BAC Information

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BAC

Clone NameB6Ng01-112B11
Chromosome14 (Build37)
Map Location 52,995,354 - 52,995,800
singlet/doubletsinglet
Overlap genenone
Upstream geneEG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512
Downstream geneOlfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112B11.bB6Ng01-112B11.g
ACCDH918252DH918253
length4471,171
definitionDH918252|Mus musculus domesticus DNA, BAC clone: B6Ng01-112B11, 5' end.DH918253|Mus musculus domesticus DNA, BAC clone: B6Ng01-112B11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggacagccagggctatacagagaaaccctgtcttgagaaaaa
acaaaccaaaaaaacaacaaaaaaccaaagagtcagagtctgactcggtg
ttactatcctctttcaaatcacagatgtaggtagcaacatgactcagtga
acaggtctggcattcatgtgagctgatgacctgagttcagttctcagaaa
ccaggttgagatatgttggtgcacagttgtaacctcagcgttccttaccc
atcgagatgggaagtgagaatagacgtggatagatgtggtgagttgggag
cgggggacatgaggatggcacagaagatcctgggacagccagcctggagt
acagagtatggctgaaacaagagagatccctcctcaacaggtggaaagag
aggactgaatcctctaaagtgtcctttgccttccacatgtacacaca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagttcaaaaattcaggtgagagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagaactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctccacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactctctgataagtggatattagccccaatcc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aaaggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtagccaaggacctaaaggatctgcaccctat
agcggaacacattatgaactacagtaccccggagctcttgactctagctg
catatgtatcaaagatggctaatcggcatcattggaagagaaagccattg
aaacgcaacttatatgcccagtacaggggacgcccaggcccaataggggg
agttggtgtgtatgagtgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_52995354_52995800
seq2: B6Ng01-112B11.b_32_478

seq1  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAGAAAAA  50

seq1  ACAAACCAAAAAAACAACAAAAAACCAAAGAGTCAGAGTCTGACTCGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCAAAAAAACAACAAAAAACCAAAGAGTCAGAGTCTGACTCGGTG  100

seq1  TTACTATCCTCTTTCAAATCACAGATGTAGGTAGCAACATGACTCAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCCTCTTTCAAATCACAGATGTAGGTAGCAACATGACTCAGTGA  150

seq1  ACAGGTCTGGCATTCATGTGAGCTGATGACCTGAGTTCAGTTCTCAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCTGGCATTCATGTGAGCTGATGACCTGAGTTCAGTTCTCAGAAA  200

seq1  CCAGGTTGAGATATGTTGGTGCACAGTTGTAACCTCAGCGTTCCTTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTGAGATATGTTGGTGCACAGTTGTAACCTCAGCGTTCCTTACCC  250

seq1  ATCGAGATGGGAAGTGAGAATAGACGTGGATAGATGTGGTGAGTTGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGATGGGAAGTGAGAATAGACGTGGATAGATGTGGTGAGTTGGGAG  300

seq1  CGGGGGACATGAGGATGGCACAGAAGATCCTGGGACAGCCAGCCTGGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGGACATGAGGATGGCACAGAAGATCCTGGGACAGCCAGCCTGGAGT  350

seq1  ACAGAGTATGGCTGAAACAAGAGAGATCCCTCCTCAACAGGTGGAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTATGGCTGAAACAAGAGAGATCCCTCCTCAACAGGTGGAAAGAG  400

seq1  AGGACTGAATCCTCTAAAGTGTCCTTTGCCTTCCACATGTACACACA  447
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGAATCCTCTAAAGTGTCCTTTGCCTTCCACATGTACACACA  447