BAC Information

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BAC

Clone NameB6Ng01-123F02
Chromosome14 (Build37)
Map Location 15,975,798 - 16,138,962
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
Downstream geneLrrc3b, LOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123F02.bB6Ng01-123F02.g
ACCDH926515DH926516
length1,046799
definitionDH926515|Mus musculus domesticus DNA, BAC clone: B6Ng01-123F02, 5' end.DH926516|Mus musculus domesticus DNA, BAC clone: B6Ng01-123F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,975,798 - 15,976,844)(16,138,165 - 16,138,962)
sequence
gaattccaatgggctgagatgggagagaggagtgtacccctagtggttaa
gcactgctaagatctattaaaaatcacttagtggtaatgataagttgttt
acattctctctataagcaaatctccttctgatgtttgtttttctgtacat
aagcaaaaaccttggatcagtataagtgaatttctcagcggcaggtgtgt
gactctccctcattgccttgcctgcctagaacaaaagggctgtcaatcag
gcaggctagccttatgcgtgcagcagctggcctacatactccatgcaacc
ttgaggaaacaatatagtaatcaatatggtttcctcagttcccgaaagtg
ttttagagttgcctgaaaaagtttgtccagacatttgctatcatggtcct
cagtgaactctgaccttactgtgttttccctctggaacaggggtgggcac
tagcaggactgctgaaattggttataaagaagaaaggcattgtttggaac
agacacaaaattttacttaatataagtcttcatttgcatgtgagaattat
tgtgattggagcaaaacaaaccttaatttgtgtatgagatatgctgtgat
tcattcaaatgttgctactctgatcatgcaagcaggttacttgggcttac
ttggtgaggtggctgggagatagatggtcctttatgttgcctgtcctgct
ttttgcaaccataggctcaatcaaaggcttctctgttcagtattctctct
cctcttcttagtattgtgaactggcctggatgcattaaaaagaagcagca
gaggcataaagctagttggcagcttggtcaagcttgggtcaagctgaaat
aagcagattggtcagctgaagagtggcctaaacaatgtggcaaatgccgg
ggaaaggggcaatggaagtagagttacagcaagataaatcatgagctggg
gctgaagattggaaggagccagaagagaaaaaggaaaggctttattgctg
ggactgtccagaggcttcaagggcctttacaattctcataccaaga
gaattccttgaacgaacagaataataagatattgatgggactcacacaaa
gtgatgggtatctgccctgctaagatttggtgtttttggcaaagtagccg
caaaaaagcctggaaatatagttcagttcaggcccctcatagagtctcta
gtgcccacgtagccatccacaggaattgaagacaggaccagttgcttaat
gacgtaattctgaaggattcttcaagtttgagaattttgaaaacaaatgc
agacacgaataagacaattgctatattaatgtgttgttcgaaatatattc
ttgattgtttaaagagtttgtactgtttaaacaaatcttgccgttgagag
gagcatctctgcttcctgataacacagatgtatctctgggagcctcttga
gtcacttgctgtctaaaacatctggccaataatacagaacagcactctgt
tcacatgagttagtttacattacacatttgaacagagattttaatacatt
gaactattttcttgtcactttttaatctagagaaatgtaatgtataaatt
tacagactgagattaaattatttgagtttaaaactaataatttcaaacag
gacagagtattagttgaagtccctttgaatgtgaaaaatttatatttttc
taattttgaacatacaagatcaactatgttccagttgtataaccacacat
ataagagagtatagggagaactagttggtttataaaaaaaaaaaaaaaaa
acaacaatgaggacccaaagtttgtgtgaacatggaatggtggtggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15975798_15976844
seq2: B6Ng01-123F02.b_50_1095

seq1  GAATTCCAATGGGCTGAGATGGGAGAGAGGAGTGTACCCCTAGTGGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGGGCTGAGATGGGAGAGAGGAGTGTACCCCTAGTGGTTAA  50

seq1  GCACTGCTAAGATCTATTAAAAATCACTTAGTGGTAATGATAAGTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCTAAGATCTATTAAAAATCACTTAGTGGTAATGATAAGTTGTTT  100

seq1  ACATTCTCTCTATAAGCAAATCTCCTTCTGATGTTTGTTTTTCTGTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTCTCTATAAGCAAATCTCCTTCTGATGTTTGTTTTTCTGTACAT  150

seq1  AAGCAAAAACCTTGGATCAGTATAAGTGAATTTCTCAGCGGCAGGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAACCTTGGATCAGTATAAGTGAATTTCTCAGCGGCAGGTGTGT  200

seq1  GACTCTCCCTCATTGCCTTGCCTGCCTAGAACAAAAGGGCTGTCAATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCCCTCATTGCCTTGCCTGCCTAGAACAAAAGGGCTGTCAATCAG  250

seq1  GCAGGCTAGCCTTATGCGTGCAGCAGCTGGCCTACATACTCCATGCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTAGCCTTATGCGTGCAGCAGCTGGCCTACATACTCCATGCAACC  300

seq1  TTGAGGAAACAATATAGTAATCAATATGGTTTCCTCAGTTCCCGAAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAAACAATATAGTAATCAATATGGTTTCCTCAGTTCCCGAAAGTG  350

seq1  TTTTAGAGTTGCCTGAAAAAGTTTGTCCAGACATTTGCTATCATGGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAGTTGCCTGAAAAAGTTTGTCCAGACATTTGCTATCATGGTCCT  400

seq1  CAGTGAACTCTGACCTTACTGTGTTTTCCCTCTGGAACAGGGGTGGGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAACTCTGACCTTACTGTGTTTTCCCTCTGGAACAGGGGTGGGCAC  450

