BAC Information

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BAC

Clone NameB6Ng01-119K06
Chromosome14 (Build37)
Map Location 115,850,291 - 115,998,491
singlet/doubletdoublet
Overlap geneGpc5
Upstream geneLOC100043521
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119K06.bB6Ng01-119K06.g
ACCDH923800DH923801
length3811,073
definitionDH923800|Mus musculus domesticus DNA, BAC clone: B6Ng01-119K06, 5' end.DH923801|Mus musculus domesticus DNA, BAC clone: B6Ng01-119K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,998,111 - 115,998,491)(115,850,291 - 115,851,361)
sequence
ataaagaaaataaaattctagagaaaaatttattttcccaaataacaaat
aatagagaacaggactaaggaaatggctcatctggtaaaaagcagaaaaa
aatgcaagcctaaggacccaagttcgaaccctaaaacccatagagcattc
ctatagcaagaggagaggtggagacaggacatttcccagaaccttttccc
atcagcaagcatgatgtacatagcaaagtaccagagatgaggaaatccag
aggcaacacagtggaacatgaaaagcatcttccagaagttgacctctgac
cttctcagctacaccattttttgtactttagtacctatacacgagatgat
cacttattttaaaagaggggggggggaggga
gaattccttttgaagtgccagtgttctttccctctgttcccagagctttc
ggtgtcttgggttgccatccagtggcaacagctacacacttcacttgtgt
gacaaaaccctctctctctcttcgaagcagggtgactgttctgatcagaa
ctcaatactgaatgataactttgtaaaactgatttatcccacttgtaccc
atgcttcccactgagacccataaagctatgcatatgtctagatactgaca
gagggaaagcagcagatgatagcaacagagaaaagaagttcttttatttt
ttaaggaaagctattatccacattcattacttccttatagtaattataaa
taatgagaaatatagagtttgtgtaagtttttacagtgtcactaactttt
acatttatacattaatgatgattgcacttaaaccaaatgttccatttttt
gatgtttttctcaggtatgatggaatctatgagtaaaaggaccatatata
aatttgagcagagaagttaaaacagctaaattcatccacttatttattct
aagatagaaaaattatgtttagcatatataaaggatgcactttaaacaac
ttgtataaacatcttaactctagtttgtgaacagtggtgaggatcctgca
ctatcataacattaaatgagacttacttaagctactttaaagaaaaatat
aatgaacacggaagcttaaaattagggtttctttgtttaaaacacagcat
aatttgatttgtggttttctttctatgtctgaagatgaagaagtttggag
gcaaaataacttgaaaaattgtttcacctagattaaaatccgtgtctctg
gatggaggaagttgtggttggagtttgttggtgtaacagatatcactttt
tatcatttgatgactgctttagaagcgctcactctatggtcacaaagccc
atggactgggaagaagctttctactactgagaatcatgagaaagaagata
acaattttactcatgactgatagaaatgcagatggggggagcatggggaa
aagagagagtgtgcttctacttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_115998111_115998491
seq2: B6Ng01-119K06.b_51_431 (reverse)

seq1  TCCCTCCCCCCCCCCTCTTTTAAAATAAGTGATCATCTCGTGTATAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCCCCCCCCTCTTTTAAAATAAGTGATCATCTCGTGTATAGGTA  50

seq1  CTAAAGTACAAAAAATGGTGTAGCTGAGAAGGTCAGAGGTCAACTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTACAAAAAATGGTGTAGCTGAGAAGGTCAGAGGTCAACTTCTGG  100

seq1  AAGATGCTTTTCATGTTCCACTGTGTTGCCTCTGGATTTCCTCATCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTTTTCATGTTCCACTGTGTTGCCTCTGGATTTCCTCATCTCTG  150

seq1  GTACTTTGCTATGTACATCATGCTTGCTGATGGGAAAAGGTTCTGGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGCTATGTACATCATGCTTGCTGATGGGAAAAGGTTCTGGGAAA  200

seq1  TGTCCTGTCTCCACCTCTCCTCTTGCTATAGGAATGCTCTATGGGTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGTCTCCACCTCTCCTCTTGCTATAGGAATGCTCTATGGGTTTTA  250

seq1  GGGTTCGAACTTGGGTCCTTAGGCTTGCATTTTTTTCTGCTTTTTACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCGAACTTGGGTCCTTAGGCTTGCATTTTTTTCTGCTTTTTACCAG  300

seq1  ATGAGCCATTTCCTTAGTCCTGTTCTCTATTATTTGTTATTTGGGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCATTTCCTTAGTCCTGTTCTCTATTATTTGTTATTTGGGAAAAT  350

seq1  AAATTTTTCTCTAGAATTTTATTTTCTTTAT  381
      |||||||||||||||||||||||||||||||
seq2  AAATTTTTCTCTAGAATTTTATTTTCTTTAT  381

