BAC Information

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BAC

Clone NameB6Ng01-110F24
Chromosome14 (Build37)
Map Location 7,214,002 - 7,215,185
singlet/doubletsinglet
Overlap geneB930046C15Rik
Upstream geneLOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874
Downstream geneLOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110F24.bB6Ng01-110F24.g
ACCDH917013DH917014
length1,1761,163
definitionDH917013|Mus musculus domesticus DNA, BAC clone: B6Ng01-110F24, 5' end.DH917014|Mus musculus domesticus DNA, BAC clone: B6Ng01-110F24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagagagatgtgtgcaacttagaaaaccatgtggattccttatg
gggtgcaagcgtgccctgaacagaagtgaaggctatgattgtttctccag
tgcaggaacctcacagggttcctcttgtcaatccccctatctgcaaataa
ccagagacaccttacaacacaaaagcccatgggtacttcataggtcctag
aatctgcaagagtttgctaaagaaaaatattcccaaggccgagcaatgaa
ccttaaaagttatggtcatgaaaaaaacaaaacaacacccctgtacatct
atgactattgtagggcacacattcaaacacacataatatttgtgtttatg
caatacaagcatattgtattgcagtgacctgtttagtttcccggttaata
caaatataaaaatctcccaggacactttggaggcataaaaaacaaatctt
gaaggggaaagatacttagtgggcatagcatataggcaacacagtcaatg
atatgctttccactcataaaccggtctgggattcagggttcttgtcctat
tatccaatctggctcagcaagttcccaaggctgtgtagaatatgtttgtt
tcccagcctaggctcacatgttggtggtggaccagcctcttcttgttgct
cactgtttcagacttgtcccaaagtaaacagtttcttcaataggatctcc
cctttccatcacctgactgacttggtgtccaaaggtatgagcccagagta
atagaactgtctataactaggatccaaaggaaccattttctcccagaatg
tgattgtgccagggctattttgagtagaaaaggctgactatttgaagggc
aaagcttgcatggattatctccacactggagttcatggaaagggctgcac
ccacaggaccttttcattctcaagcagatggacaatcaggaatagcttct
ccttcagggctgctctggagacgactacaaactggaagtgccctagaact
ctatcgattattctctccttggttctgggaaacctgggtcaaaaaaaact
tcttttctacttctgaacttggcttctgacagacataccaatttatacta
caggactgtccggaaagtcttccattctcccacccccatgagctattaac
ttgaaaaatagatgtgaagaacagtc
gaattccacataaaaccagagaccatgaaacttatagaggagaaagtggg
gaaaagagtagaacatatgggcataggtggaaagttcctgaatagaccag
gaatggtttgtgctataagattgagaattgacaaatgggacctcatgaaa
ctgcaaagcttctgtaatgcaaaatgcactgtcaataagacaaaaaggcc
accaacagattgggaaaggatctttacttatcctaaatcagataggggac
taataaccaatatgtataaagaacacaagaaggtggactccagaaaatcc
aataaccccataaaaaagtgtggctcagagctaaacaaagaattgtcacc
tgaggaataccgaatggcagagaagcacttgaaaaatgttcagcatcctt
aatcatcagggaaatgcaaatcaaaacaaccctgagattccactacacac
cagtcagaatggctaagatcaaaaattctggtgacagcagattctggcaa
ggatgtggagaaaggggaacactcctccattgttggtgtgattgcaagct
tttacaaccactctcgaaatcagtctggcagttcctcagaaaattggaca
tagtacctggaggatcccagaatacctctcctgggcatatatccagaaga
tgttccaactggtaagaaggacacatgctctactatgttcatagcagcct
tatttataatcgccagaagctcaaaagaacccagatgcctctcaacagag
gaatggatacagaaaatgtggtacatttacccaatggagtactattcagc
tattaaaaaggatgaatttatgaaattcctaggcaaacagattgacctgg
aggacatcatcctgattgaggtaactcaatcacaaagattcacatgatat
gtacccactgatagtggatatagccagaatttggatacccagggtatgtg
atacaatatgcaacaaaagaaactcagatactagacaagtgtggaccttg
cacttttttatatgggacaaacaccatcaggagttcgagacaaatggagc
tgaaaagaagagttacattctagactgctagagtggagtgtctcacagtt
cgcattgatgatcagggctcatgggagaccttgagatgagattccaaggg
acctataggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7214002_7215185
seq2: B6Ng01-110F24.b_44_1219

seq1  GAATTCAAGAGAGATGTGTGCAACTTAGAAAACCATGTGGATTCCTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGAGATGTGTGCAACTTAGAAAACCATGTGGATTCCTTATG  50

seq1  GGGTGCGAGCGTGCCCTGAACAGAAGTGAAGGCTATGATTGTTTCTCCAG  100
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCAAGCGTGCCCTGAACAGAAGTGAAGGCTATGATTGTTTCTCCAG  100

seq1  TGCAGGAACCTCACAGGGTTCCTCTTGTCAATCCCCCTATCTGCAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAACCTCACAGGGTTCCTCTTGTCAATCCCCCTATCTGCAAATAA  150

seq1  CCAGAGACACCTTACAACACAAAAGCCCATGGGTACTTCATAGGTCCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGACACCTTACAACACAAAAGCCCATGGGTACTTCATAGGTCCTAG  200

