BAC Information

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BAC

Clone NameB6Ng01-108C21
Chromosome14 (Build37)
Map Location 83,656,287 - 83,801,131
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108C21.bB6Ng01-108C21.g
ACCDH915433DH915434
length1,111145
definitionDH915433|Mus musculus domesticus DNA, BAC clone: B6Ng01-108C21, 5' end.DH915434|Mus musculus domesticus DNA, BAC clone: B6Ng01-108C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,656,287 - 83,657,400)(83,800,987 - 83,801,131)
sequence
gaattcaaataagaaggagaaaatcagctctataacaaatggtcctctga
ctttgacttatacagaagatgacatttgctctgacacaagcagatcacac
acacacacacacacacacacacacacacacacacacacacacacaaacac
aaacaaacacatacatacacatacatacacatacacacacatacaaacac
acataccacacacacacaacacaacacacacacacacacacacacacata
cacacgcacatacacatatatacacacacacacacaccacacacacacaa
acatacacacacacacacacacacacacacacacacacacaccacacaca
cacacataaatgaatgtaacataaccaagattggagctatgtaaaataca
gatttttgaagtgtcttagacagttaagtggtaagtacagcataaaggaa
gaagagtgaaaatttttatgtaaaagtaatataccttagatgaggtgaat
tattaacatcccacagaatatatgataattatataaagttctcaaaattt
ttactttagtatgtaattcattatttaagaaaaatctttactaaggatta
catattagtgaagggttaaggaagaatatcacaaagattaggtgttagat
tctaaagtagtggagtgtacccctctgtaaaattaattattcatattgaa
atattgaagtataagaatgtgtgaggaagtcttttttctttttctttttc
tttttttttttttggaataacaagctcacaggtcctatgatagattgaat
ggatagatagagacagaaagttgaggtgtaaagatgtgacagatatacgg
atatacattcattttctaaagagcttttctaagaagctgggagagtgaat
agagagaagaaggggaagcatctaaggaagttgatgagtctgacttctaa
ctgggacttcctagcagtagggaatattgaaacctgaatttggcttcctc
ctgtagccaggtaaggaacctctgtggaaagattaggcatatttctaagc
ctatctgacaatctttcacggaaacatgttctacttctgaaggagggaca
aaatggagcac
agaaactccactatacatggccaggcaacactactctttgccattctttc
ccattcacagttaacagaggaaaagaggaaaaaaaaaaaaaaagaggaaa
aagcaggaggaggaggaggaggaagaggaaggaggaagaaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83656287_83657400
seq2: B6Ng01-108C21.b_44_1154

seq1  GAATTCAAATAAGAAGGAGAAAATCAGCTCTATAACAAATGGTCCTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAAGAAGGAGAAAATCAGCTCTATAACAAATGGTCCTCTGA  50

seq1  CTTTGACTTATACAGAAGATGACATTTGCTCTGACACAAGCAGATCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACTTATACAGAAGATGACATTTGCTCTGACACAAGCAGATCACAC  100

seq1  ACACACACACACACACACACACACACACACACACACACACACACAAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACAAACAC  150

seq1  AAACAAACACATACATACACATACATACACATACACACACATACAAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACACATACATACACATACATACACATACACACACATACAAACAC  200

seq1  ACATACCACACACACACAACACAACACACACACACACACACACACACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCACACACACACAACACAACACACACACACACACACACACACATA  250

seq1  CACACGCACATACACATATATACACACACACACACACCACACACACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCACATACACATATATACACACACACACACACCACACACACACAA  300

seq1  ACATACACACACACACACACACACACACACACACACACACACCACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACACACACACACACACACACACACACACACACACACCACACACA  350

seq1  CACACATAAATGAATGTAACATAACCAAGATTGGAGCTATGTAAAATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATAAATGAATGTAACATAACCAAGATTGGAGCTATGTAAAATACA  400

seq1  GATTTTTGAAGTGTCTTAGACAGTTAAGTGGTAAGTACAGCATAAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGAAGTGTCTTAGACAGTTAAGTGGTAAGTACAGCATAAAGGAA  450

seq1  GAAGAGTGAAAATTTTTATGTAAAAGTAATATACCTTAGATGAGGTGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGAAAATTTTTATGTAAAAGTAATATACCTTAGATGAGGTGAAT  500

