BAC Information

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BAC

Clone NameB6Ng01-120A07
Chromosome14 (Build37)
Map Location 108,006,625 - 108,169,420
singlet/doubletdoublet
Overlap geneLOC668752, EG668754
Upstream geneLOC668748
Downstream geneLOC668757, EG668761
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120A07.bB6Ng01-120A07.g
ACCDH924078DH924079
length1,145446
definitionDH924078|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A07, 5' end.DH924079|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,168,280 - 108,169,420)(108,006,625 - 108,007,077)
sequence
gaattctgaatacattatagatcatttaattctaccagtatttgaataaa
agaaagtaaagcatgaacatctatactataaaaataaaatttagaggtaa
tgattgagcttatttgcaatataatttcatcagggtcattttttgttgaa
tcaaaatatagcaatctgaagtgttttttcctaataattcttaaagcaat
tatgaataaccagaaacactaatatttaagaacatttaacaatgtcctgg
tatcagaaatatacttaaaaatatacatgcattatatttctcctattgaa
ttaaagaggacagtgtgggtacagtatgcataaataagagaggttagggt
agaaatcaagaaagacaatttcaaatatttctttattctgagtgattcat
gaaatgaaatagagcactttaaatattatagaaacaaaatgcagagaaaa
atagtataagaaattactgtcaaactcagtgagcaaaatatgaacagatg
ttagcaaagtgttgtcatcatttataaaaggaaaaacctgatgtgtttcc
ccttcgttggccatataaataattcagatatttgttattctctgctttat
aaagttctcactgttttctttaactgtcccgagtcttcctcctactgcat
ttctatatttgttgtactcctacttgataaaccatgctggctcccacagt
accttttctgtctttgtgtgttagcgagtttgctgctgtccatgctttct
cctttgtgcatgtaaaatcatttagagatattgtgttttcctaggctcta
aactgaggtaggctggaaaacagccaactcagttttaaccaaatactcaa
gattcaatcatgcccccttaaattccaagcttttgcataccacaagtgtg
tattaaattagagtttgtgttcttttttctgggatgtttaattagataag
agattggatgtgtttttctcagtcttcgttaggtgtaatttctttgtata
cactccatgttgtatacaataaaacctagttactgttagcttttgtcaat
gatattcgcacataataaaaacatgattaatagaaaagcaaaaaataaaa
cttctccccctggtataatttactgtcaccagaacaaccttataa
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtctgccttcttgatttctttatatatattggatattagtccc
ctatccaatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttttcttattgactgtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagtcattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgtggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttcctaat
ccacttagatttacctagtacaaggagataaaaaaaaaatttttaaccaa
agctgagtgtctacagccctctggagagaagcaaacatagttcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108168280_108169420
seq2: B6Ng01-120A07.b_47_1191 (reverse)

seq1  TTATAA-GTTGTTCTGTTGACAGT-AATTATACCA--GGGAGAAGTTTTA  46
      |||||| ||||||||| ||||||| ||||||||||  |||||||||||||
seq2  TTATAAGGTTGTTCTGGTGACAGTAAATTATACCAGGGGGAGAAGTTTTA  50

seq1  TTTTGTGCTTTTCTATTAATCATGTTTT--ATATGTGCGAATATCATTGA  94
      |||| |||||||||||||||||||||||   |||||||||||||||||||
seq2  TTTTTTGCTTTTCTATTAATCATGTTTTTATTATGTGCGAATATCATTGA  100

seq1  C-ATAGCT-ACAGTAACTAGGTTTTATTGTATACAACATGGAGTTGTATA  142
      | | |||| |||||||||||||||||||||||||||||||||| ||||||
seq2  CAAAAGCTAACAGTAACTAGGTTTTATTGTATACAACATGGAG-TGTATA  149

seq1  CAAAGAAATTACACCTAACGAAGAACTGAGAAAAACACATCCAATCTCCT  192
      ||||||||||||||||||||||| ||||||||||||||||||||||| ||
seq2  CAAAGAAATTACACCTAACGAAG-ACTGAGAAAAACACATCCAATCT-CT  197

seq1  TATCTAATTAAAACATCCCAGAAAAAAGAACACAAACTCTAATTTAATAC  242
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATT-AAACATCCCAGAAAAAAGAACACAAACTCTAATTTAATAC  246

seq1  ACACTTGTGGTATGCAAAAGCTTGGAATTTAAGGGGGCATGATTGAATCT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGTGGTATGCAAAAGCTTGGAATTTAAGGGGGCATGATTGAATCT  296

seq1  TGAGTATTTGGTTAAAACTGAGTTGGCTGTTTTCCAGCCTACCTCAGTTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTTGGTTAAAACTGAGTTGGCTGTTTTCCAGCCTACCTCAGTTT  346

