BAC Information

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BAC

Clone NameB6Ng01-113A17
Chromosome14 (Build37)
Map Location 110,733,203 - 110,734,014
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113A17.bB6Ng01-113A17.g
ACCDH918940DH918941
length1,202818
definitionDH918940|Mus musculus domesticus DNA, BAC clone: B6Ng01-113A17, 5' end.DH918941|Mus musculus domesticus DNA, BAC clone: B6Ng01-113A17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtattccatttttcaatagggttatttgatt
ctctggagtctaacttcttgagttctttatatatattgaatattagccct
ctatcgactgtaggattggtaaagatcttttcccaatatgttggttgccg
ttttgcaccattgacagtgtcctttacattacagaagctttgcaatttta
tgaggtccaatttgtcaactcttgatcttagagcataagttatgtgtgtt
ctgttcaggaaaatttcccctgttcccatttattcgaggctcttccccac
tttctcctctctaagtttcagtgtatctgtttttttgtggaggtcatttt
tcgacttggacttgagctttgtacaaggaagtaagaacaagaaactggaa
agaatccagatgtccctgaacagaggaatgaatacagaaagtgtggtata
tttacacaatggagtactagtcagctattaaaaacaaggcattcatgaaa
ttcttagacaaattgatggaaatcgaaaatattatcctgagtaaggtaac
ccaattacaaaagaacacacattgtatgcactcactgataaatggatatt
aaccctaaagctcagaatactcaagatacaattcacagaccacatgaagc
tcaagaagaaggaaaagcaaagtatggatgctgcagtccttcttagaagg
acataattcctcatggggggaattatggagaaaaattgtgaaacagagac
tgaatgaaggaaggaccatacagagactgctccacctggggatccatcgt
atatacagtcaccaaactgagacactattgtggatgccaagaagtgcttg
ttgacaggagcctgttatagctctctcctgagaggctatgccagagcctg
acaaatacagagatagatgctaccagccaaccattgggctgatccctatg
gtccttatagaagagttttagaaagactgatggaactgaaggggtttcca
cccatatggaaaaacaacagtattaaccaaccaagactccttagaactct
ttaagggacttatccaccaaccaaagagtacctatgggagtactctcatg
ggtccactgccaatgattcaaggatggccctatggcactccttggggagg
ggagaggcctggccatgcaagagcttgctgtcctcgtggttaggtataag
tc
gaattcttagtaatttacattggattaagaaaagggaacatttcaatgct
atctgatcttcacagtaacaacattggccacaaattgagcaacatacatg
tcagttgcttgcatacagtgtcccaaatatgtagagcatgtaagaagggt
tgtgacctctgctttctatgcagggtaactccagcttagagagattgggt
gacttgcctggggcctcccagcttgtgagtggtagagactaaaataataa
gaacactttgtgaatacagacaaatacacattggaaggacacatcatgca
cgagccagcatgacccttttttttttttccttttccattttttattaggt
atttagctcatttacatttccaatgctataccaaaagtaccccatagcca
cccatccccactcccctacccacctactccccctttttggccctggcgtt
cccctgtactggggcatataaagtttgtgtgtccaatggggctctctttc
cagtgatggccgactaggccatcttttgatacatatgcagctagagtcaa
gagctcaggggtactggttagttcataatgttgttccacctatagggtta
cagatccctttagctccttgggtactttctctagctcctccattgggagc
cctgtgatccattctttagctgactgtgagcatccacttctgtgtttgct
aggcccgggcatagtctcacaagagacagctacatctgggtccttttcaa
taaaatcttgctagtgtatgcaattggtgtcagtggtttgggatgcggaa
ttatggggggggatccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110733203_110734014
seq2: B6Ng01-113A17.g_69_886

seq1  GAATTCTTAGCAATTTACATTGGATTAAGAAAAGGGAACATTTCAATGCT  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGTAATTTACATTGGATTAAGAAAAGGGAACATTTCAATGCT  50

seq1  ATCTGATCTTCACAGTAACAACATTGGCCACAAATTGAGCAACATACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATCTTCACAGTAACAACATTGGCCACAAATTGAGCAACATACATG  100

seq1  TCAGTTGCTTGCATACAGTGTCCCAAATATGTAGAGCATGTAAGAAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGCTTGCATACAGTGTCCCAAATATGTAGAGCATGTAAGAAGGGT  150

seq1  TGTGACCTCTGCTTTCTATGCAGGGTAACTCCAGCTTAGAGAGATTGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCTCTGCTTTCTATGCAGGGTAACTCCAGCTTAGAGAGATTGGGT  200

seq1  GACTTGCCTGGGGCCTCCCAGCTTGTGAGTGGTAGAGACTAAAATAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCCTGGGGCCTCCCAGCTTGTGAGTGGTAGAGACTAAAATAATAA  250

seq1  GAACACTTTGTGAATACAGACAAATACACATTGGAAGGACACATCATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTTGTGAATACAGACAAATACACATTGGAAGGACACATCATGCA  300

seq1  CGAGCCAGCATGACCCTTTTTTTTTTTTCCTTTTCCATTTTTTATTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCAGCATGACCCTTTTTTTTTTTTCCTTTTCCATTTTTTATTAGGT  350

seq1  ATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTACCCCATAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTACCCCATAGCCA  400

seq1  CCCATCCCCACTCCCCTACCCACCTACTCCCCCTTTTTGGCCCTGGCGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCCCACTCCCCTACCCACCTACTCCCCCTTTTTGGCCCTGGCGTT  450

seq1  CCCCTGTACTGGGGCATATAAAGTTTGTGTGTCCAATGGGGCTCTCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTACTGGGGCATATAAAGTTTGTGTGTCCAATGGGGCTCTCTTTC  500

seq1  CAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAA  550

seq1  GAGCTCAGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTA  600

seq1  CAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGC  650

seq1  CCTGTGATCCATTCTTTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGATCCATTCTTTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCT  700

seq1  AGGCCCGGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCC-TTTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGCCCGGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTTCAA  750

seq1  TAAAATCTTGCTAGTGTATGCAA-TGGTGTCAGTG--TTTGGATGCGG-A  795
      ||||||||||||||||||||||| |||||||||||  || |||||||| |
seq2  TAAAATCTTGCTAGTGTATGCAATTGGTGTCAGTGGTTTGGGATGCGGAA  800

seq1  TTAT-GGGGTGGATCCCT  812
      |||| |||| ||||||||
seq2  TTATGGGGGGGGATCCCT  818