BAC Information

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BAC

Clone NameB6Ng01-121K04
Chromosome14 (Build37)
Map Location 59,216,983 - 59,335,755
singlet/doubletdoublet
Overlap genenone
Upstream geneXpo4, Lats2, Sap18, F630043A04Rik, Mrp63, Zdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
Downstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46, Atp8a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121K04.bB6Ng01-121K04.g
ACCDH925270DH925271
length9791,082
definitionDH925270|Mus musculus domesticus DNA, BAC clone: B6Ng01-121K04, 5' end.DH925271|Mus musculus domesticus DNA, BAC clone: B6Ng01-121K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,335,131 - 59,335,755)(59,216,983 - 59,218,090)
sequence
gaattcactgcactgtgagaaatctggagccaaaaaaacatgccattgtt
tgtcctcaaagaagatagtatttagattttaaactctattaatgtatgct
ttactttaaatgttatatacacagtttgcaaaatgcaatatatggaaaaa
gccaagagactccttctgacgcatatacaaaacaaaggggaaatgtttta
ttcagaaaatgtgacgtaacagaacctgtcagttaagaatacttttgaaa
tgcttaaatttaactattaatataaataaaaatgtaccatagacctaaca
catagctaaagaacatattataaaaccatacattcaatgacaaattaaac
ccaacagcaaggaagctaggagacaaaagcacaaaatgacatgtgacaat
attcattaaaccttttaaactgtaaatgcaaaataaatgcaatattataa
tatatattcatgcatgtatactgctcaaattttttgtcactttgacacaa
gctagagcatctgagaggagaaaacctcaaatgagaaaatgcctccataa
tattcagctgtagggcattttcttaacaagtgactgatggagaagggctc
agcctactgtgtatagaacctctggcctgcggtcctgggttctataagaa
agcagactgagtaagaaaactgggagcaagccagtaaacagcactcttcc
atggtctctgcttcagttgttatgacaactttgatataataatttttgct
tcatgttactatattttttattttgtcacatttggttattatctctagga
aatctggtcttttctaatgagagacagaaagatctggaagggaaggaaat
ttgggaggaactgggaggagtagagggagaggaaacagtatttaggatat
attgtatttaaaaagaattcttttttataaataaaaaataaaaaagacta
aattttaaaatctcaaacccatagtctct
gaattctctatgagctttttttccagcatcagtcctttgaccttgttgct
tcccctttagtcctgtgctcatagtgaggcctctagtgccaggaacccgg
ggctccagcaaagtcacccatctcctcctctgagattgtctcagaggaca
actgggagagccaaaccttgtatacagaaagtcaacctgggccgtggaac
tgacaaagttatatttccggactcacctcattggtacctttccctgtcaa
gaacaagctatgtggcatatctatttgaccaggcacacactggaagatga
atctgttttatcaacatcattttaggggaggggcttagagaaggcactgt
gagtccccttcacctattaagaatggagacaatttacttgagcaagatct
tctcaaatctttatgcttcactaaaggaggcaataatattgcaatctgga
cccatcattggaagaaaaagatgctgtttaaaaagctatgcaacatgtgg
aatacacacacacacacacacacacacacacacacacatatatatattca
ataatgtattgagtattgccaggagaggcaggtatggcagtctgacaaca
cagatgaataccagtcagccaggtgggatgggggcaaggcactctgtttc
ctcacttgcaggagctagcatggagcacctacggaatactcattagtgta
aggctgaaggtgaggagctggtgagggttgctatagacaggaagagggac
atgcacaggtatcatgaagggccctgtgttgagctaatgagtgtcaactt
tatcctggaagcatcggagatccattgaaggaatttaagcaggggggggg
tgacatgatcagatctgcattttagaaaatagcagattgggcactgtgta
gagtagggattggagccatgccaggctggagacagcgagccagtatgagc
agtgtagtatccaggcagagtggtgagggcctgattatgtatgctttggg
gatcagagatggcgtgctctgatgatataagaaggagatctgctggctgt
tattggatgttggactaaggagacaaatctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_59335131_59335755
seq2: B6Ng01-121K04.b_48_672 (reverse)

