BAC Information

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BAC

Clone NameB6Ng01-116A22
Chromosome14 (Build37)
Map Location 15,468,891 - 15,653,898
singlet/doubletdoublet
Overlap geneLOC100042147, Slc4a7
Upstream geneA430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152
Downstream geneNek10, Lrrc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116A22.bB6Ng01-116A22.g
ACCDH921155DH921156
length1,198994
definitionDH921155|Mus musculus domesticus DNA, BAC clone: B6Ng01-116A22, 5' end.DH921156|Mus musculus domesticus DNA, BAC clone: B6Ng01-116A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,652,688 - 15,653,898)(15,468,891 - 15,469,866)
sequence
gaattcaagtcctgatggttagaacacatggagacagtagagaaacaaaa
aggctggatgccaaccaagtcttggcccagcctgacccaggtgagagcag
cagccagaggacacaaggacaactcaggatgaacaaagagagtacacaag
gaggtgaaatggacccgacagaaacctgtgatgtttattcacacaccaca
tcctttgaaaacactacctgctgtttgcttgactgaacgttcaacaggca
ccgaagtcttttaagatctgaatagtccctagaataaagaacagcacaaa
gtcacattactactgatggtactgctactttgaagcctgtctctgtagat
cagggcatgcctgccaaatatttctttccaaactctagaaagggctcagt
gtttgggtaaacactgcaatccaggagacaatttctcacaaaagcgttaa
acctacctaatgccactgctcccatggatgaccacagacatttctttacc
tggtggtggtcccttgttgcttatcagcggttttctctgtgctcttcgcc
tttgtatcttgatcgggcattgtaaaacatcaacacctcagaattaacat
tgcattccttgtgaagtaaacagaaacaactttcagttaggttatgtaat
ccaaagtattctcatttaaaaatagacaaaattcatccatgatgtctatt
caaacatataaaaattaataactgcaattattagattgagtggtactggt
tgtttactttcaaagggtcttcctgggatatattcggggcatttcttcag
cctgtatcttctgaccaagttttcacagatgttattctatatttacaaaa
tatgtctactaataaatacttgaagctcaattggcagtaattttatgcaa
cttcagttgccttcctccgtaactattcttaattgcacatcatgggctca
ccaagattcctatcacacgatgggttgtggcccacaagtctcagggtatg
ggaaacccaccccacagtaagcagtcagtgtcagatgttgcatacttcaa
actcattctctctcatctctctcactctctctccatttcttctcattcat
cttcatcttgcgtctccttcgttcttttggataagaatctcactaggcaa
tcctgaacgtctgggaacctatgtacaccaggctggcgtggaccacag
gaattcaatccctagcagcattatgtagcagtacccacatgatggaagga
gagaaatgactcctgaaaattatcctctgaccacagcacttgtgcatgaa
ttatgagcatatgtacacacaaaacagtgaaagtgaaaaacaattaattt
aatgagttggaaaaattgccaatgctcaaatttcagtaaccaattaatag
aatgagtcactgaacaatggcatatgttccgataagtacaatttcatcat
acacaaatatagtgtgctaacacgaacctagacaggataataggtaacct
agtatgaactttggctttataatgtcgcctttttctcttgggctatgagc
taggacagcacattactacactaaatactgaggaaattataatccaaggg
tattcatatgtataaacgtattcaaaaatagaaaaagctggtatggtgtg
tgttttagtttgtgtgatacaaagcatgactgccttggtcagtgttctat
tgctataaagagacatcatgaccatggcactcttaggacttgcttacagt
ttcagaggttcagcccattgctatcatggcaggaagatagcaatacatgc
agcataggaagatgtggtgctgaagcagctgacagttctacatcagacct
gcaaacggtatgaaaagagagcctctgggcccggcttgggcttcagaaac
ctcaaagctcacttcaacgacatatgtccttcactaaggccatatctcct
aatcctttcaaataatgccagtcctaggtgatcaagctttaaatctatga
gcctatggaagccatttttattccacctaccacaataaccaaaatttcca
aaagcaacgtggaaaggagaggtttattttcacttatactttatagtcaa
tccatcgctcacagtgaagcagatcttgcaggcagacactgaagcagata
ccatggagaaatattgctactggctgggttttccctggttctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15652688_15653898
seq2: B6Ng01-116A22.b_48_1245 (reverse)

seq1  CTGTGGT-CAAGCCAGCTTGGTGTACATGAGTTCCAGGACGGTCAGGGAT  49
      ||||||| || |||||| ||||||||||  |||||  |||| |||||  |
seq2  CTGTGGTCCACGCCAGCCTGGTGTACATAGGTTCCCAGACGTTCAGGATT  50

seq1  GCCTAGTGAGA-TCTTATCTTTAAAAGAAAGGAAGGAAGAAGGAAAGAAA  98
      ||||||||||| |||||||        ||| ||| |||| ||  | | ||
seq2  GCCTAGTGAGATTCTTATC-------CAAAAGAACGAAGGAG--ACGCAA  91

