BAC Information

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BAC

Clone NameB6Ng01-112P07
Chromosome14 (Build37)
Map Location 39,694,136 - 39,695,162
singlet/doubletsinglet
Overlap geneNrg3
Upstream geneLOC382872, LOC100041521
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112P07.bB6Ng01-112P07.g
ACCDH918878DH918879
length1,1691,023
definitionDH918878|Mus musculus domesticus DNA, BAC clone: B6Ng01-112P07, 5' end.DH918879|Mus musculus domesticus DNA, BAC clone: B6Ng01-112P07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttagctctgtttaccatttttaattgggttacttgattctt
tggagtctaccttcttgaattttttttaatatattttggatattatgccc
ctatcaaaagtaggattagtgaagatctttccccaatctgtaagttgcca
tattgtcaaggtctcactatttgtggatgatatgatagtaaacataagca
tcctcaaatattctaccagagaactcctacacctgattaacaggttcagc
aaagtggctggggataaaattaactcacaaatcagtagccttcctttata
taaaggataaatggactgagaaattaggggaaaatacccttcacaatagt
cagaaataatatgaaatatcttggtgtaactctaaccaagtgagtggaag
atatgtgtgtaaagaacttcaagtctctgaagaaagaattcaaagaaggc
ctcagaatatggaaagatctcccatgttcattgatcaacaggattaacat
agtgaaaatggccatcttaccaagaacaatctacagattcaatgtaatcc
ccatcaaaattccaattcaattcttcatagacataaaaagaacaattctc
agcttcatatgaaacactaaaaaaccaaggatagcaaaaacaattctcaa
caataaaagagcttctgggtgaatcaccatgcctgacctcaagttgtact
acggagcaattgtgataaaaactgcatggtatagatacagagacaaatag
atagatggatggaatagaattgaagacccagatataaacccacacaccta
cagacacttgatctttgacaaagaagccaaaacaatgcaataaggggaaa
aaaaggaaactttttcaaaaaatggtgctggactagctgaggtctgtatt
gcaagaagattgcaattgatcatattattcatcttttacaaaattcaact
tcaaatgatcagagactcaactaaaactaggtaactgaaatggaaataga
gaaaggtggggaatattcttcaacacattggcacagaataaatttcctga
aatgatcacagtggctcagactcttaagaaaaacataacaaaaggtaccc
tcatgtaacgaaaagcttctgtaggcaggaacttctcaaatgaatactat
atttaaggtgtgggatcta
gaattcacatgttgaggactaatctgagcaagtaatctgtaatagttatg
tatgtattactgtagaaacagaaaatatattaagaatgagtaagttgctc
acataaagaaactcttgggtaaagttcaaatgctgtgcaatgttttatct
gcatgaataatgtctgctcccagtgaagtcattaccttcaccagctgtga
tcatgttgcagggcttgcccatgcatctcaggtggtactctctcttgacc
aattttattggttctcctctattttcacagagttatgtatagcaaagatg
gttagccatgccttaagaaccactgttcatgtcaaaaggtaattacaagg
tgggaattgtgttcagaacaatactgccccatgcaaataaagtggagggg
agaatgtaagggaactatgagcagctgtcataaaaccttgcataataacc
taagtcatgctgggcactgacatggggtaggaagagaataaagttgtgct
ccttcttcctagattgctgctgcaaatttagcagtggaaatattgcctct
cctgtatgtggttaacagaataaagtgccaggagtaaggagctggtaaga
cctgggtaggggatacatttatgtagaccatatagtaatagcagatttta
aggcactcttggtccagtgaaagaggccgcaggagtaaacggtcattatt
ttgagagaaaataggaattcatcctcaaaaagaaaaaaaaaaagattggt
tatatgttttgtatttaagatcacagaaacaagtatgtgcttcccactgc
taatgaactagaacagttgtgaaatgaagacagagaatggagctgggaga
caactggggttttactgtttttaccctactaagtacactagacatcagtg
taaggatattagctttttagttagctttctcacttgtgtgaatagaacaa
gaccacacacacacacacagaaaagagagagagagagggagaataggcac
agatcagacactgaccggacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_39694136_39695162
seq2: B6Ng01-112P07.g_68_1090 (reverse)

seq1  --TGT---GTCTGTGTCTGTGTCTGTGCCTATGTCTCCCTCTCTCTCTCT  45
        |||   ||| |||||||  ||||||||||| |||||||||||||||||
seq2  TGTGTCCGGTCAGTGTCTG-ATCTGTGCCTAT-TCTCCCTCTCTCTCTCT  48

