BAC Information

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BAC

Clone NameB6Ng01-115C15
Chromosome14 (Build37)
Map Location 98,402,855 - 98,404,028
singlet/doubletsinglet
Overlap geneDach1
Upstream geneEG668659
Downstream geneLOC635593, LOC619716, LOC100043787
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115C15.bB6Ng01-115C15.g
ACCDH920500DH920501
length1,1571,173
definitionDH920500|Mus musculus domesticus DNA, BAC clone: B6Ng01-115C15, 5' end.DH920501|Mus musculus domesticus DNA, BAC clone: B6Ng01-115C15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctatagcagatcatgatttctggtcgaaccactggagaaaa
gattcaaaggttgacaactaatcaaaccgctatagattttcgttgacact
gatacacagtaacactcggctcagaaatttgaggcagttacctgtatctg
gatatattcgatggtggaggttaagcaaagacacacttatgaaagagatc
agttctatagattcctgctagagtctctgtaattgttagactttcagagg
taaggtaaataagtaatggtgtggtaggggtgatgtgtgactcggtggtg
caacaatagaccagcgcttggagtcctatggggtgtattgtattgagagc
accaccgtcaaaaatgaatatataaacaaatgaataagaataagaaaggg
gtagaaagggaaaagtaagaaaaatactatagaagtccaccattttctgt
atttaaaaaaaagtattcataatttatttgatattacctgacagaattta
aatagttatctcatccatacagctttctagaataggaactaaggtatgtt
atggttcattaaagtcaatatatggtgtttctaattgagaaaatatttag
ttcattcactaaattttagtgtgttgaggtttgattcccagttataaaat
catagttgcaaatagcaagtgccactgtaaaacactctcctgtgaaatgt
agattggtgagctcccgtcaaaaaaaatcatgatcaaacctggcattctt
gtttgacagactttgtggtgaggccaaaggtgtaattagggccagaaaat
tactttctcaccactagaattgttcccttcaggttttgagttatcagtcc
agaaattttcattaaacactaaattcacttttaagacaactgtcaaaatt
aaacagaggtgagtcaagtcaaggtcctaatattcaaatctctcgtttgg
actttgagattcgataccaataaaggctatcagttcaatcttctattcag
acagaacttttcgaaatttcaaaacatgtattctttcttcagaaactgga
gattttatttctcttagtaatcttgatttgaaaataaagaattaatattt
ttactgtaacatgctgccaaagtaaaatcctaggagacattgggagctca
tcatttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatccgtctggcggttgctct
taaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccgaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaacacaag
aaaaatgaagactgaagtatggacagtatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctctttgtgagactatgccgggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccaa
tggaggagctagagaagtacccaaggagctaaagggatctgcaccctata
ggtggatcaacattatgaactactagtacccagagcctcttgactttagc
tgcaaatgtatcaaagatgcctaagcggccatcactggaaaagagctaat
gcaccgcacttttatatgcccagaacaggaatcgccaggcaaataaaggg
atagtggtcatgataggaatgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98402855_98404028
seq2: B6Ng01-115C15.b_43_1199

seq1  GAATTCTTTCTATAGCAGATCATGATTTCTGGTCGAACCACTGGAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATAGCAGATCATGATTTCTGGTCGAACCACTGGAGAAAA  50

seq1  GATTCAAAGGTTGACAACTAATCAAACCGCTATAGATTTTCGTTGACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAGGTTGACAACTAATCAAACCGCTATAGATTTTCGTTGACACT  100

seq1  GATACACAGTAACACTCGGCTCAGAAATTTGAGGCAGTTACCTGTATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACAGTAACACTCGGCTCAGAAATTTGAGGCAGTTACCTGTATCTG  150

seq1  GATATATTCGATGGTGGAGGTTAAGCAAAGACACACTTATGAAAGAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATTCGATGGTGGAGGTTAAGCAAAGACACACTTATGAAAGAGATC  200

seq1  AGTTCTATAGATTCCTGCTAGAGTCTCTGTAATTGTTAGACTTTCAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATAGATTCCTGCTAGAGTCTCTGTAATTGTTAGACTTTCAGAGG  250

seq1  TAAGGTAAATAAGTAATGGTGTGGTAGGGGTGATGTGTGACTCGGTGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTAAATAAGTAATGGTGTGGTAGGGGTGATGTGTGACTCGGTGGTG  300

