BAC Information

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BAC

Clone NameB6Ng01-121A23
Chromosome14 (Build37)
Map Location 22,313,431 - 22,506,514
singlet/doubletdoublet
Overlap geneMyst4, EG435391
Upstream geneZmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
Downstream geneDusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075, EG435392
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121A23.bB6Ng01-121A23.g
ACCDH924841DH924842
length1,1291,142
definitionDH924841|Mus musculus domesticus DNA, BAC clone: B6Ng01-121A23, 5' end.DH924842|Mus musculus domesticus DNA, BAC clone: B6Ng01-121A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,313,431 - 22,314,566)(22,505,352 - 22,506,514)
sequence
gaattccacagggagtggaggtatggctcagccgatagagtattcaccta
gcatacaacaggtcctagcttctagcttcaatccccaacaccacaccaaa
aaataagggtaaaagaattacaaatgccttcaaggctcttctttagtgca
gcgggcctggattcacctagactgcctacaactgtcctcagttttgcctg
atagaatcccagacttgtgagtgctggaattataggagagccactacaac
tggtcagcttggttggttaaatatagatctattaatctaaatgctatctc
ttaaatacatattagacagcaaacttcataagcctgaagatttcctatac
agagtcttatgtaagtatgtaagtttgcacagggtgttttgaaaagatgc
tgatgaggactggggacttagtataatatggtagagtacttacctagcaa
gtctgaaacccgggtttcttcctccagcactaagtaaataaacttgggct
ggggatgcacctgtcttctgcacttaggaggtgagagcagaaggctcaca
aattagactgaagggcagcaagttttaggccagcctgggttatgtaaggc
tcagtcttatttacacaaaaattaaagtttctagtgtgaatgtatgtata
tgtaagtatatcacatgcccacaggtacccacaaaggccagaagagagag
ctggattgtctgggactggagttaaaggtggctgtgcccaatgtggatgc
taggaactgaacctgggttctgcaagaacaaattcttttaacttctgagc
catctttccagctccagttctcccttattaaaaacaagagagcttgctcc
tctcttgctcttgctcttcccttcttgctcccgccctctccccattcctt
tctcccagcccccttccatgtactcatggctggtctctacttctctctct
tttctctctctctttctctctctccgcctttctctgcctcttaactctct
tccccatgccctgaataactccattctatactaaaaaacaaacaaaacag
agaaatgaaaaccccaacaaataatagcagacctacctcaaatattctta
tttaattagtctcatggtgaaacctaggg
gaattctatctaatcccaacaaaatcctctgaaacaccgatttgaagcat
tttccccagctatgacctccaaacccattaatgtttggaagctacagaac
aggggcctcttttaaaggttctcccaggggctctgtgaagcaggctcaga
ggaacagattgtgtttcagttgcctttggggagatctgacaggtccacct
ccaggacctgcagcgtaaggtgaatgatccaaagggaaagggcaaatgcc
cagactgcgcctacccagggctgggcagatggtagctttcttatagtcat
gaaaccaaacggtgcccagtggcctggggctcgggaagagcgctgctttg
ggtctttgcctgtaatctccctgcgattactgggtccagcgttgaaagcc
gtgcaccacccaaagcgcggcgtccaccaaccgaccgacccttctccctg
cgcccagggccacggcgctggaccgctatgggctgcagaaggcgggtttc
acgcacgtgctgaacgcggcgcacggccgctggaatgtggacaccgggcc
ggactactaccgagacatggccatcgagtaccacggcgtcgaggccgacg
acgtgcccaccttcgacctcagcatctttttctactccgctgcggccttc
atcgactcggcactccgagatgaccacagtaagtgaccctctccaactct
gccctgacaaggccccgcccccaggctgaaaacccacccatcaggtcccg
ctcccagacataaaacacgccccccctcccgccagccgaggcaccacccc
tcccgcccacagtgtgctttccccctgctaggtcatgccccaaggcatgc
tatcctctccctctggggagaggtcctgccctcatattccctcccaggat
ctcaacccggccctgccccagtggatcagagcaggatctacagaaagtga
tctcaacctggtgtacggggctgagattgaaggcaggatggctgagctac
tgcctggcatgtggtgttgctgggtgggggtcggctggatatacaggttg
agatagggaagggggaggctaaaggaggcttggggctgacttccacttct
tgaagacaagcacccttataggacagggtggccggggtggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22313431_22314566
seq2: B6Ng01-121A23.b_49_1177

