BAC Information

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BAC

Clone NameB6Ng01-115A05
Chromosome14 (Build37)
Map Location 77,979,205 - 78,107,550
singlet/doubletdoublet
Overlap geneD230005D02Rik
Upstream geneLOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, LOC100043755, LOC676171, EG629678
Downstream geneGm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11, Dgkh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115A05.bB6Ng01-115A05.g
ACCDH920386DH920387
length1,202184
definitionDH920386|Mus musculus domesticus DNA, BAC clone: B6Ng01-115A05, 5' end.DH920387|Mus musculus domesticus DNA, BAC clone: B6Ng01-115A05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,106,335 - 78,107,550)(77,979,205 - 77,979,388)
sequence
gaattccagcagtgaaagttcaataaaacaaaacaaaaaaagaaataacc
cactttaccttagagtccagctgctgcatgtatgaccacagatactctat
attagctccaaaggggtgaacgtgaagaaacgttgatatgatgcctgcat
taaaacaaacaaaataaaaaagataagcgtcgttaagttctttggaggag
agtggggaggagtctcagttaactaataccatctgacctcgccaaccttc
gcaagaccgggtcacgtggtctgaccatttccaacacctctcaaccagca
tccactaacagcacactctgcagacagtaacagtgatgcagcagaagaca
cggaagagaatggggatgtctggcggccagcgtggctagactctgggaag
atgcatagatggatagaagtatttctaaaccaaggctccgggaagctgga
agcaacccaacctaccaagtgtatgctcgatttacggatctgaaatcgta
gttttttggaaggttaaaatgatctatttttctctcaatggactttgtag
tctgaaaatagcttagacagctgtgtcagagatcacgttgcctcgagtgt
ccttgataattacagtctctggttatgaaacgggagtaattcacttcccg
acgtgggctccacgcaactcgtgccacttccgcaggctgaggctgctggg
gaaaggcatccgggcggtcccctctcctctgctctaactcacgctggtca
tcatttgtaaaggtctggggacccgtgctctgcagaaattcttcccatct
tggtcttactgacaaatggcaggattatcagtgtcaggaccgaactgaaa
agcgtgacctccattcccatcctccctgctaaaagcgaaaccgtgaggga
gtcagttccacagaccgtgggctgctcttggtggaaaggtcaagcttaga
gggaggctaaagtctttagtcagtgtggtttgtgctatatctcccacact
gcgtactaggagactgatgctggcgagtcaaaggtcacctgcctaaagca
gtcagggcaggcaccggccaagcagcagccagcctacacttgcagggtct
gggactgatagggatggtgtttgtccctctgtccttccttgtgagatggg
atgctacggatggaggtgccaaccaggatcagacagtccagcttatctta
gg
cacagagtttctaattaatgttctcaagtgcgtattagatgaaaagcaat
attttgagtactgaggaccattattattattggatgtaatcctctggggg
ggagtaaagtactctctcagaataatttcagtttcttaaaagtgcatttc
caatcttcaccccggggtgtgggggggtgtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78106335_78107550
seq2: B6Ng01-115A05.b_46_1247 (reverse)

seq1  CCTAAGATAAGCTGGGAACTTGTCTTTGAATCCTGGTTGGCAC--TCATC  48
      |||||||||||||||  || |||||    ||||||||||||||   ||||
seq2  CCTAAGATAAGCTGG--AC-TGTCT---GATCCTGGTTGGCACCTCCATC  44

seq1  CGTGAGCATCCCATACATCACAAAGGAAGACAGAGGGACAAACACCATCC  98
      ||| ||||||||||   |||||| | | ||||||||||||||||||||||
seq2  CGT-AGCATCCCAT--CTCACAAGGAAGGACAGAGGGACAAACACCATCC  91

seq1  CTAATCAGTTCCAGACCCCTGCAAGTGTAGGCTGGCCTGCTGCTTGGCCG  148
      || |||||| ||||| ||||||||||||||||||| ||||||||||||||
seq2  CT-ATCAGTCCCAGA-CCCTGCAAGTGTAGGCTGG-CTGCTGCTTGGCCG  138

seq1  GTGCCTGCCCTGACTGCCTTTTAGGCAGGTGACCTTTGACTCGCCAGCAT  198
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  GTGCCTGCCCTGACTGC--TTTAGGCAGGTGACCTTTGACTCGCCAGCAT  186

seq1  CAGTTCTCCTAGTACGCAGTGTGGGAGATATAGCACAAACCACACCTGAC  248
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAG-TCTCCTAGTACGCAGTGTGGGAGATATAGCACAAACCACA-CTGAC  234

seq1  TAAAGACTTTAGCCTCCCTCTAAGCTTGACCTTTCCACCAAGAGCAGCCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTTTAGCCTCCCTCTAAGCTTGACCTTTCCACCAAGAGCAGCCC  284

seq1  ACGGTCTGTGGAACTGACTCCCTCACGGTTTCGCTTTTAGCAGGGAGGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCTGTGGAACTGACTCCCTCACGGTTTCGCTTTTAGCAGGGAGGAT  334

