BAC Information

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BAC

Clone NameB6Ng01-121H22
Chromosome14 (Build37)
Map Location 81,061,368 - 81,183,716
singlet/doubletdoublet
Overlap genenone
Upstream geneLect1, Pcdh8, EG629734, Olfm4, LOC672828
Downstream geneLOC639207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121H22.bB6Ng01-121H22.g
ACCDH925164DH925165
length4291,112
definitionDH925164|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H22, 5' end.DH925165|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,061,368 - 81,061,802)(81,182,589 - 81,183,716)
sequence
tgccttctaaattatgggtttgtaagagtggcaaagtgttcttttttaat
catatgaagactgtctgtatgtctcttgacccagcttgagagactgacac
agcatatgcaaatatcacatttctttttctatctgaaatctttgccattt
tatctttctaaggaagataatttttttcctttttattctgtgatttggat
cttaatcactatccttattattgcttgagaatgaaagggaaagtactatt
ctcttgagatgagaaggcacaaagctctaagcctctgctggagtgtcacc
acacaatactgtattttctgactcccattaaatgctgatgggtggctctg
aggatccaaagcctggagatttgtggtgagtgtggaaacttattctttgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcttcctattaatcaggctacatgtgggtgggcaaaacaagtgcac
agaacatatttagattgtggcatggaaaatgcttagtgtgaaaatctgta
ttaatattccaattattttctctcaagtctctgaagcctaagtggataaa
atatcttttgcatttcttccactgctttgtacagaagaccgtatatgggc
ctcctaggtgagcttggtgctgggccagcttcctttgttctcagaactat
tcatagaagttttgcatgtttaattatgtaattaaataaaagttaagctg
gtgaaacaacagtctaaaatagaaatgtcttgctttgtgagaattattat
gaatttttaggaaaatcacgtggaaggtgtgctagaaaaaagaaaggaaa
gaaaaagtggaaagaagtgaagctcttaaattagttgtgagtgaattaca
agaagagacaagctatggaaggcgtttctttgggtgtcatcttcacaagt
tcccgtgtctcccaggagtgaaaaaacaaaaacaaaacaacaaaacaaaa
tcctccaataatattattggatgctaggcaagcactgcctgtgcaagcaa
agtaaaaccaaaaaaagagaaagttctcatctcttcactgaaatgtaagt
gaataccacaggcacacacatacacatgcacatacacatacatacataca
catacatgtacatacaaaaaacactcatatgcacatacacaaacatacca
tacttctcttcactcaaatggaagtgaataccacaggcacatacacatgc
acatacatgcacacacacacatacatacacatgggatgtacacacaaaaa
acacacttatagacatacacaaacagaccatacacacatacacacaccac
caccacaccactacgcaccaccccagtctcaatattatatacattgagtt
tatttatgtaacaattttaaaatttgaagaaagcaggagaagccacatgg
gagaattagaaggtaggaatgggctagaaatggtttaattttttacaatc
tcaaaaagaaataacataaaagcaaacacaaaaaatagattctgaatgaa
ttctggttgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81061368_81061802
seq2: B6Ng01-121H22.b_50_484

seq1  GAATTCTGCCTTCTAAATTATGGGTTTGTAAGAGTGGCAAAGTGTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTTCTAAATTATGGGTTTGTAAGAGTGGCAAAGTGTTCTTT  50

seq1  TTTAATCATATGAAGACTGTCTGTATGTCTCTTGACCCAGCTTGAGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCATATGAAGACTGTCTGTATGTCTCTTGACCCAGCTTGAGAGAC  100

seq1  TGACACAGCATATGCAAATATCACATTTCTTTTTCTATCTGAAATCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGCATATGCAAATATCACATTTCTTTTTCTATCTGAAATCTTTG  150

seq1  CCATTTTATCTTTCTAAGGAAGATAATTTTTTTCCTTTTTATTCTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTATCTTTCTAAGGAAGATAATTTTTTTCCTTTTTATTCTGTGAT  200

seq1  TTGGATCTTAATCACTATCCTTATTATTGCTTGAGAATGAAAGGGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATCTTAATCACTATCCTTATTATTGCTTGAGAATGAAAGGGAAAGT  250

seq1  ACTATTCTCTTGAGATGAGAAGGCACAAAGCTCTAAGCCTCTGCTGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTCTTGAGATGAGAAGGCACAAAGCTCTAAGCCTCTGCTGGAGT  300

seq1  GTCACCACACAATACTGTATTTTCTGACTCCCATTAAATGCTGATGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACACAATACTGTATTTTCTGACTCCCATTAAATGCTGATGGGTG  350

seq1  GCTCTGAGGATCCAAAGCCTGGAGATTTGTGGTGAGTGTGGAAACTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAGGATCCAAAGCCTGGAGATTTGTGGTGAGTGTGGAAACTTATT  400

seq1  CTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  435
      |||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  435

seq1: chr14_81182589_81183716
seq2: B6Ng01-121H22.g_66_1177 (reverse)

seq1  TAGCAACAGGAATTCTATTCAGAAATTCCTTATTTTGTGTTTTGCTTTTA  50
      |||||||  |||||| ||||||||  ||  | ||||||| ||||||||||
seq2  TAGCAACCAGAATTC-ATTCAGAA--TCTATTTTTTGTG-TTTGCTTTTA  46

