BAC Information

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BAC

Clone NameB6Ng01-119D24
Chromosome14 (Build37)
Map Location 68,966,835 - 69,145,769
singlet/doubletdoublet
Overlap geneAdam7
Upstream geneEbf2, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072
Downstream geneAdamdec1, Adam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119D24.bB6Ng01-119D24.g
ACCDH923515DH923516
length1,1571,024
definitionDH923515|Mus musculus domesticus DNA, BAC clone: B6Ng01-119D24, 5' end.DH923516|Mus musculus domesticus DNA, BAC clone: B6Ng01-119D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,144,600 - 69,145,769)(68,966,835 - 68,967,839)
sequence
gaattcctcagttcaaattacagtgaaacatactacaacgtaaagagaga
agtgttcaccaagcatccacagatcttggtatcttacaaaaccttacttt
gtctcctctctgaaacttttatttcctggtatgattttaaacagtaatgg
cagatttacaagctatttcaaaacttctttaaaagaactagccctgagtt
gactagtctacataaatggcagtagaatggaaaacagtgccctttgagcc
ctaaggagagctaatcacttcctagtgagcagattgaaggttacatcata
ttattactattttatttacttatttatttttgctaatctggcttctcttt
attcattatagtggtaagtgaaagaagcacaaagcaggagtccaaacaaa
catattataccttgatggagttttacttaagtaaaagggataaaatctaa
atatatgaaacaagatctacaatgaactggctcctatatggcgtaggagc
tctgtctacccttctgataaactcacatttaggattttattcttcattct
gcaaaggaagctttgcatgactgatattctagaaatacagaatctttctt
ttctttcacccttgcagaacttgttttctatggccattaagcaaaagcac
cccttctgaccaaaagtattctttaaaactttacttcctctatttaaaat
gactttaaatgacaattagatctaagccaccatgttgtcttaagatagag
gaaaagagcaacaggtgggaggccttagaaggccatagaagtgtcgcctc
tgggttcattagcagacagaagaaataaggattgcctgatgtaattacta
tgagcagtgcaccaagcaggaacaataaatatgccagctggatcgaaaca
gagaaacaagagagacagacctaaaggggaggtggctggagagcaggtct
aattctaaaacatccaaagtttgccttggtttaacaggctgtggggggat
gacatacttcatcaagattagcagatggagaagagtcaaagtcaagtaca
agagagggttcccatctgaaagtggatactgtggccaatagacaatttat
gaagagatttattaggcattacacggaagtagtcatagttaggaataaaa
gtcccca
gaattctttgagctgtattaagctaaagcaagagtggctggggagatggc
tcaatggttaagaacactttttgttcttgtagaggacccaggttcagtac
ccagcatccatatggtggctcacaaccaaccataactcctccagggacct
ggtgttttcttctagcctcttcagctgccatccatgcatgtagtgcacac
atgaacctgcagacaaaacacgtatacacataaaaagtaagtaaatcttt
gaaagatgaattacaaaaaaaaaaaaaaacttgaagcaaagcaaatgact
taggaagggcattgggcatgatacacgatgcaaagttgtaagtagtttgg
gagaaaatggtagaggtaggaattgagaccagtcagcatttatgtacaaa
gctcttaggacaagaatgtccattttctttttgtcccagcatctacagag
aaggaccccatgttggaggggaatggaaagcagcaccttctataaaagtg
aaggcttcattcggaatatccaagatacaactcacaaaccacaggaagct
caagaagaaggaagaccaaagtgtggatacttcgatccttcttagaaggg
ggaacaaaatacccatggaaggagttacagagacaaagtgtagagcagag
actgaaggaaggaccatccagagactgccccacctggggatccatcccat
atacagtcaccaaaccaagatactattgtagaagccagcaagtgcttgtt
gacagaaacctgttatagctgtctctggagaggctccaccagtgcctgac
aaatacagaggtggatgctcgcagccatccattggactgagcacagggtc
cccaatgaaggacctagagaaggacccaaggagcggccccataggaggaa
caacaatatgaactaaccagtaccccagaattcccagggactaaaccatc
atcacaaacaccatggtgggactcatggctctagccgcatatgagcagag
atggcctagtcgtcatcaatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_69144600_69145769
seq2: B6Ng01-119D24.b_46_1202 (reverse)

seq1  TGGGGACTTTTTATCCTAACTTAATGACTACTT-CGTGTAAATGCTTATA  49
      |||||||||||  ||||||||  |||||||||| ||||| ||||| || |
seq2  TGGGGACTTTTATTCCTAACT--ATGACTACTTCCGTGT-AATGCCTA-A  46

seq1  TAAATTCTTTCCTCATAAATTTGTCTATTGGGCCACAGTAT-CACTTTCA  98
      ||||   | || ||||||| ||||||||| ||||||||||| ||||||||
seq2  TAAA---TCTCTTCATAAA-TTGTCTATT-GGCCACAGTATCCACTTTCA  91

