BAC Information

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BAC

Clone NameB6Ng01-120B19
Chromosome14 (Build37)
Map Location 9,963,569 - 9,964,531
singlet/doubletsinglet
Overlap geneLOC100041948
Upstream genePxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
Downstream geneFhit, LOC100042415
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120B19.bB6Ng01-120B19.g
ACCDH924141DH924142
length6781,067
definitionDH924141|Mus musculus domesticus DNA, BAC clone: B6Ng01-120B19, 5' end.DH924142|Mus musculus domesticus DNA, BAC clone: B6Ng01-120B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttataagagttgatatggtcatggtgtctttccatagcaatag
aaacccaaactaagacttggtttaagacttgatggtttgaatgattatat
ccccatagactcatagatttaattgcatagtcaccagaaaatgatctgtt
tgaaaggcttaggaggggtaatattggtgtaggaactgtgacaccttgtt
gaagggactaggttttgaagtttcaaagtccatgccaggcccagtatttt
attctcactcctctctctcctctctctcttctccctcctctctctcctcc
ctctctcttctcctctctccccttccccctctctcctctctctcccctct
cccgtcctctctctctttctctccctctctcttcctccctctttctctcc
ttccccacccttctcaatttctctccccctcaggtctctctccctctgcc
ttctctcatgtggatcaggatgtagctcacagctacttctccttcagcat
catatgtttctcagggcttattgtcatgataatgcctctgaaactgtgag
caagccaccaattaaatattttatttcatatgagctgcctttgttcttgt
ttctcttcatagtaatttgaactgtaattaagacagatctgaaaattaat
tcaaccaaaaatttccagggccttccaa

gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccgggtttcggcaccaattgttattaga
cgcgttctcacgaccggccaggaaagacgcaacaaaccagaatcttctgc
ggcaaagctttattgcttacatcttcaggagccagagtgcaagagagcaa
gcaagcaaatggcgaaaccccatccctttttaaggagaattatcctccac
ctaggatgtattactccctgattggctgcagcccatcggcccagttgtca
tcacgggaaaggcagaacacatggtgggaaaactgcccctgcatgtgtgc
agactatgtttaccacttagaacacagctgtcagtgccatcttataatgg
caaatgtgagggcggctcctcacactgttgagagaaaaaaaaagcatgta
tacatacatatgtacacatatgtgtacacacagagttccagaaaattctc
atttctctgattctttgggttcaaaggatgagctaggctcattcagctcc
aaaccagatttttttatttcaagtgcccagaattggctttggctaattta
acagagcagaaatgtgttacaaagcatgagattgtggggagcgggtgtgg
cggcagtcccaaagggcgccagggactgcagctaagtcatatgatttgca
cctgacttcctcatataagacacaaacatcttgagtgctgcgcaggtgta
ccaggataccggtgaatccattttgatggagatatgtccctgctgccctg
attagctgaagctgcgtgcctggtgaggtggcgtggcctgctgtgcgtga
tgggaactgagagtataaagagtgagaggccagggttcggggagatataa
caaggagatataaacagggggatattaacagggggatataaccaggagta
taacagggagattaaaacagggagattaaaacagggaaattaacaagggg
aaattaaacaagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9963569_9964531
seq2: B6Ng01-120B19.g_67_1133

seq1  GAATTCATACAGTTGAATCCTTCTTAACAGTCTGCTTTACGGGAACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACAGTTGAATCCTTCTTAACAGTCTGCTTTACGGGAACCTTT  50

seq1  ATTACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGC  100

seq1  CAGTCCCGAGTTTTTTCTCGTCCCGGGTTTCGGCACCAATTGTTATTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCGAGTTTTTTCTCGTCCCGGGTTTCGGCACCAATTGTTATTAGA  150

seq1  CGCGTTCTCACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTTCTCACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGC  200

seq1  GGCAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGTGCAAGAGAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGTGCAAGAGAGCAA  250

seq1  GCAAGCAAATGGCGAAACCCCATCCCTTTTTAAGGAGAATTATCCTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAAATGGCGAAACCCCATCCCTTTTTAAGGAGAATTATCCTCCAC  300

seq1  CTAGGATGTATTACTCCCTGATTGGCTGCAGCCCATCGGCCCAGTTGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATGTATTACTCCCTGATTGGCTGCAGCCCATCGGCCCAGTTGTCA  350

seq1  TCACGGGAAAGGCAGAACACATGGTGGGAAAACTGCCCCTGCATGTGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGGAAAGGCAGAACACATGGTGGGAAAACTGCCCCTGCATGTGTGC  400

seq1  AGACTATGTTTACCACTTAGAACACAGCTGTCAGTGCCATCTTATAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGTTTACCACTTAGAACACAGCTGTCAGTGCCATCTTATAATGG  450

seq1  CAAATGTGAGGGCGGCTCCTCACACTGTTGAGAGAAAAAAAAAGCATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGAGGGCGGCTCCTCACACTGTTGAGAGAAAAAAAAAGCATGTA  500

seq1  TACATACATATGTACACATATGTGTACACACAGAGTTCCAGAAAATTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATATGTACACATATGTGTACACACAGAGTTCCAGAAAATTCTC  550

seq1  ATTTCTCTGATTCTTTGGGTTCAAAGGATGAGCTAGGCTCATTCAGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTGATTCTTTGGGTTCAAAGGATGAGCTAGGCTCATTCAGCTCC  600

seq1  AAACCAGATTTTTTTATTTCAAGTGCCCAGAATTGGCTTTGGCTAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGATTTTTTTATTTCAAGTGCCCAGAATTGGCTTTGGCTAATTTA  650

seq1  ACAGAGCAGAAATGTGTTACAAAGCATGAGATTGTGGGGAGCGGGTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAGAAATGTGTTACAAAGCATGAGATTGTGGGGAGCGGGTGTGG  700

seq1  CGGCAGTCCCAAA-GGCGCCAGGGACTGCAGCTAAGTCATATGATTTGCA  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CGGCAGTCCCAAAGGGCGCCAGGGACTGCAGCTAAGTCATATGATTTGCA  750

seq1  CCTGACTTCCTCATATAAGACACAAACATCTTGAGTGCTGCGCAGGTGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTCCTCATATAAGACACAAACATCTTGAGTGCTGCGCAGGTGTA  800

seq1  CCAGGATACCGGTGAATCCAATTTGATGGAGATATGTCCCTGCTGCCCTG  849
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCAGGATACCGGTGAATCCATTTTGATGGAGATATGTCCCTGCTGCCCTG  850

seq1  ATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCGTGGCCTGCTGTGCGTGG  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCGTGGCCTGCTGTGCGT-G  899

seq1  ATGGGAACTGAGAGTATAAAAGAGTGAGAGGCCCAGGGTTCGGGGGAGAT  949
      ||||||||||||||||| ||||||||||||| ||||||||| ||||||||
seq2  ATGGGAACTGAGAGTAT-AAAGAGTGAGAGG-CCAGGGTTC-GGGGAGAT  946

seq1  ATAAACAAGGGAGA------------------------------------  963
      || ||||| |||||                                    
seq2  AT-AACAA-GGAGATATAAACAGGGGGATATTAACAGGGGGATATAACCA  994

seq1  --------------------------------------------------  963
                                                        
seq2  GGAGTATAACAGGGAGATTAAAACAGGGAGATTAAAACAGGGAAATTAAC  1044

seq1  -----------------------  963
                             
seq2  AAGGGGAAATTAAACAAGGGAGA  1067


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