BAC Information

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BAC

Clone NameB6Ng01-108P21
Chromosome14 (Build37)
Map Location 39,057,981 - 39,059,056
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382871, LOC382872
Downstream geneNrg3, LOC100041521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108P21.bB6Ng01-108P21.g
ACCDH916029DH916030
length1,0671,004
definitionDH916029|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P21, 5' end.DH916030|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcaatatatcttttctttcttattgagtttgttgctaccttt
agtacaaggttgcctaaatgtaatgccacagggcattgctttgttattga
tcttaaaaaaaaatctttcagtatttcatcatgtgtctttaacatgggca
ctagagtttcacttcactaaccagcatcttgagaaattttacattgcagt
catgacaacttccttgtgtcaaagggaaaactccttagaccaattatgtg
atgcagtgtttgagcaacaaaaaagatagagtaaggaaaatcagaagaat
gatgtcacaatagggattcagctgatagtaggatgaggctgaagagtgta
ggctgagtgcaggagatgtaggtgtccagcatactgagtttctcatggag
atccagaaaggaaccacacactgaagacctccagaaaagtcaggtgtgct
atgtttatgtgttagctaaatttctggcaaattatttgtgcatgaagggg
aaagtcttattgtcttgtttggggttgtgctcctcatttgtgtattgatt
taagacaatgtctccagtgcctggtttagtgtctcatactgtaatccctg
aatctggcagggggagagaagaggattatcacacaatgaaggtcaaagtg
ggctccatgatgagcttcacctattaaagctacagtatgagaccctgcct
caaacacacaaacaagaaagccaagggtttcactctaggctaggttgatt
tgaactcctatcctctcttgggtcctgggattaaagatgggctctaccac
acccatagtttatagtaaattgctgcaacaataatagttaactgaagctg
ctcggttttgttttttattcggttttgtcatatcatattgaatataattt
attttcagttgtggattttcttcaacacttccctttaatctgccactcag
tgttacctgccatttgttacatactgcccattcctgtgttgtttggaaaa
tcatgtttcctttctgcatatttatctcttttatgtaatttgctataaaa
tagaacgtgtttgatct
gaattctcagctgaggaacagtgaatcattgagaaacatctaaagaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccacctcacaacaggcagaatggctaagataaaaaactcaggtgacatc
agatgctatcgaagatgtggagaaaggggaacactccttcattgttggtg
ggattgcaagctggtacaattattttggaaatcagttcctcagaaaatta
gacatagtattatctgaggacccagctataccactcctgggcatataccc
agaagatgctccaacatgtaataagggcacatgctccactatgttcatag
cagccacatttatgatagccagaagttggaaacaacccagatgtccctca
acataagaatgaatacagaaaatgtggcacatttacacaatggaatacca
ctctgctattaaaaacaatgactttgttaaattctctgacaaatggatga
aacttgaaaatatcatcctgagtgaggtaacacagtcaaaaaagaccaca
catggtatgtactcactgataaatggatattagctatcccatatacagtc
accaaacctggatgctattgtggacaccaagaagtgcttgctgacaggag
cctgatatagatgtcttctgagagtctctgccagagcctgacaaaaatag
aggtgggtgcttgcagccaaccgttagactgagttcgggttctctgagtt
ggaaaagggactgaaggagctgagggggtttgcaaccccatgagaggaac
aacagtgtcaaccggccagaacccccagagctcccagggactgggccacc
aaccaaagagtacacatgtagggacccatgactctgggcacatatgtgga
aaaggatggccttgttggcatcagtgggaggtgagctcttgagtttgagt
atgtcgatgtgccagtgtaggagaacgacagggcagagatggaagttggt
gtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_39057981_39059056
seq2: B6Ng01-108P21.b_48_1114

seq1  GAATTCCTTCAATATATCTTTTCTTTCTTATTGAGTTTGTTGCTACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAATATATCTTTTCTTTCTTATTGAGTTTGTTGCTACCTTT  50

seq1  AGTACAAGGTTGCCTAAATGTAATGCCACAGGGCATTGCTTTGTTATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAGGTTGCCTAAATGTAATGCCACAGGGCATTGCTTTGTTATTGA  100

seq1  TCTTAAAAAAAAATCTTTCAGTATTTCATCATGTGTCTTTAACATGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAAAAAAATCTTTCAGTATTTCATCATGTGTCTTTAACATGGGCA  150