seq1  GA--AAGAATGAATGAAGAAGAAAGAGAGAGAGAGAGGAGAGAGAGGAGA  146
      ||  ||| ||||||| ||||||||  |||||||||  |||||||| ||||
seq2  GATGAAG-ATGAATG-AGAAGAAATGGAGAGAGAG-TGAGAGAGATGAGA  138

seq1  GAGAATGAGTTTTGGAAGTATGGCAACATCTTGACACTGACTGCTTACTT  196
      ||||||||||||  ||||||| |||||||| |||||||||||||||||| 
seq2  GAGAATGAGTTT--GAAGTAT-GCAACATC-TGACACTGACTGCTTACTG  184

seq1  GTGAGTGGGTTTCCCTTTCTCTGAGACTTGTGGGGCCACAACCCATCGTG  246
        | ||||||||||| | | ||||||||||| ||||||||||||||||||
seq2  TGGGGTGGGTTTCCCATACCCTGAGACTTGT-GGGCCACAACCCATCGTG  233

seq1  TGATAGGAATCTTGGTGAGCCCATGATGTGCAATTAAGAATAGTTACGGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGAATCTTGGTGAGCCCATGATGTGCAATTAAGAATAGTTACGGA  283

seq1  GGAAGGCAACTGAAGTTGCATAAAATTACTGCCAATTGAGCTTCAAGTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCAACTGAAGTTGCATAAAATTACTGCCAATTGAGCTTCAAGTAT  333

seq1  TTATTAGTAGACATATTTTGTAAATATAGAATAACATCTGTGAAAACTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTAGACATATTTTGTAAATATAGAATAACATCTGTGAAAACTTG  383

seq1  GTCAGAAGATACAGGCTGAAGAAATGCCCCGAATATATCCCAGGAAGACC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAGATACAGGCTGAAGAAATGCCCCGAATATATCCCAGGAAGACC  433

seq1  CTTTGAAAGTAAACAACCAGTACCACTCAATCTAATAATTGCAGTTATTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAGTAAACAACCAGTACCACTCAATCTAATAATTGCAGTTATTA  483

seq1  ATTTTTATATGTTTGAATAGACATCATGGATGAATTTTGTCTATTTTTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATATGTTTGAATAGACATCATGGATGAATTTTGTCTATTTTTAA  533

seq1  ATGAGAATACTTTGGATTACATAACCTAACTGAAAGTTGTTTCTGTTTAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAATACTTTGGATTACATAACCTAACTGAAAGTTGTTTCTGTTTAC  583

seq1  TTCACAAGGAATGCAATGTTAATTCTGAGGTGTTGATGTTTTACAATGCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAGGAATGCAATGTTAATTCTGAGGTGTTGATGTTTTACAATGCC  633

seq1  CGATCAAGATACAAAGGCGAAGAGCACAGAGAAAACCGCTGATAAGCAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCAAGATACAAAGGCGAAGAGCACAGAGAAAACCGCTGATAAGCAAC  683

seq1  AAGGGACCACCACCAGGTAAAGAAATGTCTGTGGTCATCCATGGGAGCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACCACCACCAGGTAAAGAAATGTCTGTGGTCATCCATGGGAGCAG  733

seq1  TGGCATTAGGTAGGTTTAACGCTTTTGTGAGAAATTGTCTCCTGGATTGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTAGGTAGGTTTAACGCTTTTGTGAGAAATTGTCTCCTGGATTGC  783

seq1  AGTGTTTACCCAAACACTGAGCCCTTTCTAGAGTTTGGAAAGAAATATTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTACCCAAACACTGAGCCCTTTCTAGAGTTTGGAAAGAAATATTT  833

seq1  GGCAGGCATGCCCTGATCTACAGAGACAGGCTTCAAAGTAGCAGTACCAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCATGCCCTGATCTACAGAGACAGGCTTCAAAGTAGCAGTACCAT  883

seq1  CAGTAGTAATGTGACTTTGTGCTGTTCTTTATTCTAGGGACTATTCAGAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTAATGTGACTTTGTGCTGTTCTTTATTCTAGGGACTATTCAGAT  933

seq1  CTTAAAAGACTTCGGTGCCTGTTGAACGTTCAGTCAAGCAAACAGCAGGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGACTTCGGTGCCTGTTGAACGTTCAGTCAAGCAAACAGCAGGT  983

seq1  AGTGTTTTCAAAGGATGTGGTGTGTGAATAAACATCACAGGTTTCTGTCG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTCAAAGGATGTGGTGTGTGAATAAACATCACAGGTTTCTGTCG  1033

seq1  GGTCCATTTCACCTCCTTGTGTACTCTCTTTGTTCATCCTGAGTTGTCCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATTTCACCTCCTTGTGTACTCTCTTTGTTCATCCTGAGTTGTCCT  1083

seq1  TGTGTCCTCTGGCTGCTGCTCTCACCTGGGTCAGGCTGGGCCAAGACTTG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCTCTGGCTGCTGCTCTCACCTGGGTCAGGCTGGGCCAAGACTTG  1133