seq1  CAACAATAGACCAGCGCTTGGAGTCCTATGGGGTGTATTGTATTGAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATAGACCAGCGCTTGGAGTCCTATGGGGTGTATTGTATTGAGAGC  350

seq1  ACCACCGTCAAAAATGAATATATAAACAAATGAATAAGAATAAGAAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCGTCAAAAATGAATATATAAACAAATGAATAAGAATAAGAAAGGG  400

seq1  GTAGAAAGGGAAAAGTAAGAAAAATACTATAGAAGTCCACCATTTTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAGGGAAAAGTAAGAAAAATACTATAGAAGTCCACCATTTTCTGT  450

seq1  ATTTAAAAAAAAGTATTCATAATTTATTTGATATTACCTGACAGAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAAAAGTATTCATAATTTATTTGATATTACCTGACAGAATTTA  500

seq1  AATAGTTATCTCATCCATACAGCTTTCTAGAATAGGAACTAAGGTATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTATCTCATCCATACAGCTTTCTAGAATAGGAACTAAGGTATGTT  550

seq1  ATGGTTCATTAAAGTCAATATATGGTGTTTCTAATTGAGAAAATATTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCATTAAAGTCAATATATGGTGTTTCTAATTGAGAAAATATTTAG  600

seq1  TTCATTCACTAAATTTTAGTGTGTTGAGGTTTGATTCCCAGTTATAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCACTAAATTTTAGTGTGTTGAGGTTTGATTCCCAGTTATAAAAT  650

seq1  CATAGTTGCAAATAGCAAGTGCCACTGTAAAACACTCTCCTGTGAAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTGCAAATAGCAAGTGCCACTGTAAAACACTCTCCTGTGAAATGT  700

seq1  AGATTGGTGAGCTCCCGTCAAAAAAAATCATGATCAAACCTGGCATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGTGAGCTCCCGTCAAAAAAAATCATGATCAAACCTGGCATTCTT  750

seq1  G-TTGACAGACTTTGTGGTGAGGCCAAAGGTGTAATTA-GGCCAGAAAAT  798
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTTTGACAGACTTTGTGGTGAGGCCAAAGGTGTAATTAGGGCCAGAAAAT  800

seq1  TACTTTCTCACCACTAGAATTGTTCCCTTCAGGTTTTGAGTTATCAGTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCTCACCACTAGAATTGTTCCCTTCAGGTTTTGAGTTATCAGTCC  850

seq1  AGAAAATTTCATTAAACACTAAATTCAC-TTTAAGACAACTGTCAAAATT  897
      ||||| |||||||||||||||||||||| |||||||||||||||||||||
seq2  AGAAATTTTCATTAAACACTAAATTCACTTTTAAGACAACTGTCAAAATT  900

seq1  AAACAGAGGTGAGTCAAGTCAAGGTCCTAATATTCAAATCTCTCGTTTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGGTGAGTCAAGTCAAGGTCCTAATATTCAAATCTCTCGTTTGG  950

seq1  ACTTTGAGATTCGATACCAAATAAAAGGCTATCAGTTCAATCTTCTATTC  997
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  ACTTTGAGATTCGATACCAA--TAAAGGCTATCAGTTCAATCTTCTATTC  998

seq1  AGACAGAACTTTTCGAAAATTTCAAAAACATGTATTCTTTTCTTCAGAAA  1047
      ||||||||||||||| ||||||| ||||||||||||| ||||||||| ||
seq2  AGACAGAACTTTTCG-AAATTTC-AAAACATGTATTC-TTTCTTCAG-AA  1044

seq1  ACTGGAGAATTTCTATTTTCTCTTTAGTAAAATCTTGATTTGAAAAATAA  1097
      |||||||| |||    |||||| |||||  ||||||||||||||||   |
seq2  ACTGGAGATTTT---ATTTCTC-TTAGT--AATCTTGATTTGAAAA--TA  1086

seq1  AAGAAATTAAATATTTTTACTGTAGACATGCTGCAAAAGGAAAAATACTA  1147
      |||||  | ||||||||||||||| ||||||||| ||| | ||||| || 
seq2  AAGAA--TTAATATTTTTACTGTA-ACATGCTGCCAAA-GTAAAATCCT-  1131

seq1  AGGAGACAATTGGGAGCTCATCATTTT  1174
      ||||||| |||||||||||||||||||
seq2  AGGAGAC-ATTGGGAGCTCATCATTTT  1157