seq1: chr14_115850291_115851361
seq2: B6Ng01-119K06.g_68_1140

seq1  GAATTCCTTTTGAAGTGCCAGTGTTCTTTCCCTCTGTTCCCAGAGCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTGAAGTGCCAGTGTTCTTTCCCTCTGTTCCCAGAGCTTTC  50

seq1  GGTGTCTTGGGTTGCCATCCAGTGGCAACAGCTACACACTTCACTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTTGGGTTGCCATCCAGTGGCAACAGCTACACACTTCACTTGTGT  100

seq1  GACAAAACCCTCTCTCTCTCTTCGAAGCAGGGTGACTGTTCTGATCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAACCCTCTCTCTCTCTTCGAAGCAGGGTGACTGTTCTGATCAGAA  150

seq1  CTCAATACTGAATGATAACTTTGTAAAACTGATTTATCCCACTTGTACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATACTGAATGATAACTTTGTAAAACTGATTTATCCCACTTGTACCC  200

seq1  ATGCTTCCCACTGAGACCCATAAAGCTATGCATATGTCTAGATACTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCCCACTGAGACCCATAAAGCTATGCATATGTCTAGATACTGACA  250

seq1  GAGGGAAAGCAGCAGATGATAGCAACAGAGAAAAGAAGTTCTTTTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAGCAGCAGATGATAGCAACAGAGAAAAGAAGTTCTTTTATTTT  300

seq1  TTAAGGAAAGCTATTATCCACATTCATTACTTCCTTATAGTAATTATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAAAGCTATTATCCACATTCATTACTTCCTTATAGTAATTATAAA  350

seq1  TAATGAGAAATATAGAGTTTGTGTAAGTTTTTACAGTGTCACTAACTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGAAATATAGAGTTTGTGTAAGTTTTTACAGTGTCACTAACTTTT  400

seq1  ACATTTATACATTAATGATGATTGCACTTAAACCAAATGTTCCATTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATACATTAATGATGATTGCACTTAAACCAAATGTTCCATTTTTT  450

seq1  GATGTTTTTCTCAGGTATGATGGAATCTATGAGTAAAAGGACCATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTTCTCAGGTATGATGGAATCTATGAGTAAAAGGACCATATATA  500

seq1  AATTTGAGCAGAGAAGTTAAAACAGCTAAATTCATCCACTTATTTATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGCAGAGAAGTTAAAACAGCTAAATTCATCCACTTATTTATTCT  550

seq1  AAGATAGAAAAATTATGTTTAGCATATATAAAGGATGCACTTTAAACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGAAAAATTATGTTTAGCATATATAAAGGATGCACTTTAAACAAC  600

seq1  TTGTATAAACATCTTAACTCTAGTTTGTGAACAGTGGTGAGGATCCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAACATCTTAACTCTAGTTTGTGAACAGTGGTGAGGATCCTGCA  650

seq1  CTATCATAACATTAAATGAGACTTACTTAAGCTACTTTAAAGAAAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATAACATTAAATGAGACTTACTTAAGCTACTTTAAAGAAAAATAT  700

seq1  AATGAACACGGAAGCTTAAAATTAGGGTTTCTTTGTTTAAAACACAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACACGGAAGCTTAAAATTAGGGTTTCTTTGTTTAAAACACAGCAT  750

seq1  AATTTGATTTGTGGTTTTCTTTCTATGTCTGAAGATGAAGAAGTTTGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATTTGTGGTTTTCTTTCTATGTCTGAAGATGAAGAAGTTTGGAG  800

seq1  GCAAAATAACTTGAAAAATTGTTTCACCTAGATTAAAATCCGTGTCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATAACTTGAAAAATTGTTTCACCTAGATTAAAATCCGTGTCTCTG  850

seq1  GATGGAGGAAGTTGTGGTTGGAGTTTGTTGGTGTAACAGATATCACTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGAAGTTGTGGTTGGAGTTTGTTGGTGTAACAGATATCACTTTT  900

seq1  TATCATTTGATGACTGCTTTAG-AGCGCTCACTCTATGGTCACATAGCCC  949
      |||||||||||||||||||||| ||||||||||||||||||||| || ||
seq2  TATCATTTGATGACTGCTTTAGAAGCGCTCACTCTATGGTCACAAAG-CC  949

seq1  CATGGACTTGGGAAG-AGCTTTCTACTACTGAG-ATCATGAGATAGAAGA  997
      ||||||| ||||||| ||||||||||||||||| ||||||||| ||||||
seq2  CATGGAC-TGGGAAGAAGCTTTCTACTACTGAGAATCATGAGAAAGAAGA  998

seq1  TAACAATTTTACTCCATGACTGATAGAAATGCAGAT-GGGGGAGCATGGG  1046
      ||||||||||||| |||||||||||||||||||||| |||||||||||||
seq2  TAACAATTTTACT-CATGACTGATAGAAATGCAGATGGGGGGAGCATGGG  1047

seq1  G-AGAGAGAGAGGGTGCTTCTACTTG  1071
      | | |||||||| |||||||||||||
seq2  GAAAAGAGAGAGTGTGCTTCTACTTG  1073