seq1  GAATTCCACAGGGAGTGGAGGTATGGCTCAGCCGATAGAGTATTCACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGGGAGTGGAGGTATGGCTCAGCCGATAGAGTATTCACCTA  50

seq1  GCATACAACAGGTCCTAGCTTCTAGCTTCAATCCCCAACACCACACCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAACAGGTCCTAGCTTCTAGCTTCAATCCCCAACACCACACCAAA  100

seq1  AAATAAGGGTAAAAGAATTACAAATGCCTTCAAGGCTCTTCTTTAGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGGTAAAAGAATTACAAATGCCTTCAAGGCTCTTCTTTAGTGCA  150

seq1  GCGGGCCTGGATTCACCTAGACTGCCTACAACTGTCCTCAGTTTTGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCCTGGATTCACCTAGACTGCCTACAACTGTCCTCAGTTTTGCCTG  200

seq1  ATAGAATCCCAGACTTGTGAGTGCTGGAATTATAGGAGAGCCACTACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATCCCAGACTTGTGAGTGCTGGAATTATAGGAGAGCCACTACAAC  250

seq1  TGGTCAGCTTGGTTGGTTAAATATAGATCTATTAATCTAAATGCTATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGCTTGGTTGGTTAAATATAGATCTATTAATCTAAATGCTATCTC  300

seq1  TTAAATACATATTAGACAGCAAACTTCATAAGCCTGAAGATTTCCTATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACATATTAGACAGCAAACTTCATAAGCCTGAAGATTTCCTATAC  350

seq1  AGAGTCTTATGTAAGTATGTAAGTTTGCACAGGGTGTTTTGAAAAGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTATGTAAGTATGTAAGTTTGCACAGGGTGTTTTGAAAAGATGC  400

seq1  TGATGAGGACTGGGGACTTAGTATAATATGGTAGAGTACTTACCTAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGGACTGGGGACTTAGTATAATATGGTAGAGTACTTACCTAGCAA  450

seq1  GTCTGAAACCCGGGTTTCTTCCTCCAGCACTAAGTAAATAAACTTGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAACCCGGGTTTCTTCCTCCAGCACTAAGTAAATAAACTTGGGCT  500

seq1  GGGGATGCACCTGTCTTCTGCACTTAGGAGGTGAGAGCAGAAGGCTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGCACCTGTCTTCTGCACTTAGGAGGTGAGAGCAGAAGGCTCACA  550

seq1  AATTAGACTGAAGGGCAGCAAGTTTTAGGCCAGCCTGGGTTATGTAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGACTGAAGGGCAGCAAGTTTTAGGCCAGCCTGGGTTATGTAAGGC  600

seq1  TCAGTCTTATTTACACAAAAATTAAAGTTTCTAGTGTGAATGTATGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTATTTACACAAAAATTAAAGTTTCTAGTGTGAATGTATGTATA  650

seq1  TGTAAGTATATCACATGCCCACAGGTACCCACAAAGGCCAGAAGAGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTATATCACATGCCCACAGGTACCCACAAAGGCCAGAAGAGAGAG  700

seq1  CTGGATTGTCTGGGACTGGAGTTAAAGGTGGCTGTGCCCAATGTGGATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTGTCTGGGACTGGAGTTAAAGGTGGCTGTGCCCAATGTGGATGC  750

seq1  TAGGAACTGAACCTGGGTTCTGCAAGAACAAATTCTTTTAACTTCTGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACTGAACCTGGGTTCTGCAAGAACAAATTCTTTTAACTTCTGAGC  800

