BAC Information

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BAC

Clone NameB6Ng01-122A08
Chromosome14 (Build37)
Map Location 66,855,096 - 67,011,069
singlet/doubletdoublet
Overlap genePtk2b, LOC100043676, Trim35, Stmn4
Upstream geneFzd3, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2
Downstream geneAdra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122A08.bB6Ng01-122A08.g
ACCDH925556DH925557
length1,098781
definitionDH925556|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A08, 5' end.DH925557|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,855,096 - 66,856,217)(67,010,293 - 67,011,069)
sequence
gaattcctaaaatgtttctgagtctacaaaggctgattagcctttaacca
ctgtgaagcgtttggaatgctgcagcctgagaccttagttacaattctct
ttggctatttttagccccacaaggagtcagacctgtatcatacctaatat
cctgataaacacattttaaaatctctggaacataataacaaaactcatat
cataccaatggaagggctaagaatcagttaccatctggggcctatggttg
aagttctcttatatggaggtaagccactcccttggtgtaacgttttaaat
gacttgatttataagtttctttgttctaggcccacaaaaactccatgaaa
ctgcttccacgttgggaaaatgtatttggagagatctaaatctatgttcc
tgagaacattcactcatattttggcttcagaataaactacccctgattct
ctttgagttcagagctgtccacccctccccacttccctcaacttggtgat
ttctctgcttctggttctaaagttgtggaacagaagcaggagtcacattg
tcttcccatgatgctgggaattgaaaccagacgttcattagctaggtgag
taaatgagccacacccccagatcaaccatgagaggctcagtgcttggggt
ttacaaatagggagtaaggctgggctcttgggtcccttctggttccattt
aaagtacctctggtctagaagagaacaaatcaactagtgtggcatgcttt
tcctgcagcacttggaagagctgatcttttcagccctaagagcatacaat
gagggcctccagggcctccaggaccttcttagggccatgttaaaccttat
tctgagtggatttaccagtgcatttcttgacggtactggcatttgaatgg
tgaactgtataaagcagatcaccctcttcaaggtgggtgggcctcatgca
gagttgaaggctgaagacaataccgaatcttccctgagtagaaagatccc
tcacacccccccaactccggctaagacttccaataggactcaggattttt
ctgcttttatcaaaccaagcatggtctcccttgtcttagcctgccagt
gaattcaagagcatcaagcagatggttagcacccctcattaggagtagga
gcttattcataaaatacagttattcatttcatttgacacacacaaaaaaa
tcaaacatggagaattgaaacataattccaaatagaccttttaaaaaagg
aacaggttttgtgattaaggtgaatgtaacatcctgtgttaccccaccta
atcttctattagttgggaatgttacctttgatgtaggctctgataatgag
tacaatgtttctagactcaaggctttcatttctgacccactgcaatggtg
acagtgagagtccttgctcgtaataaagacccttatgtgtttgcattgga
attggctcctcaatggtctctggggtccctgtgacctggacataacatct
tggtgcattggctgagaaccctaagacccccagtactcccaaccaaaggg
acaggaggccagctggtaaagacatgcctcatttttggtctttgtgtcag
tgtcttgtctgtcagattcgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcg
cgcgcgccttgactgcctgatttttcttgattattcatggcaggagacaa
ctaaagcagacatgggaacctgtactggctagttttgtgtcaacttgaca
cagctggagttatcacagagaaaggagcttcagttgaggaaatgcctcca
tgagattccaactgtaaggcattttctcaattagtatcaagggggaaagg
cccctttgtggggtgggaccatctccgggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66855096_66856217
seq2: B6Ng01-122A08.b_47_1144

seq1  GAATTCCTAAAATGTTTCTGAGTCTACAAAGGCTGATTAGCCTTTAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAATGTTTCTGAGTCTACAAAGGCTGATTAGCCTTTAACCA  50

seq1  CTGTGAAGCGTTTGGAATGCTGCAGCCTGAGACCTTAGTTACAATTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAGCGTTTGGAATGCTGCAGCCTGAGACCTTAGTTACAATTCTCT  100

seq1  TTGGCTATTTTTAGCCCCACAAGGAGTCAGACCTGTATCATACCTAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTATTTTTAGCCCCACAAGGAGTCAGACCTGTATCATACCTAATAT  150