seq1  GGGAATGGAGGTCACGCTTTTCAGTTCGGTCCTGACACTGATAATCCTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGGAGGTCACGCTTTTCAGTTCGGTCCTGACACTGATAATCCTGC  384

seq1  CATTTGTCAGTAAGACCAAGATGGGAAGAATTTCTGCAGAGCACGGGTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTCAGTAAGACCAAGATGGGAAGAATTTCTGCAGAGCACGGGTCC  434

seq1  CCAGACCTTTACAAATGATGACCAGCGTGAGTTAGAGCAGAGGAGAGGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCTTTACAAATGATGACCAGCGTGAGTTAGAGCAGAGGAGAGGGG  484

seq1  ACCGCCCGGATGCCTTTCCCCAGCAGCCTCAGCCTGCGGAAGTGGCACGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCCCGGATGCCTTTCCCCAGCAGCCTCAGCCTGCGGAAGTGGCACGA  534

seq1  GTTGCGTGGAGCCCACGTCGGGAAGTGAATTACTCCCGTTTCATAACCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCGTGGAGCCCACGTCGGGAAGTGAATTACTCCCGTTTCATAACCAG  584

seq1  AGACTGTAATTATCAAGGACACTCGAGGCAACGTGATCTCTGACACAGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTAATTATCAAGGACACTCGAGGCAACGTGATCTCTGACACAGCT  634

seq1  GTCTAAGCTATTTTCAGACTACAAAGTCCATTGAGAGAAAAATAGATCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGCTATTTTCAGACTACAAAGTCCATTGAGAGAAAAATAGATCAT  684

seq1  TTTAACCTTCCAAAAAACTACGATTTCAGATCCGTAAATCGAGCATACAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCTTCCAAAAAACTACGATTTCAGATCCGTAAATCGAGCATACAC  734

seq1  TTGGTAGGTTGGGTTGCTTCCAGCTTCCCGGAGCCTTGGTTTAGAAATAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGGTTGGGTTGCTTCCAGCTTCCCGGAGCCTTGGTTTAGAAATAC  784

seq1  TTCTATCCATCTATGCATCTTCCCAGAGTCTAGCCACGCTGGCCGCCAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCATCTATGCATCTTCCCAGAGTCTAGCCACGCTGGCCGCCAGA  834

seq1  CATCCCCATTCTCTTCCGTGTCTTCTGCTGCATCACTGTTACTGTCTGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCATTCTCTTCCGTGTCTTCTGCTGCATCACTGTTACTGTCTGCA  884

seq1  GAGTGTGCTGTTAGTGGATGCTGGTTGAGAGGTGTTGGAAATGGTCAGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGCTGTTAGTGGATGCTGGTTGAGAGGTGTTGGAAATGGTCAGAC  934

seq1  CACGTGACCCGGTCTTGCGAAGGTTGGCGAGGTCAGATGGTATTAGTTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGACCCGGTCTTGCGAAGGTTGGCGAGGTCAGATGGTATTAGTTAA  984

seq1  CTGAGACTCCTCCCCACTCTCCTCCAAAGAACTTAACGACGCTTATCTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTCCTCCCCACTCTCCTCCAAAGAACTTAACGACGCTTATCTTT  1034

seq1  TTTATTTTGTTTGTTTTAATGCAGGCATCATATCAACGTTTCTTCACGTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGTTTGTTTTAATGCAGGCATCATATCAACGTTTCTTCACGTT  1084

seq1  CACCCCTTTGGAGCTAATATAGAGTATCTGTGGTCATACATGCAGCAGCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTTTGGAGCTAATATAGAGTATCTGTGGTCATACATGCAGCAGCT  1134

seq1  GGACTCTAAGGTAAAGTGGGTTATTTCTTTTTTTGTTTTGTTTTATTGAA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTAAGGTAAAGTGGGTTATTTCTTTTTTTGTTTTGTTTTATTGAA  1184

seq1  CTTTCACTGCTGGAATTC  1216
      ||||||||||||||||||
seq2  CTTTCACTGCTGGAATTC  1202

seq1: chr14_77979205_77979388
seq2: B6Ng01-115A05.g_72_255

seq1  CACAGAGTTTCTAATTAATGTTCTCAAGTGCGTATTAGATGAAAAGCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGTTTCTAATTAATGTTCTCAAGTGCGTATTAGATGAAAAGCAAT  50

seq1  ATTTTGAGTACTGAGGACCATTATTATTATTGGATGTAATCCTCTGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGTACTGAGGACCATTATTATTATTGGATGTAATCCTCTGGGGG  100

seq1  GGAGTAAAGTACTCTCTCAGAATAATTTCAGTTTCTTAAAAGTGCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAAAGTACTCTCTCAGAATAATTTCAGTTTCTTAAAAGTGCATTTC  150

seq1  CAATCTTCACCCCGGGGTGTGGGGGGGTGTGGGG  184
      ||||||||||||||||||||||||||||||||||
seq2  CAATCTTCACCCCGGGGTGTGGGGGGGTGTGGGG  184