BAC Information

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BAC

Clone NameB6Ng01-118A01
Chromosome14 (Build37)
Map Location 108,796,376 - 108,797,314
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118A01.bB6Ng01-118A01.g
ACCDH922597DH922598
length1,115939
definitionDH922597|Mus musculus domesticus DNA, BAC clone: B6Ng01-118A01, 5' end.DH922598|Mus musculus domesticus DNA, BAC clone: B6Ng01-118A01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttaggtctgtacaccatattttaatggggttatttgaat
ttctggagttcagcctattaaacttatatatattggatattagtccccta
tcatatttacgattggtaatttttttcccaatctgttgatggcctttttg
tcttattaacagtatcatttgcacaacaattgctttgcaatttcatgagg
taccacttgtcaactcttgatcttacagcacaggccattgctgttctgtt
taggaatttttccctgtacccatttcttccagggttttccccacttcctc
ctctataaatttcagtgtctctggttttatgtggagttccttgatccact
tagacttgagctttgtacaaggagataagaatggatcaattcccattctt
ctacatgataaccaccagatgtgccagcatcatttgtttgaaaatgctgt
cttttttccactggatggtttttagatcccttgtcaaagatcaagtgacc
ataggtgtgtgggttcatatctgggtcttcaattctattccatttatcta
ccagtctgtctctgtaccagtaacatcaagtttttttttttgtttttttt
gttttttgtttttttgttttttgttttttttattacaattgctctgtagt
actggtcgaggtcaggcatggtgattcccccagaggttcttttattgttg
agaatagtttttgctatcgtaggttttttgttattccagatgaatttgca
aattgccctttctaactcagagaattgagttggaattttgatggggattt
aattgaatctgtagattgctttcagcaggatagccatttttactatatta
atcctgccattccatgagcatgggagatcttcttcattttttttcttcag
agacttgaagttcttgtcatacagatctttcacttccttagagtcacacc
aaggtattttatattatttgtgactatgtgaaggtgttatttccctaatt
ctttctcatcttgtttatcctttggtagagatgccactgaattttgagta
ttttatatcagctaagcctctgagctgttttacaggcttaggattttctg
gggattttagggaat
gaattctttgaaaagattaggaggattaagatgtgtgcacttcttggggt
aggtgttgttttgttggaggaggtgttttacttggggggttttggtgttt
ctaaagcagaagctaggcctgtgtcactgtctagcctagggaacatgatg
tagctctcagctacttttccagctcaatgtgtgttgccatactccttgtc
caaatgataatgaattaagtctctgatactgtaagcaagaccccaataaa
atgctttcctccttaagagtttcgtactaatacagcagaacattgactta
aacaattatagtttgatatacaaatatattacgcttacagagccaagtta
aatcttttaaattggttgcttaatactttaatgcaatcaaaaatatctgg
ttaaatattgagaaatattgagaaagatacttaataactactatagtgct
tatttgtaggtgagtttaatttacatccaatataaatatgtcatactatg
gaatttgaaacttttttattctgaaattctttataaataatagtgcagaa
attcaaatatgtgtgtgtacaacggttcgagatgggttctaatgctttga
ttcaattggaatcagcataccaaaatgctaaatgccccttgtccccaact
tggtttttaataggtcactaaagatgccaaaggtgcatgtgaggacacag
aggggaacgaggagattcagcatgacatggggtagaagaatgtgattcag
gagtggcaggaaataagtcaactaaccatgtgagacttaggtaagcagcc
actagggtagcataagatggtttagaaatgaccaggcttttgaagtagcc
aaagcacttaaaactaagtgtgtgtgttgtgtgtgtgctcatttatgcat
ccaaaaaaaagtttctttccctgtacattcatgtgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108796376_108797314
seq2: B6Ng01-118A01.g_67_1005

seq1  GAATTCTTTGAAAAGATTAGGAGGATTAAGATGTGTGCACTTCTTGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAAAGATTAGGAGGATTAAGATGTGTGCACTTCTTGGGGT  50

seq1  AGGTGTTGTTTTGTTGGAGGAGGTGTTTTACTTGGGGGGTTTTGGTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTGTTTTGTTGGAGGAGGTGTTTTACTTGGGGGGTTTTGGTGTTT  100

