BAC Information

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BAC

Clone NameB6Ng01-119O13
Chromosome14 (Build37)
Map Location 35,139,784 - 35,280,165
singlet/doubletdoublet
Overlap geneGlud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a
Upstream geneArhgap22, Mapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142
Downstream gene9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik, Wapal, LOC100041341, Grid1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119O13.bB6Ng01-119O13.g
ACCDH923996DH923997
length1,179567
definitionDH923996|Mus musculus domesticus DNA, BAC clone: B6Ng01-119O13, 5' end.DH923997|Mus musculus domesticus DNA, BAC clone: B6Ng01-119O13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,278,982 - 35,280,165)(35,139,784 - 35,140,356)
sequence
gaattcttctgttctctgaataggacatttagaaataattgcatttggct
tggtggcacacagctgtaatcctggcattttagagtatgatgccagggga
taagtttatcctgggcaacttcacttaaaagttcaggttcaaagtgaggt
cctgtttgaaaagaaacccaaaggagagaacagagggagggtgggtttta
atgcgttggtatagttacatcttatccctcaatatcaagtaaaatctttg
tatgttaagtgtaaaataaacaaactgacccccctctctgatgcccttgc
ctcatgactgcttattacacatagttgtgtgatccccccccccccgaaag
tgaatagaacacttcattccagatagggaacatgccacaaatgaaagaaa
gagtgccacccaagtgtagtttggtgaaccagtgagcctattggggttac
tcaggaacatggccaagacttaacagaagagctgcatcactgcagttctc
tgccagcactttcttactgcttattatggaactcttggcgaggagctccg
taagtcttgtgttttgtaagcttcctaagtcttatgaatttcccttctct
ctgcaggatcaatattctaattaggaaaacacagcaatacaacagaagca
taggcataatctttaatattttaagagcaatttaaattttcattcaattt
ataaggaatattttggggtacgctctactcttccagatgaccctggtttg
attcccaagacccacataactattcataaccatccataactacacatgca
ctcttggggctttagaacgcattcctggtgacctcattttattgtagcag
aactcttttggtattttcagcattggtatttttcataaatttaattacaa
gtttctttatgattaggattgtccagcagtggatgttgcacttagtagtc
tagaattactttctagtgattttttttttttgatagtagaaattttactg
tcttgtaaagcttctattcaaaagaatcttgttggatggtgcttttacat
ttagctaataataaatatcatgaatattctaaagtctttaaagaaaaaag
gaatagttatgtatttctctactgatctgtttaattgggaaagcaagata
gattatcagaagttacttacatgaactta
acattccagcctggtgatgcctttgtggttatttgaattgcatgtttgct
tttagcctaaaatcttagttatattttacccttgagtttttcagatttca
tgcagtcatatttattgccatattttcatacgttttttccagcgtagttg
taagtcttgaaagttccaaaagtgactcactggaactctgaaggacagtc
tgagtaatttggcccctttgcttgtagaaggcaaatgaaagcttatctct
tgtcttctcacttccctttctacagggttcaccatcagacttgagtctga
attcttaccgttagccctgggagtttagggtcagatatgggtggagtggg
atagaggaggaaaagtcagattttgataggaattgtgttgaatatagagg
ccatgggggggggcatatttaccaaattaagccttctaacccataaacat
gggcatctttgtgcttatagggcttattttcttcatacttctcaatacta
gaaacaactacagagtccttttgatgctattgtaagggataatgatatat
tagggggttatttttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35278982_35280165
seq2: B6Ng01-119O13.b_50_1228 (reverse)

seq1  TAAGTTTTCTATGTAAGTTAACATACTTGATAATC-ATCTTTCCTTTCCA  49
      ||||||    ||||||| |||| |   |||||||| ||||| | || |||
seq2  TAAGTT---CATGTAAG-TAACTT--CTGATAATCTATCTTGCTTTCCCA  44