seq1  CCTGATAAACACATTTTAAAATCTCTGGAACATAATAACAAAACTCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAAACACATTTTAAAATCTCTGGAACATAATAACAAAACTCATAT  200

seq1  CATACCAATGGAAGGGCTAAGAATCAGTTACCATCTGGGGCCTATGGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAATGGAAGGGCTAAGAATCAGTTACCATCTGGGGCCTATGGTTG  250

seq1  AAGTTCTCTTATATGGAGGTAAGCCACTCCCTTGGTGTAACGTTTTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCTTATATGGAGGTAAGCCACTCCCTTGGTGTAACGTTTTAAAT  300

seq1  GACTTGATTTATAAGTTTCTTTGTTCTAGGCCCACAAAAACTCCATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGATTTATAAGTTTCTTTGTTCTAGGCCCACAAAAACTCCATGAAA  350

seq1  CTGCTTCCACGTTGGGAAAATGTATTTGGAGAGATCTAAATCTATGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCACGTTGGGAAAATGTATTTGGAGAGATCTAAATCTATGTTCC  400

seq1  TGAGAACATTCACTCATATTTTGGCTTCAGAATAAACTACCCCTGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACATTCACTCATATTTTGGCTTCAGAATAAACTACCCCTGATTCT  450

seq1  CTTTGAGTTCAGAGCTGTCCACCCCTCCCCACTTCCCTCAACTTGGTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGTTCAGAGCTGTCCACCCCTCCCCACTTCCCTCAACTTGGTGAT  500

seq1  TTCTCTGCTTCTGGTTCTAAAGTTGTGGAACAGAAGCAGGAGTCACATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCTTCTGGTTCTAAAGTTGTGGAACAGAAGCAGGAGTCACATTG  550

seq1  TCTTCCCATGATGCTGGGAATTGAAACCAGACGTTCATTAGCTAGGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCATGATGCTGGGAATTGAAACCAGACGTTCATTAGCTAGGTGAG  600

seq1  TAAATGAGCCACACCCCCAGATCAACCATGAGAGGCTCAGTGCTTGGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGCCACACCCCCAGATCAACCATGAGAGGCTCAGTGCTTGGGGT  650

seq1  TTACAAATAGGGAGTAAGGCTGGGCTCTTGGGTCCCTTCTGGTTCCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATAGGGAGTAAGGCTGGGCTCTTGGGTCCCTTCTGGTTCCATTT  700

seq1  AAAGTACCTCTGGTCTAGAAGAGAACAAATCAACTAGTGTGGCATGCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACCTCTGGTCTAGAAGAGAACAAATCAACTAGTGTGGCATGCTTT  750

seq1  TCCTGCAGCACTTGGAAGAGCTGATCTTTTCAGCCCTAAGAGCATACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCAGCACTTGGAAGAGCTGATCTTTTCAGCCCTAAGAGCATACAAT  800

seq1  GAGGGCCTCCAGGGCCTCCAGGACCTTCTTAGGGCCATGTTAAACCTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCTCCAGGGCCTCCAGGACCTTCTTAGGGCCATGTTAAACCTTAT  850

seq1  TCTGAGTGGATTTACCAGTGCATTTCTTGACGGTACTGGCATTTGAATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTGGATTTACCAGTGCATTTCTTGACGGTACTGGCATTTGAATGG  900

seq1  TGAACTGTATAAAGCAGATCACCCTCTTCAAGGTGGGTGGGCCTCATGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGTATAAAGCAGATCACCCTCTTCAAGGTGGGTGGGCCTCATGCA  950

seq1  AGAAGTTGAAGGCCTGAAGAACAAATACCGAATCTTCCCTGAGTAAGAAA  1000
         ||||||||| |||||||   ||||||||||||||||||||| |||||
seq2  --GAGTTGAAGG-CTGAAGA--CAATACCGAATCTTCCCTGAGT-AGAAA  994

seq1  GAATCCCCTCACACCCCCCCCCCCCCCCCCCGCCTAAAGACCTCCCAGAT  1050
      ||   ||||||||     |||||||  | ||| || ||||| |||   ||
seq2  GA--TCCCTCACA-----CCCCCCCAACTCCGGCT-AAGACTTCC--AAT  1034