seq1  CTAGAGTTTCACTTCACTAACCAGCATCTTGAGAAATTTTACATTGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTTTCACTTCACTAACCAGCATCTTGAGAAATTTTACATTGCAGT  200

seq1  CATGACAACTTCCTTGTGTCAAAGGGAAAACTCCTTAGACCAATTATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAACTTCCTTGTGTCAAAGGGAAAACTCCTTAGACCAATTATGTG  250

seq1  ATGCAGTGTTTGAGCAACAAAAAAGATAGAGTAAGGAAAATCAGAAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTGTTTGAGCAACAAAAAAGATAGAGTAAGGAAAATCAGAAGAAT  300

seq1  GATGTCACAATAGGGATTCAGCTGATAGTAGGATGAGGCTGAAGAGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCACAATAGGGATTCAGCTGATAGTAGGATGAGGCTGAAGAGTGTA  350

seq1  GGCTGAGTGCAGGAGATGTAGGTGTCCAGCATACTGAGTTTCTCATGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGTGCAGGAGATGTAGGTGTCCAGCATACTGAGTTTCTCATGGAG  400

seq1  ATCCAGAAAGGAACCACACACTGAAGACCTCCAGAAAAGTCAGGTGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAAAGGAACCACACACTGAAGACCTCCAGAAAAGTCAGGTGTGCT  450

seq1  ATGTTTATGTGTTAGCTAAATTTCTGGCAAATTATTTGTGCATGAAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATGTGTTAGCTAAATTTCTGGCAAATTATTTGTGCATGAAGGGG  500

seq1  AAAGTCTTATTGTCTTGTTTGGGGTTGTGCTCCTCATTTGTGTATTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTATTGTCTTGTTTGGGGTTGTGCTCCTCATTTGTGTATTGATT  550

seq1  TAAGACAATGTCTCCAGTGCCTGGTTTAGTGTCTCATACTGTAATCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAATGTCTCCAGTGCCTGGTTTAGTGTCTCATACTGTAATCCCTG  600

seq1  AATCTGGCAGGGGGAGAGAAGAGGATTATCACACAATGAAGGTCAAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGCAGGGGGAGAGAAGAGGATTATCACACAATGAAGGTCAAAGTG  650

seq1  GGCTCCATGATGAGCTTCACCTATTAAAGCTACAGTATGAGACCCTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCATGATGAGCTTCACCTATTAAAGCTACAGTATGAGACCCTGCCT  700

seq1  CAAACACACAAACAAGAAAGCCAAGGGTTTCACTCTAGGCTAGGTTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACACAAACAAGAAAGCCAAGGGTTTCACTCTAGGCTAGGTTGATT  750

seq1  TGAACTCCTATCCTCTCTTGGGTCCTGGGATTAAAGATGGGCTCTACCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCCTATCCTCTCTTGGGTCCTGGGATTAAAGATGGGCTCTACCAC  800

seq1  ACCCATAGTTTATAGTAAATTGCTGCAACAATAATAGTTAACTGAAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATAGTTTATAGTAAATTGCTGCAACAATAATAGTTAACTGAAGCTG  850

seq1  CTCGGTTTTGTTTTTTATTCGGTTTTGTCATATCATATTGAATATAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTTTTGTTTTTTATTCGGTTTTGTCATATCATATTGAATATAATTT  900

seq1  ATTTTCAGTTGTGGATTTTCTTCAACACTTCCTTTTAAATCTGCCAACTC  950
      |||||||||||||||||||||||||||||||| ||| |||||||| ||||
seq2  ATTTTCAGTTGTGGATTTTCTTCAACACTTCCCTTT-AATCTGCC-ACTC  948

seq1  AGTGTTACCTGCCATTTGTTACATAACTGCCCATTCCTGTGTTGTTTTGG  1000
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  AGTGTTACCTGCCATTTGTTACAT-ACTGCCCATTCCTGTGTTG-TTTGG  996

seq1  AAAATCATGTTTCCTTTCTTTGCATATTTTATCTCCTTTTATGTAATTTT  1050
      ||||||||||||||||||  |||||| ||||||| |||||||||||||| 
seq2  AAAATCATGTTTCCTTTC--TGCATA-TTTATCT-CTTTTATGTAATTT-  1041

seq1  GGTTATAAAATAG-ACGTGTTTAATCT  1076
       | |||||||||| |||||||| ||||
seq2  -GCTATAAAATAGAACGTGTTTGATCT  1067