seq1  CCAGAGGTTCTATACACAGTAGGCTGAGCCCTTCTCCATCAGTCACTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGTTCTATACACAGTAGGCTGAGCCCTTCTCCATCAGTCACTTGT  50

seq1  TAAGAAAATGCCCTACAGCTGAATATTATGGAGGCATTTTCTCATTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAATGCCCTACAGCTGAATATTATGGAGGCATTTTCTCATTTGAG  100

seq1  GTTTTCTCCTCTCAGATGCTCTAGCTTGTGTCAAAGTGACAAAAAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCCTCTCAGATGCTCTAGCTTGTGTCAAAGTGACAAAAAATTTG  150

seq1  AGCAGTATACATGCATGAATATATATTATAATATTGCATTTATTTTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTATACATGCATGAATATATATTATAATATTGCATTTATTTTGCAT  200

seq1  TTACAGTTTAAAAGGTTTAATGAATATTGTCACATGTCATTTTGTGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTTAAAAGGTTTAATGAATATTGTCACATGTCATTTTGTGCTTT  250

seq1  TGTCTCCTAGCTTCCTTGCTGTTGGGTTTAATTTGTCATTGAATGTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTAGCTTCCTTGCTGTTGGGTTTAATTTGTCATTGAATGTATGG  300

seq1  TTTTATAATATGTTCTTTAGCTATGTGTTAGGTCTATGGTACATTTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATATGTTCTTTAGCTATGTGTTAGGTCTATGGTACATTTTTAT  350

seq1  TTATATTAATAGTTAAATTTAAGCATTTCAAAAGTATTCTTAACTGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTAATAGTTAAATTTAAGCATTTCAAAAGTATTCTTAACTGACAG  400

seq1  GTTCTGTTACGTCACATTTTCTGAATAAAACATTTCCCCTTTGTTTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTACGTCACATTTTCTGAATAAAACATTTCCCCTTTGTTTTGTA  450

seq1  TATGCGTCAGAAGGAGTCTCTTGGCTTTTTCCATATATTGCATTTTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCGTCAGAAGGAGTCTCTTGGCTTTTTCCATATATTGCATTTTGCAA  500

seq1  ACTGTGTATATAACATTTAAAGTAAAGCATACATTAATAGAGTTTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTATATAACATTTAAAGTAAAGCATACATTAATAGAGTTTAAAAT  550

seq1  CTAAATACTATCTTCTTTGAGGACAAACAATGGCATGTTTTTTTGGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATACTATCTTCTTTGAGGACAAACAATGGCATGTTTTTTTGGCTCC  600

seq1  AGATTTCTCACAGTGCAGTGAATTC  625
      |||||||||||||||||||||||||
seq2  AGATTTCTCACAGTGCAGTGAATTC  625

seq1: chr14_59216983_59218090
seq2: B6Ng01-121K04.g_67_1148

seq1  GAATTCTCTATGAGCTTTTTTTCCAGCATCAGTCCTTTGACCTTGTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATGAGCTTTTTTTCCAGCATCAGTCCTTTGACCTTGTTGCT  50

seq1  TCCCCTTTAGTCCTGTGCTCATAGTGAGGCCTCTAGTGCCAGGAACCCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTAGTCCTGTGCTCATAGTGAGGCCTCTAGTGCCAGGAACCCGG  100

seq1  GGCTCCAGCAAAGTCACCCATCTCCTCCTCTGAGATTGTCTCAGAGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGCAAAGTCACCCATCTCCTCCTCTGAGATTGTCTCAGAGGACA  150

seq1  ACTGGGAGAGCCAAACCTTGTATACAGAAAGTCAACCTGGGCCGTGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAGAGCCAAACCTTGTATACAGAAAGTCAACCTGGGCCGTGGAAC  200

seq1  TGACAAAGTTATATTTCCGGACTCACCTCATTGGTACCTTTCCCTGTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAGTTATATTTCCGGACTCACCTCATTGGTACCTTTCCCTGTCAA  250

seq1  GAACAAGCTATGTGGCATATCTATTTGACCAGGCACACACTGGAAGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCTATGTGGCATATCTATTTGACCAGGCACACACTGGAAGATGA  300