seq1  CTAAAGCAGAAGCTAGGCCTGTGTCACTGTCTAGCCTAGGGAACATGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCAGAAGCTAGGCCTGTGTCACTGTCTAGCCTAGGGAACATGATG  150

seq1  TAGCTCTCAGCTACTTTTCCAGCTCAATGTGTGTTGCCATACTCCTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTCAGCTACTTTTCCAGCTCAATGTGTGTTGCCATACTCCTTGTC  200

seq1  CAAATGATAATGAATTAAGTCTCTGATACTGTAAGCAAGACCCCAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGATAATGAATTAAGTCTCTGATACTGTAAGCAAGACCCCAATAAA  250

seq1  ATGCTTTCCTCCTTAAGAGTTTCGTACTAATACAGCAGAACATTGACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCCTCCTTAAGAGTTTCGTACTAATACAGCAGAACATTGACTTA  300

seq1  AACAATTATAGTTTGATATACAAATATATTACGCTTACAGAGCCAAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTATAGTTTGATATACAAATATATTACGCTTACAGAGCCAAGTTA  350

seq1  AATCTTTTAAATTGGTTGCTTAATACTTTAATGCAATCAAAAATATCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTAAATTGGTTGCTTAATACTTTAATGCAATCAAAAATATCTGG  400

seq1  TTAAATATTGAGAAATATTGAGAAAGATACTTAATAACTACTATAGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATTGAGAAATATTGAGAAAGATACTTAATAACTACTATAGTGCT  450

seq1  TATTTGTAGGTGAGTTTAATTTACATCCAATATAAATATGTCATACTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAGGTGAGTTTAATTTACATCCAATATAAATATGTCATACTATG  500

seq1  GAATTTGAAACTTTTTTATTCTGAAATTCTTTATAAATAATAGTGCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAAACTTTTTTATTCTGAAATTCTTTATAAATAATAGTGCAGAA  550

seq1  ATTCAAATATGTGTGTGTACAACGGTTCGAGATGGGTTCTAATGCTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATATGTGTGTGTACAACGGTTCGAGATGGGTTCTAATGCTTTGA  600

seq1  TTCAATTGGAATCAGCATACCAAAATGCTAAATG-CCCTTGTCCCCAAC-  648
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TTCAATTGGAATCAGCATACCAAAATGCTAAATGCCCCTTGTCCCCAACT  650

seq1  TGGTTTTTAATAGGTCACTAAAGATGCCAAAGGTGCAGGTGAGGACACAG  698
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGTTTTTAATAGGTCACTAAAGATGCCAAAGGTGCATGTGAGGACACAG  700

seq1  AGGGGAACGAGGAGATTCAGCATGACATGGGGTAGAAGAATGTGATGCAG  748
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGGGAACGAGGAGATTCAGCATGACATGGGGTAGAAGAATGTGATTCAG  750

seq1  GAGTGGCAGGAAATAAAGTCAACCAACCATGTGAGACTTAGGTAAGCAGC  798
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  GAGTGGCAGGAAAT-AAGTCAACTAACCATGTGAGACTTAGGTAAGCAGC  799

seq1  CACTAGGGTAGCAGAAGAAGGTTTAGAAGTGACCAGGC-TTTGAGGTAGC  847
      ||||||||||||| |||| ||||||||| ||||||||| ||||| |||||
seq2  CACTAGGGTAGCATAAGATGGTTTAGAAATGACCAGGCTTTTGAAGTAGC  849

seq1  CAAAGCACTTAAAACTAAGTGTGTGTGTTTGTGTGTGTGCTTCATTTATG  897
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  CAAAGCACTTAAAACTAAGTGTGTGTG-TTGTGTGTGTGC-TCATTTATG  897

seq1  CATCCAAAAAAAAGTTCCTTCCCTGGTACACTCATGTGATAT  939
      |||||||||||||||| ||| ||  ||||| |||||||||||
seq2  CATCCAAAAAAAAGTTTCTTTCCCTGTACATTCATGTGATAT  939