seq1  ATTAAACAGAATCAGTAGAGAAATACAT-ACTA-TCCTTTTTTCTGTAAA  97
      ||||||||| |||||||||||||||||| |||| ||||||||||| ||||
seq2  ATTAAACAG-ATCAGTAGAGAAATACATAACTATTCCTTTTTTCTTTAAA  93

seq1  GACTTTAAGAAATTATCAATGATATTTATTATTAGCTAAGATGTAAAAGC  147
      |||||| ||||  |||  ||||||||||||||||||||| ||||||||||
seq2  GACTTT-AGAA--TATTCATGATATTTATTATTAGCTAA-ATGTAAAAGC  139

seq1  ACCATCAAACAAGATTC-TATGAATAG-AGCTTTACAAGACAGTAAAATT  195
      |||||| |||||||||| | ||||||| ||||||||||||||||||||||
seq2  ACCATCCAACAAGATTCTTTTGAATAGAAGCTTTACAAGACAGTAAAATT  189

seq1  TCTACTATCAAAAAAAAAAAATCACTAGAAAGTAATTCTAGACTACTAAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTATCAAAAAAAAAAAATCACTAGAAAGTAATTCTAGACTACTAAG  239

seq1  TGCAACATCCACTGCTGGACAATCCTAATCATAAAGAAACTTGTAATTAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACATCCACTGCTGGACAATCCTAATCATAAAGAAACTTGTAATTAA  289

seq1  ATTTATGAAAAATACCAATGCTGAAAATACCAAAAGAGTTCTGCTACAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGAAAAATACCAATGCTGAAAATACCAAAAGAGTTCTGCTACAAT  339

seq1  AAAATGAGGTCACCAGGAATGCGTTCTAAAGCCCCAAGAGTGCATGTGTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGGTCACCAGGAATGCGTTCTAAAGCCCCAAGAGTGCATGTGTA  389

seq1  GTTATGGATGGTTATGAATAGTTATGTGGGTCTTGGGAATCAAACCAGGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGATGGTTATGAATAGTTATGTGGGTCTTGGGAATCAAACCAGGG  439

seq1  TCATCTGGAAGAGTAGAGCGTACCCCAAAATATTCCTTATAAATTGAATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGGAAGAGTAGAGCGTACCCCAAAATATTCCTTATAAATTGAATG  489

seq1  AAAATTTAAATTGCTCTTAAAATATTAAAGATTATGCCTATGCTTCTGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAAATTGCTCTTAAAATATTAAAGATTATGCCTATGCTTCTGTT  539

seq1  GTATTGCTGTGTTTTCCTAATTAGAATATTGATCCTGCAGAGAGAAGGGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCTGTGTTTTCCTAATTAGAATATTGATCCTGCAGAGAGAAGGGA  589

seq1  AATTCATAAGACTTAGGAAGCTTACAAAACACAAGACTTACGGAGCTCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATAAGACTTAGGAAGCTTACAAAACACAAGACTTACGGAGCTCCT  639

seq1  CGCCAAGAGTTCCATAATAAGCAGTAAGAAAGTGCTGGCAGAGAACTGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAAGAGTTCCATAATAAGCAGTAAGAAAGTGCTGGCAGAGAACTGCA  689

seq1  GTGATGCAGCTCTTCTGTTAAGTCTTGGCCATGTTCCTGAGTAACCCCAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCAGCTCTTCTGTTAAGTCTTGGCCATGTTCCTGAGTAACCCCAA  739

seq1  TAGGCTCACTGGTTCACCAAACTACACTTGGGTGGCACTCTTTCTTTCAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTCACTGGTTCACCAAACTACACTTGGGTGGCACTCTTTCTTTCAT  789

seq1  TTGTGGCATGTTCCCTATCTGGAATGAAGTGTTCTATTCACTTTC-GGGG  844
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTGTGGCATGTTCCCTATCTGGAATGAAGTGTTCTATTCACTTTCGGGGG  839

seq1  GGGGGGGATCACACAACTATGTGTAATAAGCAGTCATGAGGCAAGGGCAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGATCACACAACTATGTGTAATAAGCAGTCATGAGGCAAGGGCAT  889