seq1  ATCTGTTTTATCAACATCATTTTAGGGGAGGGGCTTAGAGAAGGCACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTTATCAACATCATTTTAGGGGAGGGGCTTAGAGAAGGCACTGT  350

seq1  GAGTCCCCTTCACCTATTAAGAATGGAGACAATTTACTTGAGCAAGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCCTTCACCTATTAAGAATGGAGACAATTTACTTGAGCAAGATCT  400

seq1  TCTCAAATCTTTATGCTTCACTAAAGGAGGCAATAATATTGCAATCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATCTTTATGCTTCACTAAAGGAGGCAATAATATTGCAATCTGGA  450

seq1  CCCATCATTGGAAGAAAAAGATGCTGTTTAAAAAGCTATGCAACATGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCATTGGAAGAAAAAGATGCTGTTTAAAAAGCTATGCAACATGTGG  500

seq1  AATACACACACACACACACACACACACACACACACACATATATATATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACACACACACACACACACACACACACACACACATATATATATTCA  550

seq1  ATAATGTATTGAGTATTGCCAGGAGAGGCAGGTATGGCAGTCTGACAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATTGAGTATTGCCAGGAGAGGCAGGTATGGCAGTCTGACAACA  600

seq1  CAGATGAATACCAGTCAGCCAGGTGGGATGGGGGCAAGGCACTCTGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAATACCAGTCAGCCAGGTGGGATGGGGGCAAGGCACTCTGTTTC  650

seq1  CTCACTTGCAGGAGCTAGCATGGAGCACCTACGGAATACTCATTAGTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTGCAGGAGCTAGCATGGAGCACCTACGGAATACTCATTAGTGTA  700

seq1  AGGCTGAAGGTGAGGAGCTGGTGAGGGTTGCTATAGACAGGAAGAGGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAAGGTGAGGAGCTGGTGAGGGTTGCTATAGACAGGAAGAGGGAC  750

seq1  ATGCACAGGTATCATGAAGGGCCCTGTGTTGAGCTAATGAGTGTCAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAGGTATCATGAAGGGCCCTGTGTTGAGCTAATGAGTGTCAACTT  800

seq1  TATCCTGGAAGCATCGGAGATCCATTGAAGGAATTTAAGCAGGGGGGGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGGAAGCATCGGAGATCCATTGAAGGAATTTAAGCAGGGGGGGGG  850

seq1  TGACATGATCAGATCTGCATTTTAG-AAATAGCAGATTGGCAACTGTGTA  899
      ||||||||||||||||||||||||| ||||||||||||||  ||||||||
seq2  TGACATGATCAGATCTGCATTTTAGAAAATAGCAGATTGGGCACTGTGTA  900

seq1  GAGTAGGGATTGGAGCCATGCCAGGCTGGAGACAGCGAGCCCAGTTATGA  949
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  GAGTAGGGATTGGAGCCATGCCAGGCTGGAGACAGCGAG-CCAG-TATGA  948

seq1  GGCAGTTGTAGTAATCCAGGCAAGAAGTGGTGAGGGCCTGGATTAAGGTA  999
       |||| |||||| |||||||||   |||||||||||||| |||| | |||
seq2  -GCAG-TGTAGT-ATCCAGGCA--GAGTGGTGAGGGCCT-GATT-ATGTA  991

seq1  ATGGCTTTGGGGATCCAGAGAATGGCGTGGCTCTGAGTGGATATTAAGAA  1049
         ||||||||||| ||||| ||||||| |||||||   |||| ||||||
seq2  --TGCTTTGGGGAT-CAGAG-ATGGCGT-GCTCTGA--TGATA-TAAGAA  1033

seq1  GGAAGAATCTGCTGGGCTTGGTAATGTGATGTTGGGACTAAAGGAGGACA  1099
      |||   ||||||| ||||  || ||  |||||| ||||||    |||| |
seq2  GGA--GATCTGCT-GGCT--GTTATTGGATGTT-GGACTA----AGGAGA  1073

seq1  GAAATCTGG  1108
       ||||||||
seq2  CAAATCTGG  1082