAA  1096