seq1  CAGAGAGGGGGGTCAGTTTGTTTATTTTACACTTAACATACAAAGATTTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGGGGGTCAGTTTGTTTATTTTACACTTAACATACAAAGATTTT  939

seq1  ACTTGATATTGAGGGATAAGATGTAACTATACCAACGCATTAAAACCCAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATATTGAGGGATAAGATGTAACTATACCAACGCATTAAAACCCAC  989

seq1  CCTCCCTCTGTTCTCTCCTTTGGGTTTCTTTTCAAACAGGACCTCACTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCTGTTCTCTCCTTTGGGTTTCTTTTCAAACAGGACCTCACTTT  1039

seq1  GAACCTGAACTTTTAAGTGAAGTTGCCCAGGATAAACTTATCCCCTGGCA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGAACTTTTAAGTGAAGTTGCCCAGGATAAACTTATCCCCTGGCA  1089

seq1  TCATACTCTAAAATGCCAGGATTACAGCTGTGTGCCACCAAGCCAAATGC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTCTAAAATGCCAGGATTACAGCTGTGTGCCACCAAGCCAAATGC  1139

seq1  AATTATTTCTAAATGTCCTATTCAGAGAACAGAAGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTCTAAATGTCCTATTCAGAGAACAGAAGAATTC  1179

seq1: chr14_35139784_35140356
seq2: B6Ng01-119O13.g_70_642

seq1  GAATTCACATTCCAGCCTGGTGATGCCTTTGTGGTTATTTGAATTGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTCCAGCCTGGTGATGCCTTTGTGGTTATTTGAATTGCATG  50

seq1  TTTGCTTTTAGCCTAAAATCTTAGTTATATTTTACCCTTGAGTTTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTTAGCCTAAAATCTTAGTTATATTTTACCCTTGAGTTTTTCAG  100

seq1  ATTTCATGCAGTCATATTTATTGCCATATTTTCATACGTTTTTTCCAGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGCAGTCATATTTATTGCCATATTTTCATACGTTTTTTCCAGCG  150

seq1  TAGTTGTAAGTCTTGAAAGTTCCAAAAGTGACTCACTGGAACTCTGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTAAGTCTTGAAAGTTCCAAAAGTGACTCACTGGAACTCTGAAGG  200

seq1  ACAGTCTGAGTAATTTGGCCCCTTTGCTTGTAGAAGGCAAATGAAAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTGAGTAATTTGGCCCCTTTGCTTGTAGAAGGCAAATGAAAGCTT  250

seq1  ATCTCTTGTCTTCTCACTTCCCTTTCTACAGGGTTCACCATCAGACTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTGTCTTCTCACTTCCCTTTCTACAGGGTTCACCATCAGACTTGA  300

seq1  GTCTGAATTCTTACCGTTAGCCCTGGGAGTTTAGGGTCAGATATGGGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAATTCTTACCGTTAGCCCTGGGAGTTTAGGGTCAGATATGGGTGG  350

seq1  AGTGGGATAGAGGAGGAAAAGTCAGATTTTGATAGGAATTGTGTTGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGATAGAGGAGGAAAAGTCAGATTTTGATAGGAATTGTGTTGAATA  400

seq1  TAGAGGCCATGGGGGGGGGCATATTTACCAAATTAAGCCTTCTAACCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCCATGGGGGGGGGCATATTTACCAAATTAAGCCTTCTAACCCAT  450

seq1  AAACATGGGCATCTTTGTGCTTATAGGGCTTATTTTCTTCATACTTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGGCATCTTTGTGCTTATAGGGCTTATTTTCTTCATACTTCTCA  500

seq1  ATACTAGAAACAACTACAGAGTCCTTTTGATGCTATTGTAAGGGATAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGAAACAACTACAGAGTCCTTTTGATGCTATTGTAAGGGATAATG  550

seq1  ATATATTAGGGGGTTATTTTTGA  573
      |||||||||||||||||||||||
seq2  ATATATTAGGGGGTTATTTTTGA  573