seq1  GATGGGACCCTTCTCTTGTAACTTTGACTTTGACTCTTTCTCCATCTGCT  148
      ||||||| || |||||||||   ||||||||||||| |||||||||||||
seq2  GATGGGAACCCTCTCTTGTA--CTTGACTTTGACTC-TTCTCCATCTGCT  138

seq1  AATCCTTGATGAAGTATTGTCATCCCCCCACAGCCTGTTAAACCAAGGCA  198
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAT-CTTGATGAAGTA-TGTCATCCCCCCACAGCCTGTTAAACCAAGGCA  186

seq1  AACTTTGGATGTTTTTAGAATTAGACCCTGCTCTCCAGCCACCTCCCC-T  247
      ||||||||||| ||||||||||||| |||||||||||||||||||||| |
seq2  AACTTTGGATG-TTTTAGAATTAGA-CCTGCTCTCCAGCCACCTCCCCTT  234

seq1  TAGGTCTGTCTCTCTTGTTTCTCTGTTTCGATCCAGCTGGCATATTTATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTGTCTCTCTTGTTTCTCTGTTTCGATCCAGCTGGCATATTTATT  284

seq1  GTTCCTGCTTGGTGCACTGCTCATAGTAATTACATCAGGCAATCCTTATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGCTTGGTGCACTGCTCATAGTAATTACATCAGGCAATCCTTATT  334

seq1  TCTTCTGTCTGCTAATGAACCCAGAGGCGACACTTCTATGGCCTTCTAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTCTGCTAATGAACCCAGAGGCGACACTTCTATGGCCTTCTAAG  384

seq1  GCCTCCCACCTGTTGCTCTTTTCCTCTATCTTAAGACAACATGGTGGCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCACCTGTTGCTCTTTTCCTCTATCTTAAGACAACATGGTGGCTT  434

seq1  AGATCTAATTGTCATTTAAAGTCATTTTAAATAGAGGAAGTAAAGTTTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTAATTGTCATTTAAAGTCATTTTAAATAGAGGAAGTAAAGTTTTA  484

seq1  AAGAATACTTTTGGTCAGAAGGGGTGCTTTTGCTTAATGGCCATAGAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATACTTTTGGTCAGAAGGGGTGCTTTTGCTTAATGGCCATAGAAAA  534

seq1  CAAGTTCTGCAAGGGTGAAAGAAAAGAAAGATTCTGTATTTCTAGAATAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTGCAAGGGTGAAAGAAAAGAAAGATTCTGTATTTCTAGAATAT  584

seq1  CAGTCATGCAAAGCTTCCTTTGCAGAATGAAGAATAAAATCCTAAATGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATGCAAAGCTTCCTTTGCAGAATGAAGAATAAAATCCTAAATGTG  634

seq1  AGTTTATCAGAAGGGTAGACAGAGCTCCTACGCCATATAGGAGCCAGTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATCAGAAGGGTAGACAGAGCTCCTACGCCATATAGGAGCCAGTTC  684

seq1  ATTGTAGATCTTGTTTCATATATTTAGATTTTATCCCTTTTACTTAAGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGATCTTGTTTCATATATTTAGATTTTATCCCTTTTACTTAAGTA  734

seq1  AAACTCCATCAAGGTATAATATGTTTGTTTGGACTCCTGCTTTGTGCTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCATCAAGGTATAATATGTTTGTTTGGACTCCTGCTTTGTGCTTC  784

seq1  TTTCACTTACCACTATAATGAATAAAGAGAAGCCAGATTAGCAAAAATAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTACCACTATAATGAATAAAGAGAAGCCAGATTAGCAAAAATAA  834

seq1  ATAAGTAAATAAAATAGTAATAATATGATGTAACCTTCAATCTGCTCACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAATAAAATAGTAATAATATGATGTAACCTTCAATCTGCTCACT  884

seq1  AGGAAGTGATTAGCTCTCCTTAGGGCTCAAAGGGCACTGTTTTCCATTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGATTAGCTCTCCTTAGGGCTCAAAGGGCACTGTTTTCCATTCT  934

seq1  ACTGCCATTTATGTAGACTAGTCAACTCAGGGCTAGTTCTTTTAAAGAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCATTTATGTAGACTAGTCAACTCAGGGCTAGTTCTTTTAAAGAAG  984

seq1  TTTTGAAATAGCTTGTAAATCTGCCATTACTGTTTAAAATCATACCAGGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATAGCTTGTAAATCTGCCATTACTGTTTAAAATCATACCAGGA  1034

seq1  AATAAAAGTTTCAGAGAGGAGACAAAGTAAGGTTTTGTAAGATACCAAGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGTTTCAGAGAGGAGACAAAGTAAGGTTTTGTAAGATACCAAGA  1084