seq1  TGGTTATTTTCTTTTTTGAGATTGTAATATAATTATACCATTTTCTAGCC  100
      | |||||||   ||||||||||||||| | ||||| |||| |||||||||
seq2  T-GTTATTT--CTTTTTGAGATTGTAA-AAAATTAAACCA-TTTCTAGCC  91

seq1  CATTCCCTACCTTCTAATTCTCCCATGT-GCTTCTCCTTGCTGTCTTTCA  149
      |||| ||||||||||||||||||||||| |||||||| |||| || ||||
seq2  CATT-CCTACCTTCTAATTCTCCCATGTGGCTTCTCC-TGCTTTC-TTCA  138

seq1  AATTTTTAAAATTGTTACATAAATAAAACTCAATTGTATAATAATATTGA  199
      || ||||||||||||||||||||| |||||||| ||||| ||||||||||
seq2  AA-TTTTAAAATTGTTACATAAAT-AAACTCAA-TGTAT-ATAATATTGA  184

seq1  GACTGGGGTGGTGGCGGTAGTGGTGGTGGTGGTGGTGTGTGTATGTGTGT  249
      |||||||||||||   |||||||| |||||||||||||||||||||||||
seq2  GACTGGGGTGGTG--CGTAGTGGT-GTGGTGGTGGTGTGTGTATGTGTGT  231

seq1  ATGGTCTGTTTGTGTATGTCTATAAGTGTGTTTTTTGTGTGTACAT-CCA  298
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGGTCTGTTTGTGTATGTCTATAAGTGTGTTTTTTGTGTGTACATCCCA  281

seq1  TGTGTATGTATGTGTGTGTGTGCATGTATGTGCATGTGTATGTGCCTGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTATGTGTGTGTGTGCATGTATGTGCATGTGTATGTGCCTGTG  331

seq1  GTATTCACTTCCATTTGAGTGAAGAGAAGTATGGTATGTTTGTGTATGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCACTTCCATTTGAGTGAAGAGAAGTATGGTATGTTTGTGTATGTG  381

seq1  CATATGAGTGTTTTTTGTATGTACATGTATGTGTATGTATGTATGTGTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAGTGTTTTTTGTATGTACATGTATGTGTATGTATGTATGTGTAT  431

seq1  GTGCATGTGTATGTGTGTGCCTGTGGTATTCACTTACATTTCAGTGAAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTGTATGTGTGTGCCTGTGGTATTCACTTACATTTCAGTGAAGA  481

seq1  GATGAGAACTTTCTC-TTTTTTGGTTTTACTTTGCTTGCACAGGCAGTGC  547
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GATGAGAACTTTCTCTTTTTTTGGTTTTACTTTGCTTGCACAGGCAGTGC  531

seq1  TTGCCTAGCATCCAATAATATTATTGGAGGATTTTGTTTTGTTGTTTTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGCATCCAATAATATTATTGGAGGATTTTGTTTTGTTGTTTTGT  581

seq1  TTTTGTTTTTTCACTCCTGGGAGACACGGGAACTTGTGAAGATGACACCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTCACTCCTGGGAGACACGGGAACTTGTGAAGATGACACCC  631

seq1  AAAGAAACGCCTTCCATAGCTTGTCTCTTCTTGTAATTCACTCACAACTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACGCCTTCCATAGCTTGTCTCTTCTTGTAATTCACTCACAACTA  681

seq1  ATTTAAGAGCTTCACTTCTTTCCACTTTTTCTTTCCTTTCTTTTTTCTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAGCTTCACTTCTTTCCACTTTTTCTTTCCTTTCTTTTTTCTAG  731

seq1  CACACCTTCCACGTGATTTTCCTAAAAATTCATAATAATTCTCACAAAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTCCACGTGATTTTCCTAAAAATTCATAATAATTCTCACAAAGC  781

seq1  AAGACATTTCTATTTTAGACTGTTGTTTCACCAGCTTAACTTTTATTTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTTCTATTTTAGACTGTTGTTTCACCAGCTTAACTTTTATTTAA  831

seq1  TTACATAATTAAACATGCAAAACTTCTATGAATAGTTCTGAGAACAAAGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAATTAAACATGCAAAACTTCTATGAATAGTTCTGAGAACAAAGG  881

seq1  AAGCTGGCCCAGCACCAAGCTCACCTAGGAGGCCCATATACGGTCTTCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGCCCAGCACCAAGCTCACCTAGGAGGCCCATATACGGTCTTCTG  931

seq1  TACAAAGCAGTGGAAGAAATGCAAAAGATATTTTATCCACTTAGGCTTCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCAGTGGAAGAAATGCAAAAGATATTTTATCCACTTAGGCTTCA  981

seq1  GAGACTTGAGAGAAAATAATTGGAATATTAATACAGATTTTCACACTAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTGAGAGAAAATAATTGGAATATTAATACAGATTTTCACACTAAG  1031

seq1  CATTTTCCATGCCACAATCTAAATATGTTCTGTGCACTTGTTTTGCCCAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCATGCCACAATCTAAATATGTTCTGTGCACTTGTTTTGCCCAC  1081

seq1  CCACATGTAGCCTGATTAATAGGAAGAATTC  1128
      |||||||||||||||||||||||||||||||
seq2  CCACATGTAGCCTGATTAATAGGAAGAATTC  1112