BAC Information

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BAC

Clone NameB6Ng01-107H01
Chromosome14 (Build37)
Map Location 10,390,708 - 10,391,865
singlet/doubletsinglet
Overlap geneFhit
Upstream gene4930452B06Rik, LOC100041948
Downstream geneLOC100042415
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107H01.bB6Ng01-107H01.g
ACCDH914909DH914910
length1,1471,020
definitionDH914909|Mus musculus domesticus DNA, BAC clone: B6Ng01-107H01, 5' end.DH914910|Mus musculus domesticus DNA, BAC clone: B6Ng01-107H01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatatgaagaacttgtcatagcttctgaccccagcacaatcaat
tagagacctccccttcacagtgatgcattaatatgtagctagaagctttc
gactaggattttgacgacttcaggcttcaagaagtttccaactcatcatt
aggagaaaccagagacagcagaatcctccacagtgataggagccaagata
ccaagaagggaggtatagtactgttagaaaagtgctgtgtcacttttcat
caagaggaaaatttgacactgggacatgttgcttgtcataaaaggattcc
tagctatatcaaaagaataaattgctatttccccagtggtaattttaaat
gggaggcttgataatacaatcacaaactatttgctaagaactcatttcaa
gccaaacacagtagctgtccttccccattagagctgacggtagatctcaa
ggaggagggtgtccactagaacatgaaagtacatggaccctgggcaaagc
actagtacattgtccaccacaactctgatctaactgacttcagacattga
tcataccataaacccattgacattttatcagtcatgtatatctacctcct
tctgctcccctaaaacccccatcacatgccctcccagagccactttatga
tctagaattagccaatgaattttaatgggtatttaatttttttcaaagag
tgggagtcagtgctttagatgatagatcatgtaataattaagcattaaaa
gagctcaacagaagattctttttttgccagcagatatctttaggtcaaga
aggtctataaaaaccggcagatcatttgcactcctttaagacaggcaaaa
atcgactttgaatgcaattagatgctcttaccactttccctaaagctccg
catcttgctccaatgaggtaaaatttgagctgctggcatttagagctgca
attgctggtgtgatattgccttaaagatatcaaagcacatgctggtatcc
aaatcatctttaatgggaaacagtgaaactgagtcacagctccagaaagg
ggactttctagagaggtcatcttgtctctgcagagctctgaggagctagc
aagctattctcctgaattacctcatctcttctggcctctgagatttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagtgaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggagccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccctatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
tagtatacccaagatataagatacaatttcctaaaacacatgaaactcaa
gaaaaaatgaagactgaagtgtggacactatgcccctccttagatgtggg
gaacaaaacacccttggaaggagttacagagacaaagtttggagctgaga
tgaaaggatggaccatgtagagactgccatatccaggggatccaccccat
taatcagcatccaaacgctgacatcattgcacacactagcaagattttat
caaaaggacccagatgtagctgtctcttgtgagactattgccggggccta
gcaaacatcagaagtgggatgctcacagtcatgctatgcatgggatccac
tgggcttcctaatggaggactagagaaagtaccaagtagctaaagggatc
tgcatcctatagggtggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_10390708_10391865
seq2: B6Ng01-107H01.b_46_1192 (reverse)

seq1  AAAATCTTCAGAAGCCAGGAAGAGATGAGGTAATTCAGGGAGAATAGCTT  50
      |||||| ||||| |||| ||||||||||||||||||| ||||||||||||
seq2  AAAATC-TCAGAGGCCA-GAAGAGATGAGGTAATTCA-GGAGAATAGCTT  47

seq1  GGCTAGCTCCTCAGAGCTCTGCAGAGACAAGGTTGGACCTCTCTAGAAAG  100
       |||||||||||||||||||||||||||||| |  |||||||||||||||
seq2  -GCTAGCTCCTCAGAGCTCTGCAGAGACAAGAT--GACCTCTCTAGAAAG  94

seq1  TTCCCCTTTCTGGGAGCTGTGACTCAGTTTCACTGTTTCCAATTAAAAGA  150
       |||||||||| |||||||||||||||||||||||||||| ||| |||||
seq2  -TCCCCTTTCT-GGAGCTGTGACTCAGTTTCACTGTTTCCCATT-AAAGA  141

seq1  TGATTTGGATACCAGCATGTGCTTTGATATCTTTAAGGCAATATCACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGGATACCAGCATGTGCTTTGATATCTTTAAGGCAATATCACACC  191