seq1  TCTGTGGATGCTTGGTGAACACTTCTCTCTTTACGTTGTAGTATGTTTCA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGATGCTTGGTGAACACTTCTCTCTTTACGTTGTAGTATGTTTCA  1134

seq1  CTGTAATTTGAACTGAGGAATTC  1170
      |||||||||||||||||||||||
seq2  CTGTAATTTGAACTGAGGAATTC  1157

seq1: chr14_68966835_68967839
seq2: B6Ng01-119D24.g_68_1067

seq1  GAATTCTTTGAGCTGTATTAAGCTAAAGCAAGAGTGGCTGGGGAGATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAGCTGTATTAAGCTAAAGCAAGAGTGGCTGGGGAGATGGC  50

seq1  TCAATGGTTAAGAACACTTTTTGTTCTTGTAGAGGACCCAGGTTCAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTTAAGAACACTTTTTGTTCTTGTAGAGGACCCAGGTTCAGTAC  100

seq1  CCAGCATCCATATGGTGGCTCACAACCAACCATAACTCCTCCAGGGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATCCATATGGTGGCTCACAACCAACCATAACTCCTCCAGGGACCT  150

seq1  GGTGTTTTCTTCTAGCCTCTTCAGCTGCCATCCATGCATGTAGTGCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTCTTCTAGCCTCTTCAGCTGCCATCCATGCATGTAGTGCACAC  200

seq1  ATGAACCTGCAGACAAAACACGTATACACATAAAAAGTAAGTAAATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCTGCAGACAAAACACGTATACACATAAAAAGTAAGTAAATCTTT  250

seq1  GAAAGATGAATTACAAAAAAAAAAAAAAACTTGAAGCAAAGCAAATGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGAATTACAAAAAAAAAAAAAAACTTGAAGCAAAGCAAATGACT  300

seq1  TAGGAAGGGCATTGGGCATGATACACGATGCAAAGTTGTAAGTAGTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGGGCATTGGGCATGATACACGATGCAAAGTTGTAAGTAGTTTGG  350

seq1  GAGAAAATGGTAGAGGTAGGAATTGAGACCAGTCAGCATTTATGTACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATGGTAGAGGTAGGAATTGAGACCAGTCAGCATTTATGTACAAA  400

seq1  GCTCTTAGGACAAGAATGTCCATTTTCTTTTTGTCCCAGCATCTACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAGGACAAGAATGTCCATTTTCTTTTTGTCCCAGCATCTACAGAG  450

seq1  AAGGACCCCATGTTGGAGGGGAATGGAAAGCAGCACCTTCTATAAAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCCCATGTTGGAGGGGAATGGAAAGCAGCACCTTCTATAAAAGTG  500

seq1  AAGGCTTCATTCGGAATATCCAAGATACAACTCACAAACCACAGGAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTCATTCGGAATATCCAAGATACAACTCACAAACCACAGGAAGCT  550

seq1  CAAGAAGAAGGAAGACCAAAGTGTGGATACTTCGATCCTTCTTAGAAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGAAGGAAGACCAAAGTGTGGATACTTCGATCCTTCTTAGAAGGG  600

seq1  GGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTAGAGCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTAGAGCAGAG  650

seq1  ACTGAAGGAAGGACCATCCAGAGACTGCCCCACCTGGGGATCCATCCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGGAAGGACCATCCAGAGACTGCCCCACCTGGGGATCCATCCCAT  700

seq1  ATACAGTCACCAAACCAAGATACTATTGTAGAAGCCAGCAAGTGCTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTCACCAAACCAAGATACTATTGTAGAAGCCAGCAAGTGCTTGTT  750

seq1  GACAGAAACCTGTTATAGCTGTCTCTGGAGAGGCTCCACCAGTGCCTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAACCTGTTATAGCTGTCTCTGGAGAGGCTCCACCAGTGCCTGAC  800

seq1  AAATACAGAGGTGGATGCTCGCAGCCATCCATTGGACTGAGCACAGGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGAGGTGGATGCTCGCAGCCATCCATTGGACTGAGCACAGGGTC  850

seq1  CCCAATGAAGGACCTAGAGAAAGGACCCAAGGAGCGGCCCCATAGGAGGA  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCCAATGAAGGACCTAGAG-AAGGACCCAAGGAGCGGCCCCATAGGAGGA  899

seq1  ACAACAATATGAACTAACCAGTACCCCCAGAATTCCCAGGGACTAAACCA  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACAACAATATGAACTAACCAGTA-CCCCAGAATTCCCAGGGACTAAACCA  948

seq1  TCAATCAACAAAACACATGGTGGGACTCATGGCTCTAGCCGCATATGGAG  1000
      || ||| |||||   ||||||||||||||||||||||||||||||| |||
seq2  TC-ATC-ACAAACACCATGGTGGGACTCATGGCTCTAGCCGCATAT-GAG  995

seq1  CAGAG  1005
      |||||
seq2  CAGAG  1000