BAC Information

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BAC

Clone NameB6Ng01-118K02
Chromosome14 (Build37)
Map Location 114,019,169 - 114,020,308
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510
Downstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118K02.bB6Ng01-118K02.g
ACCDH923057DH923058
length1,2401,121
definitionDH923057|Mus musculus domesticus DNA, BAC clone: B6Ng01-118K02, 5' end.DH923058|Mus musculus domesticus DNA, BAC clone: B6Ng01-118K02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttattttgctctgtatcccatttattaataggtttatttggtt
ctctggagtctacattcttgagttctttttatatattgatattagccctt
atcacatttagggttggtaacgaactttcccaatctgttggttgcattct
tgtcttaatgatagtgtatttttccttacaaattctttgcaaatttatga
ggtcccattggtcgattcttgatcttaaaggacaagccattggtgttctg
ttcaggatttttcccctgtgctcatatgttcaaggctcttccccactttc
tcctcaataagtttcagtgtccctagttttatgtggagttccttgataca
cttggacttgagctttttacaagaatataagaatggatcgatttgcattc
ttctacatgataactgccagttgagccagcgccatttgatgaaaatgctg
tctttttccccccactggatggttgtagctcctttgtcaaagattaagtg
aacataggtctgtggattgatttctgagtctacaattctatcctattgat
ctacctgcctaacactgcatcaattgcatgctgatataatcacaatttct
ctgtagtacagcttgaggtcagggatgctgattccaccagaatttctttc
attgttgagagtagttttcaatatcctagttttttttattattccaaatg
aatttgtaaatttctctttttaactctgtcttgcgcgcgctcaactggcc
aggaagaacgacgctgctacaggatccttctgcacacatttattcagtcc
tgtttcttctttctccatatatctcccttgtttatatctcccttgtttat
atctcccctgtttatatctcccttgtttttatatctcccttgaaccctgg
gcctctcactcttttatactctcagttcccatccacgcacagcaggccac
gctacctcaccaggcacgcagcttcagctaatcagggcagcagggcatat
ctccatcaaattggattcacctgtatcctgtacacttgcgcagcactcaa
gatgttttgtgtcttattgagagtcagttcagtcatatgacttagctgca
gtccttggcgcccttgggactgccgcacaccgattcccaaattcccgttt
tttcttttttggcaagaatgttcgtggaatagctctctcaggctatgtac
tcttacccgcgttctttgtgtgggagagaacaaactacgt
gaattcattactgagccagctcacctcaattgtttaattctcagaatgtg
tctttctcaaaagctcttggtcgctttcaacatggaaagtacttcctaat
caaaatgacaattaaataaaataggtcaaggtgacacttcaccttcaggg
agaataagtaagctggagtaaatgtgaaaatgtggtatgacatgatgtta
gcccaggaatgtagggacaactcataaacatttcagtagaaagttagcaa
atttctagaagttgttactcatatttgaatcctgccgtttgtataacagc
agatatattataatggctgcataaataagcacctgacaccaaacattttc
tatgctattcctctcgcagttctgtgagcatggcagagctaagctgaact
tttacatacagcctttgctgggctcaatagtctatgtgactactgtcatg
gtattgagccttgaagaacaaaatcctactaaagataaaatgaaacagga
attctcagatgcggtatattggtatcaactaataataggtttcaaagaaa
cctattttccattgtttcaaggaaacacatttttatctgccacctgtcaa
ccatcaatattagctgtctttcaatgtacattctcttgaatataagaagc
cagaaaacttgtctttcttacttagtgaaagagtgatttgacagacctgt
gagtaagccaaaaatgacctggtggatccccctgcacttcctgactcttg
tcatgatttttggtccattttgactgtgatgttcacccaggtaaataggt
tgaattggattttctgtgattctaacagactacctttataatagacataa
gaaaaaattgatacccaacaaaactgggaaagtcttcctagacatctccc
acccttaatccaaactgggcactagactctcagagaggaggagggcataa
gaaatgcctcggtggtaagagtacttattcaggaggactccagatgatca
aatgcccaatttaaatgattcaaatcatctggattcagcttctagaaggt
gataccctgtttcatactgcaggcattgcccatatatagtacaagaaata
tggccaatacaataacaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114019169_114020308
seq2: B6Ng01-118K02.g_67_1187 (reverse)

seq1  ATTTTGTTTATTTGTATTTGTGCATATTTTCTTGTATACTATATTAATGT  50
      ||||||||   ||||| |||  |||| |||||||  ||||||||  ||| 
seq2  ATTTTGTT--ATTGTA-TTGGCCATA-TTTCTTG--TACTATAT--ATGG  42

seq1  GCAAATGCCTGCAGTATTGGAAACAGGGTATCACTTCCTAGAAGGCTGGA  100
      || ||||||||||||||  ||||||||||||||| | |||||| ||||  
seq2  GC-AATGCCTGCAGTAT--GAAACAGGGTATCACCTTCTAGAA-GCTG--  86