seq1  AATCTGCAAGAGTTTGCTAAAGAAAAATATTCCCAAGGCCGAGCAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCAAGAGTTTGCTAAAGAAAAATATTCCCAAGGCCGAGCAATGAA  250

seq1  CCTTAAAAGTTATGGTCATGAAAAAAACAAAACAACACCCCTGTACATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAAGTTATGGTCATGAAAAAAACAAAACAACACCCCTGTACATCT  300

seq1  ATGACTATTGTAGGGCACACATTCAAACACACATAATATTTGTGTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATTGTAGGGCACACATTCAAACACACATAATATTTGTGTTTATG  350

seq1  CAATACAAGCATATTGTATTGCAGTGACCTGTTTAGTTTCCCGGTTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAAGCATATTGTATTGCAGTGACCTGTTTAGTTTCCCGGTTAATA  400

seq1  CAAATATAAAAATCTCCCAGGACACTTTGGAGGCATAAAAAACAAATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAAAAATCTCCCAGGACACTTTGGAGGCATAAAAAACAAATCTT  450

seq1  GAAGGGGAAAGATACTTAGTGGGCATAGCATATAGGCAACACAGTCAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAAAGATACTTAGTGGGCATAGCATATAGGCAACACAGTCAATG  500

seq1  ATATGCTTTCCACTCATAAACCGGTCTGGGATTCAGGGTTCTTGTCCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTTTCCACTCATAAACCGGTCTGGGATTCAGGGTTCTTGTCCTAT  550

seq1  TATCCAATCTGGCTCAGCAAGTTCCCAAGGCTGTGTAGAATATGTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAATCTGGCTCAGCAAGTTCCCAAGGCTGTGTAGAATATGTTTGTT  600

seq1  TCCCAGCCTAGGCTCACATGTTGGTGGTGGACCAGCCTCTTCTTGTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCTAGGCTCACATGTTGGTGGTGGACCAGCCTCTTCTTGTTGCT  650

seq1  CACTGTTTCAGACTTGTCCCAAAGTAAACAGTTTCTTCCAATAGGATCTC  700
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACTGTTTCAGACTTGTCCCAAAGTAAACAGTTTCTT-CAATAGGATCTC  699

seq1  CCCTTTCCATCACCTGACTGACTTGGTGTCCAAAGGTATGAGCCCAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCATCACCTGACTGACTTGGTGTCCAAAGGTATGAGCCCAGAGT  749

seq1  AATAGGAACTGTCTATAACTAGGATCCAAAGGAACCATTTTCTCCCCAGA  800
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  AATA-GAACTGTCTATAACTAGGATCCAAAGGAACCATTTTCT-CCCAGA  797

seq1  ATGTGATTGTGCCAGGGCTATTTTGAGTAAGAAAAGGCTGACTAATTGAA  850
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  ATGTGATTGTGCCAGGGCTATTTTGAGT-AGAAAAGGCTGACTATTTGAA  846

seq1  GGGCAAAAGCTTGCATGGATTATCT-CACACT-GAGTTCATGG-AAGGGC  897
      |||| |||||||||||||||||||| |||||| |||||||||| ||||||
seq2  GGGC-AAAGCTTGCATGGATTATCTCCACACTGGAGTTCATGGAAAGGGC  895

seq1  TGCACCACACAGGACCTTTTCATTCTTCAGCAGATGGAC-ATCAGG-ATA  945
      |||||| |||||||||||||||||||  ||||||||||| |||||| |||
seq2  TGCACC-CACAGGACCTTTTCATTCTCAAGCAGATGGACAATCAGGAATA  944

seq1  GCTTCTCCTTCAGGGCTGCTCTGAGGACGACTACAACACTG--AGTGACC  993
      |||||||||||||||||||||||  ||||||||||| ||||  |||| ||
seq2  GCTTCTCCTTCAGGGCTGCTCTGGAGACGACTACAA-ACTGGAAGTGCCC  993

seq1  TAG-ACTCTATCGA-TATCTCCTCCTT-GTTCTGGAAACACTGGGTCAAA  1040
      ||| |||||||||| |||   |||||| ||||||| ||  ||||||||||
seq2  TAGAACTCTATCGATTATTCTCTCCTTGGTTCTGGGAAACCTGGGTCAAA  1043

seq1  AAAGACTTCTTTTCTACTTTCTGAACATGGCTTCTGACAGACATACCCAA  1090
      ||| ||||||||||||| |||||||| ||||||||||||||||||||  |
seq2  AAAAACTTCTTTTCTAC-TTCTGAACTTGGCTTCTGACAGACATACC--A  1090

seq1  TTTTATACTACCAGAACTGT-CTGAAGGTCCTCATTTCTCCCAACCCCCA  1139
       ||||||||| ||| ||||| | ||| ||| ||  ||||||| |||||||
seq2  ATTTATACTA-CAGGACTGTCCGGAAAGTCTTCCATTCTCCC-ACCCCCA  1138

seq1  CTGAGGCTGATTTTAACTCTGAGAAAATGATGTTGAAGAACAGTC  1184
       |||    | | |||||| ||| |||  |||| ||||||||||||
seq2  -TGA----GCTATTAACT-TGAAAAATAGATG-TGAAGAACAGTC  1176