BAC Information

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BAC

Clone NameB6Ng01-117E12
Chromosome14 (Build37)
Map Location 99,470,723 - 99,630,462
singlet/doubletdoublet
Overlap gene6720463M24Rik, Dis3, D14Ertd581e
Upstream geneDach1, LOC635593, LOC619716, LOC100043787, 2410129H14Rik
Downstream geneLOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117E12.bB6Ng01-117E12.g
ACCDH922060DH922061
length1,1551,022
definitionDH922060|Mus musculus domesticus DNA, BAC clone: B6Ng01-117E12, 5' end.DH922061|Mus musculus domesticus DNA, BAC clone: B6Ng01-117E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,470,723 - 99,471,894)(99,629,417 - 99,630,462)
sequence
gaattcttccttgaagtggaaaagcagtcctaaattattttgagaacatg
ccctgtaacttttttttttttttttaagatttatttatttattatatgta
agtacactgtagctgtcttcagacgcaccagaagagggcatcagatctca
ttacgggtggttgtgagccaccatgtggttgctgggatttgaacttcgga
cctttggaagagcagtcgggtgctcttacccactgagccatctcaccagc
ccatgccctgtaacttttataagcattcttttaatgtggacacagtggca
catgccttcaatcccagcactctggagtctaaggcaaaatttacagccaa
acaggattagtgttaaacaaatatgctatagctggtctgctcttaatctt
gaacttttactgtgtctaatttgtaagctaaatcttatcacagtatgtgt
aggtaagaaaaacataatagacatagtttttgtttggtaatatctgtagt
ttcaggcagcctggagtgtctttgaagggaccctccatggtaagtgggaa
aaatgtactaacttaaaagcgtacaaatctcttctcctttggggcaaggc
cgtatgttttaaaatataacaattttttataatgtaccactatgaagaat
tcgatgagtattattcaggcttcctttatttttatatgacttttgaatac
tccaaacagtatttagaaacggtacaagcaagccattagagacaagctgg
ggtggtagaccagctggatggggaaactgatggcagcgttttattgtcgc
gttggacaaactcctgaagagcacaaaggaagagcacttggtaacttgtc
tgctgacgctggagagttcacagttccttgcgggaaatgtttcgtaagta
ttaaagtgaacagccttatgattacatattaaagttattcacatgatcac
tattaattatattgttcagatatagcgattatactatatgctcacttagc
ctttacgtttctaaacgattcatgtaaacagaaaatgaatgtgagtttgc
atcggatgattaggtgttttgtttttcatttctccgatgaatatgactat
aacaccagacttgtgtaggtaatcactgtaattgttggacagaaagaaat
tgcaa
gaattcaatctcaaggtgagttaaccctgcacagactggaaatggagaag
cgctgctcctgtgaagtgggaattagcaccacacagctctaggaggccca
catgcagtgagtgaaggcgcagggactgtatggtaagacagaaacagaaa
catgctgtatccagccaggcaggacggcgagcaaccacttggctttctag
tcaggtgcgagcgactgaactcacaccctcattctcagaaggaagcattt
tactgatgaaaccagcttcctagcccctaaatatcaactactctttagaa
aagatggctattgggggcggggagggatctttttcaggtgtttgtttttg
ttttttgtttttttccgagacagggtttctctgtgtagccctggctgtcc
tggaactcactctgtagaccaggctggccttaaactcagaaatcacctgc
ctctgcctccctttaatctccagttggttttacattatgcttttgcggtg
tgctaggggttgaatgagggctttgtgcacactagacaagtactctgcat
tgcggtgtaagctttaacaaagttgctcaggctgcaatccatgcaaccct
cttgtctgagtagcgagggttacaggcccatgtcaccgctgtaaacaaaa
agattcttcttttgagttttagatggaataagcaagaggcatggaggggt
aacttagagcctgactttgagctgtctctgtattccaggtacacttggtt
ggaacattctgtaactgctctctaatagggtactcagtacaatatccttg
actgaaacatttaaagagcttaaaagaagaatttatactgctcagatata
tttatcccttgagtatcctctgtcatgaattcacagaccttttacacggg
aaaaactctgaacttggtgtgggctgcgatgtatctctggggcagtgcag
atctgttcagagcccacctgactgcaaaagaaccctcccggctctcctca
gaagagaacaaaaacagacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99470723_99471894
seq2: B6Ng01-117E12.b_47_1201

seq1  GAATTCTTCCTTGAAGTGGAAAAGCAGTCCTAAATTATTTTGAGAACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTTGAAGTGGAAAAGCAGTCCTAAATTATTTTGAGAACATG  50

seq1  CCCTGTAACTTTTTTTTTTTTTTTTAAGATTTATTTATTTATTATATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAACTTTTTTTTTTTTTTTTAAGATTTATTTATTTATTATATGTA  100

seq1  AGTACACTGTAGCTGTCTTCAGACGCACCAGAAGAGGGCATCAGATCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACTGTAGCTGTCTTCAGACGCACCAGAAGAGGGCATCAGATCTCA  150