seq1  TATTAACATCCCACAGAATATATGATAATTATATAAAGTTCTCAAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACATCCCACAGAATATATGATAATTATATAAAGTTCTCAAAATTT  550

seq1  TTAC-TTAGTATGTAATTCATTATTTAAGAAAAATCTTTACTAAGGATTA  599
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTAGTATGTAATTCATTATTTAAGAAAAATCTTTACTAAGGATTA  600

seq1  CATATTAGTGAAGGGTTAAGGAAGAATATCACAAAGATTAGGTGTTAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAGTGAAGGGTTAAGGAAGAATATCACAAAGATTAGGTGTTAGAT  650

seq1  TCTAAAGTAGTGGAGTGTACCCCTCTGTAAAATTAATTATTCATATTGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGTAGTGGAGTGTACCCCTCTGTAAAATTAATTATTCATATTGAA  700

seq1  ATATTGAAGTACAAGAAGGTGTGAGGAAGTCTTTTTTTCTTTTTTCTTTT  749
      ||||||||||| ||||| |||||||||||||||||||   ||||||||||
seq2  ATATTGAAGTATAAGAATGTGTGAGGAAGTCTTTTTT--CTTTTTCTTTT  748

seq1  TTCTTTTTTTTTTTTTTGGAATAACAAGCTCACAGGTCCTATGATAGATT  799
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  T--CTTTTTTTTTTTTTGGAATAACAAGCTCACAGGTCCTATGATAGATT  796

seq1  GAATGGATAGATAGAGACAGAAAGTTGAGGTGTAAAAGATGTGACAGATA  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAATGGATAGATAGAGACAGAAAGTTGAGGTGT-AAAGATGTGACAGATA  845

seq1  TACGGATATACATTCA-TTTCTAAAGAGCTTTTCTAAGGAAGCTGGGAGA  898
      |||||||||||||||| |||||||||||||||||||| ||||||||||||
seq2  TACGGATATACATTCATTTTCTAAAGAGCTTTTCTAA-GAAGCTGGGAGA  894

seq1  GTGAATAGAGAGAAGAAGGGGAAGCATCT-AGGAAGTTGATGAGTCTGAC  947
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTGAATAGAGAGAAGAAGGGGAAGCATCTAAGGAAGTTGATGAGTCTGAC  944

seq1  -TCTAACTGGAAC-TCCTAGCAGTAGGGAATA-TGAAACCTGAA-TTGGC  993
       ||||||||| || |||||||||||||||||| ||||||||||| |||||
seq2  TTCTAACTGGGACTTCCTAGCAGTAGGGAATATTGAAACCTGAATTTGGC  994

seq1  TTCCTCCTGTAGCCAGGTAGGAAACCCCTGTGGAAAGA-TAAGCACACTA  1042
      ||||||||||||||||||| | |||| ||||||||||| || ||| | | 
seq2  TTCCTCCTGTAGCCAGGTAAGGAACCTCTGTGGAAAGATTAGGCATA-TT  1043

seq1  TCAAAGCCCA-CTGACAAAACCTTCTACCGAAAACATGTCCTACCTTCAA  1091
      || ||||| | |||||  || ||| |  || |||||||| ||| ||||  
seq2  TCTAAGCCTATCTGAC--AATCTT-TCACGGAAACATGTTCTA-CTTCTG  1089

seq1  GAGGAGGGACAAAAATGGAGCAC  1114
       ||||||||| ||||||||||||
seq2  AAGGAGGGAC-AAAATGGAGCAC  1111

seq1: chr14_83800987_83801131
seq2: B6Ng01-108C21.g_71_215 (reverse)

seq1  CCTCCTTCTTCCTCCTTCCTCTTCCTCCTCCTCCTCCTCCTGCTTTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCTTCCTCCTTCCTCTTCCTCCTCCTCCTCCTCCTGCTTTTTCC  50

seq1  TCTTTTTTTTTTTTTTTCCTCTTTTCCTCTGTTAACTGTGAATGGGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTTTTTCCTCTTTTCCTCTGTTAACTGTGAATGGGAAAG  100

seq1  AATGGCAAAGAGTAGTGTTGCCTGGCCATGTATAGTGGAGTTTCT  145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAAAGAGTAGTGTTGCCTGGCCATGTATAGTGGAGTTTCT  145