BAC Information

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BAC

Clone NameB6Ng01-119B08
Chromosome14 (Build37)
Map Location 97,223,830 - 97,356,423
singlet/doubletdoublet
Overlap geneLOC668654
Upstream gene4921530L21Rik, Klhl1, LOC100043366
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119B08.bB6Ng01-119B08.g
ACCDH923389DH923390
length1,0921,095
definitionDH923389|Mus musculus domesticus DNA, BAC clone: B6Ng01-119B08, 5' end.DH923390|Mus musculus domesticus DNA, BAC clone: B6Ng01-119B08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,223,830 - 97,224,939)(97,355,309 - 97,356,423)
sequence
gaattctaaataaagtagatttagaaaaaatctaagccaacaagcaacta
aatattttagaaggtaggtttgtaaatttttaacattacacagtgtttat
gcacatgtgtcaaaacatcaaatggtgcccaattgatgcagtaatgattt
atgtaccattataaatacattttgttaactttaaaagaagaattttcatc
atcatgatggctgcattgttgatatctatacatcaatataagaaactgta
gaaagagttctgagagactgagtcacttgccttatgtttctcctgatatt
aaattataaaatatataaccaaatcaagtctaatgtcacagtgaattttc
cattgagtcagactagatgattaaattaattttctgtccatgaaaacgct
ctgcatatttagattactagaaaatagatacctgtattctgtccctttat
tcatcacacactgaaacacttaaccaaataacaattataaatgaaaaata
ttagtaattattcaatcatattattcttttagtttgcacattatcctctg
tttaggaagatggtaattaattcctacctatttttattacattcacaatg
acttttcaagctggttgttcccaccaagctgttgatagcattctgtgctg
ccttacacttgggaatgtgctattgtctacaatttaattaccgagttatc
acacatttcccacacatatgcttataaattgaatatgttgtcaatcattc
attttcctcctgctaaaaatatatctatttctaccatatgttggtgaaat
aatttttcttttttattggctttaggattttaggaagttgtctgtattgt
ttgtcattgtttgcaaacacattgaaaatgctatttgtcatttgtacaaa
atatcagaacagccttctggtgacagctcttttttttcaaggaaacaata
tttaaaaatgatggagggaagagaatatacttttgctagtttcctttttt
ctaatgatttcattcacagttttattaaaaacatacacactatgacttaa
gcacccttactgctcagcagttagcccagtatcataaatgta
gaattcttgcttctgttaaagttgaaatcaagttgaatacattaagaacc
ttgagaacatagattaatatattgtgcaaatacatacatgattattaaac
tattagtacactgaaatgtgtaacaccaaagatggagaaaaaaatgttaa
aagaaactaatactaacattcagtagtgaggaacctcataattactaaat
atttgttttttaggtattttctttgaatataatcccatgacaatatactt
tttcttatcaataaattatttttaaaaaattaagatactcataaaacatt
taaggaaagaaatctttctgcattttattgatagttgtatcagttgcatc
ttatctttttctaagtacataacttatctgacatgtacggtatttttatg
gaaatcttcagttcttcaacactcttgatttaagttctaccagcccacac
tttcgctaacgtcaaataatgacttccggatgcctttcctaatttgcatg
atgatattgatatgtcaggtcctccttgaatactgatctgtcagtcaaac
tctttatcttgaatataatatctaactcccacagtatagaaagctgtcca
tttatctaggagagtcccgggacagcaagcatatagcctgtcctggatga
cattctttccttaatatataactcatgtctttggacttgtcaggtaattt
gaaaggaaacgtatccccatatatctttttcattcaaattacggttgtcc
gtcttctcactattcctgtctgtactctgccagttatcttttagaattct
ttcagcttgtaaaattaacctagcaccaagcctagaaagttagctattat
actagttctttaaatttaacccgaactatcacacccattcccatagcttg
gcatgtgaggtgagttcacaaacaaaattgttaactatcctggaaattgg
agtagcacatccttacttgatagaatgtttgtactgctaatgaaagagtc
agtgtgtaggcacagctctgctgtttgtaagaagcagatcttgtcaaaga
gtagagcagtttctgatgtaagctgcggcgttagtaggcagaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97223830_97224939
seq2: B6Ng01-119B08.b_46_1137

seq1  GAATTCTAAATAAAGTAGATTTAGAAAAAATCTAAGCCAACAAGCAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAATAAAGTAGATTTAGAAAAAATCTAAGCCAACAAGCAACTA  50

seq1  AATATTTTAGAAGGTAGGTTTGTAAATTTTTAACATTACACAGTGTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTAGAAGGTAGGTTTGTAAATTTTTAACATTACACAGTGTTTAT  100

seq1  GCACATGTGTCAAAACATCAAATGGTGCCCAATTGATGCAGTAATGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGTGTCAAAACATCAAATGGTGCCCAATTGATGCAGTAATGATTT  150

