BAC Information

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BAC

Clone NameB6Ng01-121O04
Chromosome14 (Build37)
Map Location 114,578,371 - 114,579,445
singlet/doubletsinglet
Overlap genenone
Upstream geneTpm3-rs7, LOC100043510, LOC382947
Downstream geneLOC668791, LOC100043821, LOC100043521, Gpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121O04.bB6Ng01-121O04.g
ACCDH925454DH925455
length1,0641,164
definitionDH925454|Mus musculus domesticus DNA, BAC clone: B6Ng01-121O04, 5' end.DH925455|Mus musculus domesticus DNA, BAC clone: B6Ng01-121O04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggtcagttatacttattcatttcacaacttttattttatttt
attggttttataatgtaatgaatccaggaagagcccacggcatggctcat
ataatgttctaaataagaaatcattttggactatagaaggccacatgaag
catgtttttcataaggtatgtaaaagtggccacatcttgtaaactaaact
cataaacagttgacatgatgtgcacagcactgagatttaccttactgggg
ctatagggaatttgaaaagccactggcacatgcaaaatcctggaatcaca
tgggccatgctctttggtggtgatgcaatagcagcagattctagcattta
ttatatccatcatgcatcaggaagaagcagcttagctaatatttgtaggc
gtcagtggtggaataaatgaaaatagcccctaaagtttcataaaaaatgc
cattattggggtgtggctctgctggaagaagtgtgagctttgagttttca
gaacttcaagacagacccgttgttacccatcaggaacgctgcctggggat
ccaggtgtagaactctcagctttctttccagcatgatatctgccgttttg
ctgccatgcttcctgccatgacaacaacaaactaaacctctggaccgtaa
gccagtcttgattaaatgtttttttttttttataagagttgccatggtca
tattgtctcttcacagcaatagaacactgatgaatacagggtctctatgg
taacagtctcagcctgctgtcctctatagggcagactctctggtaggtag
tttctgtacacattgtacagcatatacactcagatgaatgggagtcatta
acaatcctcctcccatgacatagtgcaggtcttgttataagtctgtgcta
ttccttgatatggccatgcccatgtcaatatacatgttcacttgggctta
acgtgttcccatatcatgatatttagaatggctgcatgttcagaagccct
tctgagaagcatagctcgctaatattttttacaatcttacaaatccctat
actgttatttcccc
gaattctttgttcagttctgagccccatttttttaatggggttatttgat
tttctggagcctaccttcttgagttctttatatatattggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc
tttttgtcttattgatggtgtcttttgccttgcataagctttgcagtttc
atgaggtcccatttggcaattctcgatcttacagcacaagccattgctgt
tctattcaggaattcttcccctgtgcccatatcttcaaggcgtttcccca
ctttttcctctataaattttagtgtctttggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataagaatggatctattca
cattatttctacatgataacaaccagttgtgtcagcaccatttgttgaaa
atgctgtctttcttccactggatggttttagatcccttgtcaaagatcaa
gtgaccatagatgtgtgggttcatttgtgggtcttcaattccattccatt
ggtctacttgtctgtcactgtaccagtaccatgcagtttttttatcacaa
ttgctctgtagtacagctttaggtcaggcatggtgagtccacccgaggtt
cttttatccttgagaagacttttttgctatcctaggttttttgttattcc
agatgaatttgcagattgctctttctaattccttgaagaattgagttgga
attttgagggggattgcattgaatctgtagattgcttttgacaagatagc
catttttacaatgttgatcctgccaatccatgagcatgggagatctttcc
atcttctgagatcttctttaatttctttcttcagagacttgaagttttat
catacagatctttacttcatagtagcgtcacgacatatattttatgttat
tgtgactatgagaaggtgttgtttccctaattcctttctcagcatgttta
ttatttgtgtagagaaaggacatgactgttgagttaatttatattcagct
attcactgagctatttatcagtaggaggtctctggtgacttaggccacta
taatacctacctatcatctgcaaaaggaaattggactatcttccatttgg
atatccctgtacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114578371_114579445
seq2: B6Ng01-121O04.b_45_1108

seq1  GAATTCCTGGTCAGTTATACTTATTCATTTCACAACTTTTATTTTATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTCAGTTATACTTATTCATTTCACAACTTTTATTTTATTTT  50

seq1  ATTGGTTTTATAATGTAATGAATCCAGGAAGAGCCCACGGCATGGCTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTTATAATGTAATGAATCCAGGAAGAGCCCACGGCATGGCTCAT  100