seq1  GTTGGCATCCAGCCTTTTTGTTTCTCTACTGTCTCCATGTGTTCTAACCA  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATCCAGCCTTTTTGTTTCTCTACTGTCTCCATGTGTTCTAACCA  1183

seq1  TCAGGACTTGAATTC  1211
      |||||||||||||||
seq2  TCAGGACTTGAATTC  1198

seq1: chr14_15468891_15469866
seq2: B6Ng01-116A22.g_68_1041

seq1  GAATTCAATCCCTAGCAGCATTATGTAGCAGTACCCACATGATGGAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCTAGCAGCATTATGTAGCAGTACCCACATGATGGAAGGA  50

seq1  GAGAAATGACTCCTGAAAATTATCCTCTGACCACAGCACTTGTGCATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGACTCCTGAAAATTATCCTCTGACCACAGCACTTGTGCATGAA  100

seq1  TTATGAGCATATGTACACACAAAACAGTGAAAGTGAAAAACAATTAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGCATATGTACACACAAAACAGTGAAAGTGAAAAACAATTAATTT  150

seq1  AATGAGTTGGAAAAATTGCCAATGCTCAAATTTCAGTAACCAATTAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTGGAAAAATTGCCAATGCTCAAATTTCAGTAACCAATTAATAG  200

seq1  AATGAGTCACTGAACAATGGCATATGTTCCGATAAGTACAATTTCATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTCACTGAACAATGGCATATGTTCCGATAAGTACAATTTCATCAT  250

seq1  ACACAAATATAGTGTGCTAACACGAACCTAGACAGGATAATAGGTAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATATAGTGTGCTAACACGAACCTAGACAGGATAATAGGTAACCT  300

seq1  AGTATGAACTTTGGCTTTATAATGTCGCCTTTTTCTCTTGGGCTATGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAACTTTGGCTTTATAATGTCGCCTTTTTCTCTTGGGCTATGAGC  350

seq1  TAGGACAGCACATTACTACACTAAATACTGAGGAAATTATAATCCAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGCACATTACTACACTAAATACTGAGGAAATTATAATCCAAGGG  400

seq1  TATTCATATGTATAAACGTATTCAAAAATAGAAAAAGCTGGTATGGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATGTATAAACGTATTCAAAAATAGAAAAAGCTGGTATGGTGTG  450

seq1  TGTTTTAGTTTGTGTGATACAAAGCATGACTGCCTTGGTCAGTGTTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGTTTGTGTGATACAAAGCATGACTGCCTTGGTCAGTGTTCTAT  500

seq1  TGCTATAAAGAGACATCATGACCATGGCACTCTTAGGACTTGCTTACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAAAGAGACATCATGACCATGGCACTCTTAGGACTTGCTTACAGT  550

seq1  TTCAGAGGTTCAGCCCATTGCTATCATGGCAGGAAGATAGCAATACATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGTTCAGCCCATTGCTATCATGGCAGGAAGATAGCAATACATGC  600

seq1  AGCATAGGAAGATGTGGTGCTGAAGCAGCTGACAGTTCTACATCAGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGGAAGATGTGGTGCTGAAGCAGCTGACAGTTCTACATCAGACCT  650

seq1  GCAAACGGTATGAAAAGAGAGCCTCTGGGCCCGGCTTGGGCTTCAGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACGGTATGAAAAGAGAGCCTCTGGGCCCGGCTTGGGCTTCAGAAAC  700

seq1  CTCAAAGCCCACTTCAACGACATATGTCCTTCACTAAGGCCATATCTCCT  750
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCTCACTTCAACGACATATGTCCTTCACTAAGGCCATATCTCCT  750

seq1  AATCCTTTCAAATAATGCCAGTCCTAGGTGATCAAGCTTTCAAATCTATG  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATCCTTTCAAATAATGCCAGTCCTAGGTGATCAAGCTTT-AAATCTATG  799

seq1  AGCCTATGGAAGCCATTTTTATTCCACCTACCACAATAACCAAAATTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATGGAAGCCATTTTTATTCCACCTACCACAATAACCAAAATTTCC  849

seq1  AAAAGCAACGTGGAAAGGAGAAGGTTTATTTTCACTTATACTTTATAGTC  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAAGCAACGTGGAAAGGAG-AGGTTTATTTTCACTTATACTTTATAGTC  898

seq1  AATCCATCGCTCACAGTGAAGCAGAACCTGCAGGCAGACACTGAAGCAGA  950
      ||||||||||||||||||||||||| | ||||||||||||||||||||||
seq2  AATCCATCGCTCACAGTGAAGCAGATCTTGCAGGCAGACACTGAAGCAGA  948

seq1  TACCATGGAGAAATATTGCTACTGGC  976
      ||||||||||||||||||||||||||
seq2  TACCATGGAGAAATATTGCTACTGGC  974