seq1  CATCTTTCCAGCTCCAGTTCTCCCTTATTAAAAACAAGAGAGCTTGCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTCCAGCTCCAGTTCTCCCTTATTAAAAACAAGAGAGCTTGCTCC  850

seq1  TCTCTTGCTCTTGCTCTTCCCTTCTTGCTCCCGCCCTCTCCCCATTCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCTCTTGCTCTTCCCTTCTTGCTCCCGCCCTCTCCCCATTCCTT  900

seq1  TCTCCCAGCCCCCTTCCATGTACTCATGGCTGGTCTCTACTTCTCTCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAGCCCCCTTCCATGTACTCATGGCTGGTCTCTACTTCTCTCTCT  950

seq1  TTTCTCTCTCTCTTTCTCTCTCTCCGCCTTTCTCTGCCTCTTAACTCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTCTCTTTCTCTCTCTCCGCCTTTCTCTGCCTCTTAACTCTCT  1000

seq1  TCCCCATGCCCTGAATAAACTCCATTCTATACTAAAAAACAAAACAAAAC  1050
      |||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  TCCCCATGCCCTGAAT-AACTCCATTCTATACTAAAAAAC-AAACAAAAC  1048

seq1  AAGAGAAAATGAAAAACCCCAAACAAATAATAGCAGACCCTACCTCCAAA  1100
       |||| |||||||||  ||| |||||||||||||||| ||||||| ||||
seq2  -AGAG-AAATGAAAA--CCCCAACAAATAATAGCAGA-CCTACCT-CAAA  1092

seq1  TATTCTAATTTAATTAGTCTCAT-GTGAGACCTAGGG  1136
      |||||| |||||||||||||||| |||| ||||||||
seq2  TATTCTTATTTAATTAGTCTCATGGTGAAACCTAGGG  1129

seq1: chr14_22505352_22506514
seq2: B6Ng01-121A23.g_64_1205 (reverse)

seq1  ATCCACCCCGGCTCACCCTGGTCTTTTTAGGGGTGCTTGTTCCTCATGAG  50
      |||||||||||| |||||||  |  | || ||||||||| || ||| || 
seq2  ATCCACCCCGGC-CACCCTGTCC--TATAAGGGTGCTTG-TCTTCAAGAA  46

seq1  ATGGAGACTCAGCCACAAGCCTCCTCTAAGCCTCCCCCTTTCCTATCTCA  100
       |||| | |||||| |||||||||| | |||||||||||| |||||||||
seq2  GTGGA-AGTCAGCCCCAAGCCTCCT-TTAGCCTCCCCCTTCCCTATCTCA  94

seq1  ACACTGTATATCAAGCCCGAACCCCA-CCAGCAACA-CACATGGCCAGGC  148
      || ||||||||| || |||| ||||| ||||||||| ||||| |||||||
seq2  AC-CTGTATATCCAG-CCGACCCCCACCCAGCAACACCACAT-GCCAGGC  141

seq1  AGTTAGCTCAGCCAATCCCTGCCTTCAATCCTCAGCCCCGGTACACCAGG  198
      || |||||||||||   |||||||||||| ||||||||| ||||||||||
seq2  AG-TAGCTCAGCCA--TCCTGCCTTCAAT-CTCAGCCCC-GTACACCAGG  186

seq1  TTTGAGAATCACTTTCTTGTAGATCCTGCTTCTGATCCACTGGGGCAGGG  248
       ||||| ||||||||| |||||||||||| ||||||||||||||||||||
seq2  -TTGAG-ATCACTTTC-TGTAGATCCTGC-TCTGATCCACTGGGGCAGGG  232

seq1  CCGGGTTGGAAGATCCTGGGGAGGGAATATGAGGGCAGGACCTCTCCCCA  298
      ||||||||  ||||||| ||||||||||||||||||||||||||||||||
seq2  CCGGGTTG--AGATCCT-GGGAGGGAATATGAGGGCAGGACCTCTCCCCA  279

seq1  GAGGGGAGAGGATAGCATGCCTTGGGGCATGACCTAGCAGGGGGAAAGCA  348
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GA-GGGAGAGGATAGCATGCCTTGGGGCATGACCTAGCAGGGGGAAAGCA  328