seq1  TTACGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGA  200

seq1  CCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGC  250

seq1  CCATGCCCTGTAACTTTTATAAGCATTCTTTTAATGTGGACACAGTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCTGTAACTTTTATAAGCATTCTTTTAATGTGGACACAGTGGCA  300

seq1  CATGCCTTCAATCCCAGCACTCTGGAGTCTAAGGCAAAATTTACAGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTCAATCCCAGCACTCTGGAGTCTAAGGCAAAATTTACAGCCAA  350

seq1  ACAGGATTAGTGTTAAACAAATATGCTATAGCTGGTCTGCTCTTAATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATTAGTGTTAAACAAATATGCTATAGCTGGTCTGCTCTTAATCTT  400

seq1  GAACTTTTACTGTGTCTAATTTGTAAGCTAAATCTTATCACAGTATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTACTGTGTCTAATTTGTAAGCTAAATCTTATCACAGTATGTGT  450

seq1  AGGTAAGAAAAACATAATAGACATAGTTTTTGTTTGGTAATATCTGTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGAAAAACATAATAGACATAGTTTTTGTTTGGTAATATCTGTAGT  500

seq1  TTCAGGCAGCCTGGAGTGTCTTTGAAGGGACCCTCCATGGTAAGTGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCAGCCTGGAGTGTCTTTGAAGGGACCCTCCATGGTAAGTGGGAA  550

seq1  AAATGTACTAACTTAAAAGCGTACAAATCTCTTCTCCTTTGGGGCAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACTAACTTAAAAGCGTACAAATCTCTTCTCCTTTGGGGCAAGGC  600

seq1  CGTATGTTTTAAAATATAACAATTTTTTATAATGTACCACTATGAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATGTTTTAAAATATAACAATTTTTTATAATGTACCACTATGAAGAAT  650

seq1  TCGATGAGTATTATTCAGGCTTCCTTTATTTTTATATGACTTTTGAATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATGAGTATTATTCAGGCTTCCTTTATTTTTATATGACTTTTGAATAC  700

seq1  TCCAAACAGTATTTAGAAACGGTACAAGCAAGCCATTAGAGACAAGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACAGTATTTAGAAACGGTACAAGCAAGCCATTAGAGACAAGCTGG  750

seq1  GGTGGTAGACCAGCTGGATGGGGAAACTGATGGCAGCG-TTTATTGTCGC  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTGGTAGACCAGCTGGATGGGGAAACTGATGGCAGCGTTTTATTGTCGC  800

seq1  GTTGGACAAACTCCTGAAGAGCACAAAGGAAGAGCACTTGGTAACTTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACAAACTCCTGAAGAGCACAAAGGAAGAGCACTTGGTAACTTGTC  850

seq1  TGCTGACGCTGGAGAGTTCACAGTTCCTTGCGGGAAATGTTTCGTAAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCTGACGCTGGAGAGTTCACAGTTCCTTGCGGGAAATGTTTCGT-AAGT  899

seq1  ATTAAAGTGAACAGCCTTTATGATTACAATATTAAAGTTATTCACAATGA  949
      |||||||||||||||| |||||||||| ||||||||||||||||| ||||
seq2  ATTAAAGTGAACAGCC-TTATGATTAC-ATATTAAAGTTATTCAC-ATGA  946

seq1  TCACTATTAATTATATTGTTCAGATATAGCGAATTATACTATATGCTCAC  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCACTATTAATTATATTGTTCAGATATAGCG-ATTATACTATATGCTCAC  995

seq1  TTAGCCTTTACGTTTCTTAAACGATTTCATGTAAACCAGAAAAATGAATG  1049
      |||||||||||||||| ||||||| |||||||||| ||| ||||||||||
seq2  TTAGCCTTTACGTTTC-TAAACGA-TTCATGTAAA-CAG-AAAATGAATG  1041

seq1  TGAGTTTGCAATCGTATGATTAGGTGTTTTGTTTTTCATTTCCTTCCAGA  1099
      ||||||||| |||| |||||||||||||||||||||||||||  ||| ||
seq2  TGAGTTTGC-ATCGGATGATTAGGTGTTTTGTTTTTCATTTC--TCC-GA  1087

seq1  TGAATAGTGACTATAACACACAGACTTGTGTAAGTAATATCACTGATATT  1149
      |||||| |||||||||||| |||||||||||| |||  |||||||  |||
seq2  TGAATA-TGACTATAACAC-CAGACTTGTGTAGGTA--ATCACTGTAATT  1133

seq1  GTTGGGACAGAAAGATATTGCAA  1172
      ||| ||||||||||| |||||||
seq2  GTT-GGACAGAAAGAAATTGCAA  1155

seq1: chr14_99629417_99630462
seq2: B6Ng01-117E12.g_70_1091 (reverse)