seq1  ATGTACCATTATAAATACATTTTGTTAACTTTAAAAGAAGAATTTTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCATTATAAATACATTTTGTTAACTTTAAAAGAAGAATTTTCATC  200

seq1  ATCATGATGGCTGCATTGTTGATATCTATACATCAATATAAGAAACTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATGGCTGCATTGTTGATATCTATACATCAATATAAGAAACTGTA  250

seq1  GAAAGAGTTCTGAGAGACTGAGTCACTTGCCTTATGTTTCTCCTGATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTTCTGAGAGACTGAGTCACTTGCCTTATGTTTCTCCTGATATT  300

seq1  AAATTATAAAATATATAACCAAATCAAGTCTAATGTCACAGTGAATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAAAATATATAACCAAATCAAGTCTAATGTCACAGTGAATTTTC  350

seq1  CATTGAGTCAGACTAGATGATTAAATTAATTTTCTGTCCATGAAAACGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGTCAGACTAGATGATTAAATTAATTTTCTGTCCATGAAAACGCT  400

seq1  CTGCATATTTAGATTACTAGAAAATAGATACCTGTATTCTGTCCCTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATATTTAGATTACTAGAAAATAGATACCTGTATTCTGTCCCTTTAT  450

seq1  TCATCACACACTGAAACACTTAACCAAATAACAATTATAAATGAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACACACTGAAACACTTAACCAAATAACAATTATAAATGAAAAATA  500

seq1  TTAGTAATTATTCAATCATATTATTCTTTTAGTTTGCACATTATCCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAATTATTCAATCATATTATTCTTTTAGTTTGCACATTATCCTCTG  550

seq1  TTTAGGAAGATGGTAATTAATTCCTACCTATTTTTATTACATTCACAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAAGATGGTAATTAATTCCTACCTATTTTTATTACATTCACAATG  600

seq1  ACTTTTCAAGCTGGTTGTTCCCACCAAGCTGTTGATAGCATTCTGTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCAAGCTGGTTGTTCCCACCAAGCTGTTGATAGCATTCTGTGCTG  650

seq1  CCTTACACTTGGGAATGTGCTATTGTCTACAATTTAATTACCGAGTTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACACTTGGGAATGTGCTATTGTCTACAATTTAATTACCGAGTTATC  700

seq1  ACACATTTCCCACACATATGCTTATAAATTGAATATGTTGTCAATCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTCCCACACATATGCTTATAAATTGAATATGTTGTCAATCATTC  750

seq1  ATTTTCCTCCTGCTAAAAATATATCTATTTCTACCATATGTTGGTGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTCCTGCTAAAAATATATCTATTTCTACCATATGTTGGTGAAAT  800

seq1  AATTTTTCTTTTTTATTGGCTTTAGGATTTTAGGAAGTTGTCTGTATTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTTTTTTATTGGCTTTAGGATTTTAGGAAGTTGTCTGTATTGT  850

seq1  TTGTCATTGTTTGCAAACACATTGAAAATGCTATTTGTCATTTGTACAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTGTTTGCAAACACATTGAAAATGCTATTTGTCATTTGTACAAA  900

seq1  ATATCAGAACAGCCTTCTGGTGACAAGCTCTTTTTTTTCAAGGAAACAAT  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATATCAGAACAGCCTTCTGGTGAC-AGCTCTTTTTTTTCAAGGAAACAAT  949

seq1  AATTTAAAAATGATGGAGGGAAGAGAATATTAACTTTTGCTAAGTTTCCT  1000
       |||||||||||||||||||||||||||||  ||||||||| ||||||||
seq2  -ATTTAAAAATGATGGAGGGAAGAGAATAT--ACTTTTGCT-AGTTTCCT  995

seq1  TTTTTCTAATGATTTTCATTCACAGTTTTATTAAAAACATACACACTATT  1050
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  TTTTTCTAATGA-TTTCATTCACAGTTTTATTAAAAACATACACACTA-T  1043

seq1  GACTTTAAAGCACCCCTAACCTGCTCAGGCAAGTTTAAGCCCAGTATTCT  1100
      |||||  |||||||| ||  ||||||||   ||||  ||||||||||  |
seq2  GACTT--AAGCACCCTTA--CTGCTCAG--CAGTT--AGCCCAGTATCAT  1085

seq1  ATAAAATGTA  1110
         |||||||
seq2  ---AAATGTA  1092

seq1: chr14_97355309_97356423
seq2: B6Ng01-119B08.g_69_1163 (reverse)

seq1  ACTTCTGCCCTACTAAACGCCGCAGCTTAACATTCAGGAAACTGCTCCTA  50
      ||||||| |||||| ||||||||||||| ||| ||| ||||||||| |||
seq2  ACTTCTG-CCTACT-AACGCCGCAGCTT-ACA-TCA-GAAACTGCT-CTA  44