seq1  ATTCCAGATGATTTGAATCATTTAAATTGGGCATTTGGATCAATCTGGAG  150
      | |||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  AATCCAGATGATTTGAATCATTTAAATTGGGCATTT-GATC-ATCTGGAG  134

seq1  TCTTCCTGAATAAGTACTCTTAACCACCGAGGCATTTCTTTATGCCCTCC  200
      || |||||||||||||||||| |||||||||||||||| |||||||||||
seq2  TCCTCCTGAATAAGTACTCTT-ACCACCGAGGCATTTC-TTATGCCCTCC  182

seq1  TCCTCTCTTGAGAGTCTAGTGCCCAGTTTGGATTAAGGGTGGGAGATGTC  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTC-TGAGAGTCTAGTGCCCAGTTTGGATTAAGGGTGGGAGATGTC  231

seq1  TAGGAAGACTTTCCCAGTTTTGTTGGGTATCAATTTTTTCTTATGTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGACTTTCCCAGTTTTGTTGGGTATCAATTTTTTCTTATGTCTAT  281

seq1  TATAAAGGTAGTCTGTTAGAATCACAGAAAATCCAATTCAACCTATTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGTAGTCTGTTAGAATCACAGAAAATCCAATTCAACCTATTTAC  331

seq1  CTGGGTGAACATCACAGTCAAAATGGACCAAAAATCATGACAAGAGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGAACATCACAGTCAAAATGGACCAAAAATCATGACAAGAGTCAG  381

seq1  GAAGTGCAGGGGGATCCACCAGGTCATTTTTGGCTTACTCACAGGTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCAGGGGGATCCACCAGGTCATTTTTGGCTTACTCACAGGTCTGT  431

seq1  CAAATCACTCTTTCACTAAGTAAGAAAGACAAGTTTTCTGGCTTCTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACTCTTTCACTAAGTAAGAAAGACAAGTTTTCTGGCTTCTTATA  481

seq1  TTCAAGAGAATGTACATTGAAAGACAGCTAATATTGATGGTTGACAGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAGAATGTACATTGAAAGACAGCTAATATTGATGGTTGACAGGTG  531

seq1  GCAGATAAAAATGTGTTTCCTTGAAACAATGGAAAATAGGTTTCTTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAAAAATGTGTTTCCTTGAAACAATGGAAAATAGGTTTCTTTGAA  581

seq1  ACCTATTATTAGTTGATACCAATATACCGCATCTGAGAATTCCTGTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATTATTAGTTGATACCAATATACCGCATCTGAGAATTCCTGTTTCA  631

seq1  TTTTATCTTTAGTAGGATTTTGTTCTTCAAGGCTCAATACCATGACAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTTTAGTAGGATTTTGTTCTTCAAGGCTCAATACCATGACAGTA  681

seq1  GTCACATAGACTATTGAGCCCAGCAAAGGCTGTATGTAAAAGTTCAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATAGACTATTGAGCCCAGCAAAGGCTGTATGTAAAAGTTCAGCTT  731

seq1  AGCTCTGCCATGCTCACAGAACTGCGAGAGGAATAGCATAGAAAATGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGCCATGCTCACAGAACTGCGAGAGGAATAGCATAGAAAATGTTT  781

seq1  GGTGTCAGGTGCTTATTTATGCAGCCATTATAATATATCTGCTGTTATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAGGTGCTTATTTATGCAGCCATTATAATATATCTGCTGTTATAC  831

seq1  AAACGGCAGGATTCAAATATGAGTAACAACTTCTAGAAATTTGCTAACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGCAGGATTCAAATATGAGTAACAACTTCTAGAAATTTGCTAACTT  881

seq1  TCTACTGAAATGTTTATGAGTTGTCCCTACATTCCTGGGCTAACATCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGAAATGTTTATGAGTTGTCCCTACATTCCTGGGCTAACATCATG  931

seq1  TCATACCACATTTTCACATTTACTCCAGCTTACTTATTCTCCCTGAAGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCACATTTTCACATTTACTCCAGCTTACTTATTCTCCCTGAAGGT  981

seq1  GAAGTGTCACCTTGACCTATTTTATTTAATTGTCATTTTGATTAGGAAGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTCACCTTGACCTATTTTATTTAATTGTCATTTTGATTAGGAAGT  1031

seq1  ACTTTCCATGTTGAAAGCGACCAAGAGCTTTTGAGAAAGACACATTCTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCATGTTGAAAGCGACCAAGAGCTTTTGAGAAAGACACATTCTGA  1081

seq1  GAATTAAACAATTGAGGTGAGCTGGCTCAGTAATGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAACAATTGAGGTGAGCTGGCTCAGTAATGAATTC  1121