seq1  ATAATGTTCTAAATAAGAAATCATTTTGGACTATAGAAGGCCACATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTCTAAATAAGAAATCATTTTGGACTATAGAAGGCCACATGAAG  150

seq1  CATGTTTTTCATAAGGTATGTAAAAGTGGCCACATCTTGTAAACTAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTTCATAAGGTATGTAAAAGTGGCCACATCTTGTAAACTAAACT  200

seq1  CATAAACAGTTGACATGATGTGCACAGCACTGAGATTTACCTTACTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACAGTTGACATGATGTGCACAGCACTGAGATTTACCTTACTGGGG  250

seq1  CTATAGGGAATTTGAAAAGCCACTGGCACATGCAAAATCCTGGAATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGGAATTTGAAAAGCCACTGGCACATGCAAAATCCTGGAATCACA  300

seq1  TGGGCCATGCTCTTTGGTGGTGATGCAATAGCAGCAGATTCTAGCATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCATGCTCTTTGGTGGTGATGCAATAGCAGCAGATTCTAGCATTTA  350

seq1  TTATATCCATCATGCATCAGGAAGAAGCAGCTTAGCTAATATTTGTAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCCATCATGCATCAGGAAGAAGCAGCTTAGCTAATATTTGTAGGC  400

seq1  GTCAGTGGTGGAATAAATGAAAATAGCCCCTAAAGTTTCATAAAAAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGGTGGAATAAATGAAAATAGCCCCTAAAGTTTCATAAAAAATGC  450

seq1  CATTATTGGGGTGTGGCTCTGCTGGAAGAAGTGTGAGCTTTGAGTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTGGGGTGTGGCTCTGCTGGAAGAAGTGTGAGCTTTGAGTTTTCA  500

seq1  GAACTTCAAGACAGACCCGTTGTTACCCATCAGGAACGCTGCCTGGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCAAGACAGACCCGTTGTTACCCATCAGGAACGCTGCCTGGGGAT  550

seq1  CCAGGTGTAGAACTCTCAGCTTTCTTTCCAGCATGATATCTGCCGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGTAGAACTCTCAGCTTTCTTTCCAGCATGATATCTGCCGTTTTG  600

seq1  CTGCCATGCTTCCTGCCATGACAACAACAAACTAAACCTCTGGACCGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATGCTTCCTGCCATGACAACAACAAACTAAACCTCTGGACCGTAA  650

seq1  GCCAGTCTTGATTAAATGTTTTTTTTTTTTTATAAGAGTTGCCATGGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTTGATTAAATGTTTTTTTTTTTTTATAAGAGTTGCCATGGTCA  700

seq1  TATTGTCTCTTCACAGCAATAGAACACTGATGAATACAGGGTCTCTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTCTTCACAGCAATAGAACACTGATGAATACAGGGTCTCTATGG  750

seq1  TAACAGTCTCAGCCTGCTGTCCTCTATAGGGCAGACTCTCTGGTAGGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCTCAGCCTGCTGTCCTCTATAGGGCAGACTCTCTGGTAGGTAG  800

seq1  TTTCTGTACACATTGTACAGCATATACACTCAGATGAATGGGAGTCATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTACACATTGTACAGCATATACACTCAGATGAATGGGAGTCATTA  850

seq1  ACAATCCTCCTCCCATGACATAGTGCAGGTCTTGTTATAAGTCTGTGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCTCCTCCCATGACATAGTGCAGGTCTTGTTATAAGTCTGTGCTA  900

seq1  TTCCTTGATATGGCCATGCCCATGTCAAATATACATGTTCACTTGGGCTT  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTCCTTGATATGGCCATGCCCATGTC-AATATACATGTTCACTTGGGCTT  949

seq1  AACGTGTTCCCCATATTCATGATATTTAGAATGGCTGCCATGTTCAGAAG  1000
      |||||||| |||||| ||||||||||||||||||||| ||||||||||||
seq2  AACGTGTT-CCCATA-TCATGATATTTAGAATGGCTG-CATGTTCAGAAG  996

seq1  CCCTTCTGAGAAAGCATAGCTCGCTAATATTTTTTTACAAATCTTACAAA  1050
      |||||||||| |||||||||||||||||| |||||||| |||||||||||
seq2  CCCTTCTGAG-AAGCATAGCTCGCTAATA-TTTTTTAC-AATCTTACAAA  1043

seq1  TCCCTATTAACTGTTTATTTTCCCC  1075
      |||||||  |||| |||||| ||| 
seq2  TCCCTAT--ACTG-TTATTTCCCC-  1064