seq1  AGCAATTTGCAGCTCTAAATGCCAGCAGCTCAAAATTTTACCTCATTGGA  250
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGCAA-TTGCAGCTCTAAATGCCAGCAGCTC-AAATTTTACCTCATTGGA  239

seq1  GCAAGATGCGGAGCTTTAGGGAAAGTGGTAAGAGCATCTAATTGCATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATGCGGAGCTTTAGGGAAAGTGGTAAGAGCATCTAATTGCATTCA  289

seq1  AAGTCGATTTTTGCCTGTCTTAAAGGAGTGCAAATGATCTGCCGGTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGATTTTTGCCTGTCTTAAAGGAGTGCAAATGATCTGCCGGTTTTT  339

seq1  ATAGACCTTCTTGACCTAAAGATATCTGCTGGCAAAAAAAGAATCTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCTTCTTGACCTAAAGATATCTGCTGGCAAAAAAAGAATCTTCTG  389

seq1  TTGAGCTCTTTTAATGCTTAATTATTACATGATCTATCATCTAAAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCTTTTAATGCTTAATTATTACATGATCTATCATCTAAAGCACT  439

seq1  GACTCCCACTCTTTGAAAAAAATTAAATACCCATTAAAATTCATTGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCACTCTTTGAAAAAAATTAAATACCCATTAAAATTCATTGGCTA  489

seq1  ATTCTAGATCATAAAGTGGCTCTGGGAGGGCATGTGATGGGGGTTTTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGATCATAAAGTGGCTCTGGGAGGGCATGTGATGGGGGTTTTAGG  539

seq1  GGAGCAGAAGGAGGTAGATATACATGACTGATAAAATGTCAATGGGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGAAGGAGGTAGATATACATGACTGATAAAATGTCAATGGGTTTA  589

seq1  TGGTATGATCAATGTCTGAAGTCAGTTAGATCAGAGTTGTGGTGGACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGATCAATGTCTGAAGTCAGTTAGATCAGAGTTGTGGTGGACAAT  639

seq1  GTACTAGTGCTTTGCCCAGGGTCCATGTACTTTCATGTTCTAGTGGACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGTGCTTTGCCCAGGGTCCATGTACTTTCATGTTCTAGTGGACAC  689

seq1  CCTCCTCCTTGAGATCTACCGTCAGCTCTAATGGGGAAGGACAGCTACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTTGAGATCTACCGTCAGCTCTAATGGGGAAGGACAGCTACTG  739

seq1  TGTTTGGCTTGAAATGAGTTCTTAGCAAATAGTTTGTGATTGTATTATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGCTTGAAATGAGTTCTTAGCAAATAGTTTGTGATTGTATTATCA  789

seq1  AGCCTCCCATTTAAAATTACCACTGGGGAAATAGCAATTTATTCTTTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCCATTTAAAATTACCACTGGGGAAATAGCAATTTATTCTTTTGA  839

seq1  TATAGCTAGGAATCCTTTTATGACAAGCAACATGTCCCAGTGTCAAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTAGGAATCCTTTTATGACAAGCAACATGTCCCAGTGTCAAATTT  889

seq1  TCCTCTTGATGAAAAGTGACACAGCACTTTTCTAACAGTACTATACCTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGATGAAAAGTGACACAGCACTTTTCTAACAGTACTATACCTCC  939

seq1  CTTCTTGGTATCTTGGCTCCTATCACTGTGGAGGATTCTGCTGTCTCTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGTATCTTGGCTCCTATCACTGTGGAGGATTCTGCTGTCTCTGG  989

seq1  TTTCTCCTAATGATGAGTTGGAAACTTCTTGAAGCCTGAAGTCGTCAAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTAATGATGAGTTGGAAACTTCTTGAAGCCTGAAGTCGTCAAAA  1039

seq1  TCCTAGTCGAAAGCTTCTAGCTACATATTAATGCATCACTGTGAAGGGGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTCGAAAGCTTCTAGCTACATATTAATGCATCACTGTGAAGGGGA  1089

seq1  GGTCTCTAATTGATTGTGCTGGGGTCAGAAGCTATGACAAGTTCTTCATA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTAATTGATTGTGCTGGGGTCAGAAGCTATGACAAGTTCTTCATA  1139

seq1  TGGAATTC  1158
      ||||||||
seq2  TGGAATTC  1147