seq1  AGAGCCTAGGAAAACACAATATCTCTAAATGATTTTACATGCACAAAGGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTAGGAAAACACAATATCTCTAAATGATTTTACATGCACAAAGGA  396

seq1  GAAAGCATGGACAGCAGCAAACTCGCTAACACACAAAGACAGAAAAGGTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATGGACAGCAGCAAACTCGCTAACACACAAAGACAGAAAAGGTA  446

seq1  CTGTGGGAGCCAGCATGGTTTATCAAGTAGGAGTACAACAAATATAGAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGAGCCAGCATGGTTTATCAAGTAGGAGTACAACAAATATAGAAA  496

seq1  TGCAGTAGGAGGAAGACTCGGGACAGTTAAAGAAAACAGTGAGAACTTTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAGGAGGAAGACTCGGGACAGTTAAAGAAAACAGTGAGAACTTTA  546

seq1  TAAAGCAGAGAATAACAAATATCTGAATTATTTATATGGCCAACGAAGGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGAGAATAACAAATATCTGAATTATTTATATGGCCAACGAAGGG  596

seq1  GAAACACATCAGGTTTTTCCTTTTATAAATGATGACAACACTTTGCTAAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACATCAGGTTTTTCCTTTTATAAATGATGACAACACTTTGCTAAC  646

seq1  ATCTGTTCATATTTTGCTCACTGAGTTTGACAGTAATTTCTTATACTATT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCATATTTTGCTCACTGAGTTTGACAGTAATTTCTTATACTATT  696

seq1  TTTCTCTGCATTTTGTTTCTATAATATTTAAAGTGCTCTATTTCATTTCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGCATTTTGTTTCTATAATATTTAAAGTGCTCTATTTCATTTCA  746

seq1  TGAATCACTCAGAATAAAGAAATATTTGAAATTGTCTTTCTTGATTTCTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACTCAGAATAAAGAAATATTTGAAATTGTCTTTCTTGATTTCTA  796

seq1  CCCTAACCTCTCTTATTTATGCATACTGTACCCACACTGTCCTCTTTAAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACCTCTCTTATTTATGCATACTGTACCCACACTGTCCTCTTTAAT  846

seq1  TCAATAGGAGAAATATAATGCATGTATATTTTTAAGTATATTTCTGATAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGGAGAAATATAATGCATGTATATTTTTAAGTATATTTCTGATAC  896

seq1  CAGGACATTGTTAAATGTTCTTAAATATTAGTGTTTCTGGTTATTCATAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACATTGTTAAATGTTCTTAAATATTAGTGTTTCTGGTTATTCATAA  946

seq1  TTGCTTTAAGAATTATTAGGAAAAAACACTTCAGATTGCTATATTTTGAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTAAGAATTATTAGGAAAAAACACTTCAGATTGCTATATTTTGAT  996

seq1  TCAACAAAAAATGACCCTGATGAAATTATATTGCAAATAAGCTCAATCAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAAAAATGACCCTGATGAAATTATATTGCAAATAAGCTCAATCAT  1046

seq1  TACCTCTAAATTTTATTTTTATAGTATAGATGTTCATGCTTTACTTTCTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTAAATTTTATTTTTATAGTATAGATGTTCATGCTTTACTTTCTT  1096

seq1  TTATTCAAATACTGGTAGAATTAAATGATCTATAATGTATTCAGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAAATACTGGTAGAATTAAATGATCTATAATGTATTCAGAATTC  1145

seq1: chr14_108006625_108007077
seq2: B6Ng01-120A07.g_65_510

seq1  GAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCTGCCTTCTTGATTTCTTTATATATATTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCTGCCTTCTTGATTTCTTTATATATATTGGATATTAGTCCC  100

seq1  CTATCCAATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150

seq1  TTTTTTCTTATTGACTGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTATTGACTGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTA  200

seq1  TGAGGTCCCATTTATCGATTCTTGATCTTACAGCACAAGTCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTATCGATTCTTGATCTTACAGCACAAGTCATTGCTGTT  250

seq1  CTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGTGGCTTTTCCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGTGGCTTTTCCCTAC  300

seq1  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAA  350
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCC-TAA  349

seq1  TCCACTTAGATTTGACCTTAGTACAAGGAGATAAAAAAAAAAAATTTTTC  400
      ||||||||||||| ||| ||||||||||||||||||||||||   |||| 
seq2  TCCACTTAGATTT-ACC-TAGTACAAGGAGATAAAAAAAAAA---TTTTT  394

seq1  AACCAAAAGCTGAGCTGTCTACAGCCCTCTGGAGAG-AGCAAACATAGCT  449
      |||| ||||||||| ||||||||||||||||||||| ||||||||||| |
seq2  AACC-AAAGCTGAG-TGTCTACAGCCCTCTGGAGAGAAGCAAACATAGTT  442

seq1  CTTT  453
      ||||
seq2  CTTT  446