seq1  CACTGTGGGCGGGAGGGGTGGTGCCTCGGCTGGCGGGGAGGGGGGGCGTG  398
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CACTGTGGGCGGGAGGGGTGGTGCCTCGGCTGGC-GGGAGGGGGGGCGTG  377

seq1  TTTTATGTCTGGGAGCGGGACCTGATGGGTGGGTTTTCAGCCTGGGGGCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTCTGGGAGCGGGACCTGATGGGTGGGTTTTCAGCCTGGGGGCG  427

seq1  GGGCCTTGTCAGGGCAGAGTTGGAGAGGGTCACTTACTGTGGTCATCTCG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTGTCAGGGCAGAGTTGGAGAGGGTCACTTACTGTGGTCATCTCG  477

seq1  GAGTGCCGAGTCGATGAAGGCCGCAGCGGAGTAGAAAAAGATGCTGAGGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCGAGTCGATGAAGGCCGCAGCGGAGTAGAAAAAGATGCTGAGGT  527

seq1  CGAAGGTGGGCACGTCGTCGGCCTCGACGCCGTGGTACTCGATGGCCATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGTGGGCACGTCGTCGGCCTCGACGCCGTGGTACTCGATGGCCATG  577

seq1  TCTCGGTAGTAGTCCGGCCCGGTGTCCACATTCCAGCGGCCGTGCGCCGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGTAGTAGTCCGGCCCGGTGTCCACATTCCAGCGGCCGTGCGCCGC  627

seq1  GTTCAGCACGTGCGTGAAACCCGCCTTCTGCAGCCCATAGCGGTCCAGCG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCACGTGCGTGAAACCCGCCTTCTGCAGCCCATAGCGGTCCAGCG  677

seq1  CCGTGGCCCTGGGCGCAGGGAGAAGGGTCGGTCGGTTGGTGGACGCCGCG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGCCCTGGGCGCAGGGAGAAGGGTCGGTCGGTTGGTGGACGCCGCG  727

seq1  CTTTGGGTGGTGCACGGCTTTCAACGCTGGACCCAGTAATCGCAGGGAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGTGGTGCACGGCTTTCAACGCTGGACCCAGTAATCGCAGGGAGA  777

seq1  TTACAGGCAAAGACCCAAAGCAGCGCTCTTCCCGAGCCCCAGGCCACTGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCAAAGACCCAAAGCAGCGCTCTTCCCGAGCCCCAGGCCACTGG  827

seq1  GCACCGTTTGGTTTCATGACTATAAGAAAGCTACCATCTGCCCAGCCCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCGTTTGGTTTCATGACTATAAGAAAGCTACCATCTGCCCAGCCCTG  877

seq1  GGTAGGCGCAGTCTGGGCATTTGCCCTTTCCCTTTGGATCATTCACCTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCGCAGTCTGGGCATTTGCCCTTTCCCTTTGGATCATTCACCTTA  927

seq1  CGCTGCAGGTCCTGGAGGTGGACCTGTCAGATCTCCCCAAAGGCAACTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCAGGTCCTGGAGGTGGACCTGTCAGATCTCCCCAAAGGCAACTGA  977

seq1  AACACAATCTGTTCCTCTGAGCCTGCTTCACAGAGCCCCTGGGAGAACCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAATCTGTTCCTCTGAGCCTGCTTCACAGAGCCCCTGGGAGAACCT  1027

seq1  TTAAAAGAGGCCCCTGTTCTGTAGCTTCCAAACATTAATGGGTTTGGAGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGAGGCCCCTGTTCTGTAGCTTCCAAACATTAATGGGTTTGGAGG  1077

seq1  TCATAGCTGGGGAAAATGCTTCAAATCGGTGTTTCAGAGGATTTTGTTGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCTGGGGAAAATGCTTCAAATCGGTGTTTCAGAGGATTTTGTTGG  1127

seq1  GATTAGATAGAATTC  1163
      |||||||||||||||
seq2  GATTAGATAGAATTC  1142