seq1  AGGACTCAGGATTTTTCTGTCTTTTAATCAAAACCAAAGCATGGGTTCTC  1100
      ||||||||||||||||||| ||||| ||||||  | ||||||||  ||||
seq2  AGGACTCAGGATTTTTCTG-CTTTT-ATCAAA--CCAAGCATGG--TCTC  1078

seq1  CCTTGGTCTTAAGCCTGCCAGT  1122
      |||| ||||| |||||||||||
seq2  CCTT-GTCTT-AGCCTGCCAGT  1098

seq1: chr14_67010293_67011069
seq2: B6Ng01-122A08.g_69_849 (reverse)

seq1  AGCCCGGAGATGGTCCCA-CCCAC-AAGGGGCCTTTCCCCCTTGATACTA  48
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  AGCCCGGAGATGGTCCCACCCCACAAAGGGGCCTTTCCCCCTTGATACTA  50

seq1  ATTGAGAAAATGCCTTACAGTTGG-ATCTCATGGAGGCATTTCCTCAACT  97
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATTGAGAAAATGCCTTACAGTTGGAATCTCATGGAGGCATTTCCTCAACT  100

seq1  GAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAAC  150

seq1  TAGCCAGTACAGGTT-CCATGTCTGCTTTAGTTGTCTCCTGCCATGAATA  196
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAGCCAGTACAGGTTCCCATGTCTGCTTTAGTTGTCTCCTGCCATGAATA  200

seq1  ATCAAGAAAAATCAGGCAGTCAAGGCGCGCGCGCGCGCACACACACACAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAAAAATCAGGCAGTCAAGGCGCGCGCGCGCGCACACACACACAC  250

seq1  ACACACACACACGAATCTGACAGACAAGACACTGACACAAAGACCAAAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACGAATCTGACAGACAAGACACTGACACAAAGACCAAAAA  300

seq1  TGAGGCATGTCTTTACCAGCTGGCCTCCTGTCCCTTTGGTTGGGAGTACT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCATGTCTTTACCAGCTGGCCTCCTGTCCCTTTGGTTGGGAGTACT  350

seq1  GGGGGTCTTAGGGTTCTCAGCCAATGCACCAAGATGTTATGTCCAGGTCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTCTTAGGGTTCTCAGCCAATGCACCAAGATGTTATGTCCAGGTCA  400

seq1  CAGGGACCCCAGAGACCATTGAGGAGCCAATTCCAATGCAAACACATAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACCCCAGAGACCATTGAGGAGCCAATTCCAATGCAAACACATAAG  450

seq1  GGTCTTTATTACGAGCAAGGACTCTCACTGTCACCATTGCAGTGGGTCAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTATTACGAGCAAGGACTCTCACTGTCACCATTGCAGTGGGTCAG  500

seq1  AAATGAAAGCCTTGAGTCTAGAAACATTGTACTCATTATCAGAGCCTACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAGCCTTGAGTCTAGAAACATTGTACTCATTATCAGAGCCTACA  550

seq1  TCAAAGGTAACATTCCCAACTAATAGAAGATTAGGTGGGGTAACACAGGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTAACATTCCCAACTAATAGAAGATTAGGTGGGGTAACACAGGA  600

seq1  TGTTACATTCACCTTAATCACAAAACCTGTTCCTTTTTTAAAAGGTCTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATTCACCTTAATCACAAAACCTGTTCCTTTTTTAAAAGGTCTAT  650

seq1  TTGGAATTATGTTTCAATTCTCCATGTTTGATTTTTTTGTGTGTGTCAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTATGTTTCAATTCTCCATGTTTGATTTTTTTGTGTGTGTCAAA  700

seq1  TGAAATGAATAACTGTATTTTATGAATAAGCTCCTACTCCTAATGAGGGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAATAACTGTATTTTATGAATAAGCTCCTACTCCTAATGAGGGG  750

seq1  TGCTAACCATCTGCTTGATGCTCTTGAATTC  777
      |||||||||||||||||||||||||||||||
seq2  TGCTAACCATCTGCTTGATGCTCTTGAATTC  781