seq1  TTTGTCTTGTTTTTTGTTCTTCTTTCTTGGAGGAGAGGCGCGGGAGGGGT  50
      |||||||   ||||||||||   ||||  ||||||||   ||||||||  
seq2  TTTGTCT--GTTTTTGTTCT--CTTCT--GAGGAGAG--CCGGGAGGG--  40

seq1  ATCTTTTTGCAGGTCAGGGTGGGGCTCTGAACAGGGTTCTGGCACTGCCC  100
       |  ||||||| ||||||   ||||||||||||  | ||| |||||||||
seq2  -TTCTTTTGCA-GTCAGG--TGGGCTCTGAACA--GATCT-GCACTGCCC  83

seq1  CAGAGATACATCCGCAGGCCCACACAGAGTTCAGAGTTTTTTCCCGTGT-  149
      ||||||||||| |||| ||||||||  ||||||||| |||||||||||| 
seq2  CAGAGATACAT-CGCA-GCCCACACCAAGTTCAGAG-TTTTTCCCGTGTA  130

seq1  AAAGGTCTGTGAATTCATGACAGAGGATACTCAAGGGATAAATATATCTT  199
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAGGTCTGTGAATTCATGACAGAGGATACTCAAGGGATAAATATATC-T  179

seq1  GAGCAGTTATAAATTCTTCTTTTAAGCTCTTTTAAATGTTTTCAAGTCAA  249
      |||||| |||||||||||||||||||||| |||||||||||   ||||||
seq2  GAGCAG-TATAAATTCTTCTTTTAAGCTC-TTTAAATGTTT--CAGTCAA  225

seq1  GGATATTGTACTGAGTACCCTATTAGAGAGCAGTTACAGAATGTTCCAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGTACTGAGTACCCTATTAGAGAGCAGTTACAGAATGTTCCAAC  275

seq1  CAAGTGTACCTGGAATACAGAGACAGCTCAAAGTCAGGCTCTAAGTTACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTACCTGGAATACAGAGACAGCTCAAAGTCAGGCTCTAAGTTACC  325

seq1  CCTCCATGCCTCTTGCTTATTCCATCTAAAACTCAAAAGAAGAATCTTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATGCCTCTTGCTTATTCCATCTAAAACTCAAAAGAAGAATCTTTT  375

seq1  TGTTTACAGCGGTGACATGGGCCTGTAACCCTCGCTACTCAGACAAGAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGCGGTGACATGGGCCTGTAACCCTCGCTACTCAGACAAGAGG  425

seq1  GTTGCATGGATTGCAGCCTGAGCAACTTTGTTAAAGCTTACACCGCAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCATGGATTGCAGCCTGAGCAACTTTGTTAAAGCTTACACCGCAATG  475

seq1  CAGAGTACTTGTCTAGTGTGCACAAAGCCCTCATTCAACCCCTAGCACAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACTTGTCTAGTGTGCACAAAGCCCTCATTCAACCCCTAGCACAC  525

seq1  CGCAAAAGCATAATGTAAAACCAACTGGAGATTAAAGGGAGGCAGAGGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAAAGCATAATGTAAAACCAACTGGAGATTAAAGGGAGGCAGAGGCA  575

seq1  GGTGATTTCTGAGTTTAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTCTGAGTTTAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGA  625

seq1  CAGCCAGGGCTACACAGAGAAACCCTGTCTCGGAAAAAAACAAAAAACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGGCTACACAGAGAAACCCTGTCTCGGAAAAAAACAAAAAACAA  675

seq1  AAACAAACACCTGAAAAAGATCCCTCCCCGCCCCCAATAGCCATCTTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACACCTGAAAAAGATCCCTCCCCGCCCCCAATAGCCATCTTTTC  725

seq1  TAAAGAGTAGTTGATATTTAGGGGCTAGGAAGCTGGTTTCATCAGTAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGTAGTTGATATTTAGGGGCTAGGAAGCTGGTTTCATCAGTAAAA  775

seq1  TGCTTCCTTCTGAGAATGAGGGTGTGAGTTCAGTCGCTCGCACCTGACTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTTCTGAGAATGAGGGTGTGAGTTCAGTCGCTCGCACCTGACTA  825

seq1  GAAAGCCAAGTGGTTGCTCGCCGTCCTGCCTGGCTGGATACAGCATGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCAAGTGGTTGCTCGCCGTCCTGCCTGGCTGGATACAGCATGTTT  875

seq1  CTGTTTCTGTCTTACCATACAGTCCCTGCGCCTTCACTCACTGCATGTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTGTCTTACCATACAGTCCCTGCGCCTTCACTCACTGCATGTGG  925

seq1  GCCTCCTAGAGCTGTGTGGTGCTAATTCCCACTTCACAGGAGCAGCGCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTAGAGCTGTGTGGTGCTAATTCCCACTTCACAGGAGCAGCGCTT  975

seq1  CTCCATTTCCAGTCTGTGCAGGGTTAACTCACCTTGAGATTGAATTC  1046
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTCCAGTCTGTGCAGGGTTAACTCACCTTGAGATTGAATTC  1022