seq1  CCTCTTTTGACAAGATCCTGCTTCTTTAACAAACCAAGCAAGAGCCTGTG  100
       ||| ||||||||||| |||||||||  ||||||  ||| |||| |||||
seq2  -CTC-TTTGACAAGAT-CTGCTTCTT--ACAAAC--AGC-AGAG-CTGTG  85

seq1  CCCTACACACTGACTCCTTTCATTAGCAGTACAAACATTTCTATCAAGTA  150
       |||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  -CCTACACACTGACT-CTTTCATTAGCAGTACAAACA-TTCTATCAAGTA  132

seq1  AGGATGTGCTTACTCCAATTTCCAGGATAGTTAACAATTTTGTTTGTGAA  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGC-TACTCCAATTTCCAGGATAGTTAACAATTTTGTTTGTGAA  181

seq1  CTCACCTCACATGCCAAGCTATGGGAATGGGTGTGATAGTTCGGGTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTCACCTCACATGCCAAGCTATGGGAATGGGTGTGATAGTTCGGGTTAA-  230

seq1  ATTTAAAGAACTAGTATAATAGCTAACTTTCTAGGCTTGGTGCTAGGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGAACTAGTATAATAGCTAACTTTCTAGGCTTGGTGCTAGGTTA  280

seq1  ATTTTACAAGCTGAAAGAATTCTAAAAGATAACTGGCAGAGTACAGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACAAGCTGAAAGAATTCTAAAAGATAACTGGCAGAGTACAGACAG  330

seq1  GAATAGTGAGAAGACGGACAACCGTAATTTGAATGAAAAAGATATATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTGAGAAGACGGACAACCGTAATTTGAATGAAAAAGATATATGGG  380

seq1  GATACGTTTCCTTTCAAATTACCTGACAAGTCCAAAGACATGAGTTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACGTTTCCTTTCAAATTACCTGACAAGTCCAAAGACATGAGTTATAT  430

seq1  ATTAAGGAAAGAATGTCATCCAGGACAGGCTATATGCTTGCTGTCCCGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGAAAGAATGTCATCCAGGACAGGCTATATGCTTGCTGTCCCGGG  480

seq1  ACTCTCCTAGATAAATGGACAGCTTTCTATACTGTGGGAGTTAGATATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCTAGATAAATGGACAGCTTTCTATACTGTGGGAGTTAGATATTA  530

seq1  TATTCAAGATAAAGAGTTTGACTGACAGATCAGTATTCAAGGAGGACCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAGATAAAGAGTTTGACTGACAGATCAGTATTCAAGGAGGACCTG  580

seq1  ACATATCAATATCATCATGCAAATTAGGAAAGGCATCCGGAAGTCATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCAATATCATCATGCAAATTAGGAAAGGCATCCGGAAGTCATTAT  630

seq1  TTGACGTTAGCGAAAGTGTGGGCTGGTAGAACTTAAATCAAGAGTGTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACGTTAGCGAAAGTGTGGGCTGGTAGAACTTAAATCAAGAGTGTTGA  680

seq1  AGAACTGAAGATTTCCATAAAAATACCGTACATGTCAGATAAGTTATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGAAGATTTCCATAAAAATACCGTACATGTCAGATAAGTTATGTA  730

seq1  CTTAGAAAAAGATAAGATGCAACTGATACAACTATCAATAAAATGCAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAAAAGATAAGATGCAACTGATACAACTATCAATAAAATGCAGAA  780

seq1  AGATTTCTTTCCTTAAATGTTTTATGAGTATCTTAATTTTTTAAAAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTTTCCTTAAATGTTTTATGAGTATCTTAATTTTTTAAAAATAA  830

seq1  TTTATTGATAAGAAAAAGTATATTGTCATGGGATTATATTCAAAGAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGATAAGAAAAAGTATATTGTCATGGGATTATATTCAAAGAAAAT  880

seq1  ACCTAAAAAACAAATATTTAGTAATTATGAGGTTCCTCACTACTGAATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAAAACAAATATTTAGTAATTATGAGGTTCCTCACTACTGAATGT  930

seq1  TAGTATTAGTTTCTTTTAACATTTTTTTCTCCATCTTTGGTGTTACACAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTAGTTTCTTTTAACATTTTTTTCTCCATCTTTGGTGTTACACAT  980

seq1  TTCAGTGTACTAATAGTTTAATAATCATGTATGTATTTGCACAATATATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTACTAATAGTTTAATAATCATGTATGTATTTGCACAATATATT  1030

seq1  AATCTATGTTCTCAAGGTTCTTAATGTATTCAACTTGATTTCAACTTTAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATGTTCTCAAGGTTCTTAATGTATTCAACTTGATTTCAACTTTAA  1080

seq1  CAGAAGCAAGAATTC  1115
      |||||||||||||||
seq2  CAGAAGCAAGAATTC  1095