seq1  CTTTTTCTGTGTGTGTGTGTGTGTGTCTTTGTTTCTATTTCACACAAGTG  95
      | ||||||||||||||||||||| |||||   ||||| ||||||||||||
seq2  C-TTTTCTGTGTGTGTGTGTGTG-GTCTT--GTTCTA-TTCACACAAGTG  93

seq1  AGAAAGCTAACTAAAAAGCTAATATCCCTTACACTGATGTCTAGTGTACT  145
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAAAGCTAACTAAAAAGCTAATAT-CCTTACACTGATGTCTAGTGTACT  142

seq1  TAGTAGGGTAAAAAACAGTAAAACCCCAGTTGTCTCCCAGCTCCATTCTC  195
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGGT-AAAAACAGTAAAACCCCAGTTGTCTCCCAGCTCCATTCTC  191

seq1  TGTCTTCATTTCACAACTGTTCTAGTTCATTAGCAGTGGGAAGCACATAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCATTTCACAACTGTTCTAGTTCATTAGCAGTGGGAAGCACATAC  241

seq1  TTGTTTCTGTGATCTTAAATACAAAACATATAACCAATCTTTTTTTTTTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTGTGATCTTAAATACAAAACATATAACCAATCTTTTTTTTTTT  291

seq1  CTTTTTGAGGATGAATTCCTATTTTCTCTCAAAATAATGACCGTTTACTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGAGGATGAATTCCTATTTTCTCTCAAAATAATGACCGTTTACTC  341

seq1  CTGCGGCCTCTTTCACTGGACCAAGAGTGCCTTAAAATCTGCTATTACTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGGCCTCTTTCACTGGACCAAGAGTGCCTTAAAATCTGCTATTACTA  391

seq1  TATGGTCTACATAAATGTATCCCCTACCCAGGTCTTACCAGCTCCTTACT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCTACATAAATGTATCCCCTACCCAGGTCTTACCAGCTCCTTACT  441

seq1  CCTGGCACTTTATTCTGTTAACCACATACAGGAGAGGCAATATTTCCACT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCACTTTATTCTGTTAACCACATACAGGAGAGGCAATATTTCCACT  491

seq1  GCTAAATTTGCAGCAGCAATCTAGGAAGAAGGAGCACAACTTTATTCTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATTTGCAGCAGCAATCTAGGAAGAAGGAGCACAACTTTATTCTCT  541

seq1  TCCTACCCCATGTCAGTGCCCAGCATGACTTAGGTTATTATGCAAGGTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCCCATGTCAGTGCCCAGCATGACTTAGGTTATTATGCAAGGTTT  591

seq1  TATGACAGCTGCTCATAGTTCCCTTACATTCTCCCCTCCACTTTATTTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAGCTGCTCATAGTTCCCTTACATTCTCCCCTCCACTTTATTTGC  641

seq1  ATGGGGCAGTATTGTTCTGAACACAATTCCCACCTTGTAATTACCTTTTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGCAGTATTGTTCTGAACACAATTCCCACCTTGTAATTACCTTTTG  691

seq1  ACATGAACAGTGGTTCTTAAGGCATGGCTAACCATCTTTGCTATACATAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAACAGTGGTTCTTAAGGCATGGCTAACCATCTTTGCTATACATAA  741

seq1  CTCTGTGAAAATAGAGGAGAACCAATAAAATTGGTCAAGAGAGAGTACCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAAAATAGAGGAGAACCAATAAAATTGGTCAAGAGAGAGTACCA  791

seq1  CCTGAGATGCATGGGCAAGCCCTGCAACATGATCACAGCTGGTGAAGGTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGATGCATGGGCAAGCCCTGCAACATGATCACAGCTGGTGAAGGTA  841

seq1  ATGACTTCACTGGGAGCAGACATTATTCATGCAGATAAAACATTGCACAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTCACTGGGAGCAGACATTATTCATGCAGATAAAACATTGCACAG  891

seq1  CATTTGAACTTTACCCAAGAGTTTCTTTATGTGAGCAACTTACTCATTCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAACTTTACCCAAGAGTTTCTTTATGTGAGCAACTTACTCATTCT  941

seq1  TAATATATTTTCTGTTTCTACAGTAATACATACATAACTATTACAGATTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATTTTCTGTTTCTACAGTAATACATACATAACTATTACAGATTA  991

seq1  CTTGCTCAGATTAGTCCTCAACATGTGAATTC  1027
      ||||||||||||||||||||||||||||||||
seq2  CTTGCTCAGATTAGTCCTCAACATGTGAATTC  1023