seq1  TAGCAGGACTGCTGAAATTGGTTATAAAGAAGAAAGGCATTGTTTGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGACTGCTGAAATTGGTTATAAAGAAGAAAGGCATTGTTTGGAAC  500

seq1  AGACACAAAATTTTACTTAATATAAGTCTTCATTTGCATGTGAGAATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAAAATTTTACTTAATATAAGTCTTCATTTGCATGTGAGAATTAT  550

seq1  TGTGATTGGAGCAAAACAAACCTTAATTTGTGTATGAGATATGCTGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGGAGCAAAACAAACCTTAATTTGTGTATGAGATATGCTGTGAT  600

seq1  TCATTCAAATGTTGCTACTCTGATCATGCAAGCAGGTTACTTGGGCTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAAATGTTGCTACTCTGATCATGCAAGCAGGTTACTTGGGCTTAC  650

seq1  TTGGTGAGGTGGCTGGGAGATAGATGGTCCTTTATGTTGCCTGTCCTGC-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGGTGAGGTGGCTGGGAGATAGATGGTCCTTTATGTTGCCTGTCCTGCT  700

seq1  TTTTGCAACCATAGGCTCAATCAAAGGC-TCTCTGTTCAGTATTCTCTCT  748
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTGCAACCATAGGCTCAATCAAAGGCTTCTCTGTTCAGTATTCTCTCT  750

seq1  CCTCTTCTTAGTATTGTGAACTGGCCTGGATGCA-TAAAAAGAAGCAGCA  797
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTCTTCTTAGTATTGTGAACTGGCCTGGATGCATTAAAAAGAAGCAGCA  800

seq1  GAGGCAGTAAAGCTAG-TGGCAGCTTGGTCAAGCTTGGGTCAAGCTGAAA  846
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGGCA-TAAAGCTAGTTGGCAGCTTGGTCAAGCTTGGGTCAAGCTGAAA  849

seq1  CTAGCAGATT-GTCAGCTGAAGAGTGG-CTAAACAATGTGGCAAATGCCG  894
        |||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  TAAGCAGATTGGTCAGCTGAAGAGTGGCCTAAACAATGTGGCAAATGCCG  899

seq1  GGG-AAGGGGCAATGGAAGTAGAGTTACAGCAAGAGAAATCAGTGAGCTG  943
      ||| ||||||||||||||||||||||||||||||| |||||| |||||||
seq2  GGGAAAGGGGCAATGGAAGTAGAGTTACAGCAAGATAAATCA-TGAGCTG  948

seq1  TGGCTGAAGAATGGAAGGAGCCAGAGAAGAGAAAGGACAGGCTTTGATTG  993
       ||||||||| ||||||||||||||  ||| |||||| ||||||| ||||
seq2  GGGCTGAAGATTGGAAGGAGCCAGAAGAGAAAAAGGAAAGGCTTT-ATTG  997

seq1  CTGGGACTGTTCCAGAGGGCTTTCAAGGGCTTTTACAAATTTCTCATATC  1043
      ||||||||| ||||||||   ||||||||| |||||||  |||||||| |
seq2  CTGGGACTG-TCCAGAGG--CTTCAAGGGCCTTTACAA--TTCTCATACC  1042

seq1  AAGA  1047
      ||||
seq2  AAGA  1046

seq1: chr14_16138165_16138962
seq2: B6Ng01-123F02.g_68_866 (reverse)

seq1  CATCCACCACCATTCCATGTTCACAC-AACTTTGGGTCCTCATTGTTGTT  49
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CATCCACCACCATTCCATGTTCACACAAACTTTGGGTCCTCATTGTTGTT  50

seq1  TTTTTTTTTTTTTTTTATAAACCAACTAGTTCTCCCTATACTCTCTTATA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTATAAACCAACTAGTTCTCCCTATACTCTCTTATA  100

seq1  TGTGTGGTTATACAACTGGAACATAGTTGATCTTGTATGTTCAAAATTAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTTATACAACTGGAACATAGTTGATCTTGTATGTTCAAAATTAG  150

seq1  AAAAATATAAATTTTTCACATTCAAAGGGACTTCAACTAATACTCTGTCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAAATTTTTCACATTCAAAGGGACTTCAACTAATACTCTGTCC  200

seq1  TGTTTGAAATTATTAGTTTTAAACTCAAATAATTTAATCTCAGTCTGTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAAATTATTAGTTTTAAACTCAAATAATTTAATCTCAGTCTGTAA  250

seq1  ATTTATACATTACATTTCTCTAGATTAAAAAGTGACAAGAAAATAGTTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACATTACATTTCTCTAGATTAAAAAGTGACAAGAAAATAGTTCA  300

seq1  ATGTATTAAAATCTCTGTTCAAATGTGTAATGTAAACTAACTCATGTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTAAAATCTCTGTTCAAATGTGTAATGTAAACTAACTCATGTGAA  350

seq1  CAGAGTGCTGTTCTGTATTATTGGCCAGATGTTTTAGACAGCAAGTGACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGCTGTTCTGTATTATTGGCCAGATGTTTTAGACAGCAAGTGACT  400

seq1  CAAGAGGCTCCCAGAGATACATCTGTGTTATCAGGAAGCAGAGATGCTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGCTCCCAGAGATACATCTGTGTTATCAGGAAGCAGAGATGCTCC  450

seq1  TCTCAACGGCAAGATTTGTTTAAACAGTACAAACTCTTTAAACAATCAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACGGCAAGATTTGTTTAAACAGTACAAACTCTTTAAACAATCAAG  500

seq1  AATATATTTCGAACAACACATTAATATAGCAATTGTCTTATTCGTGTCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTTCGAACAACACATTAATATAGCAATTGTCTTATTCGTGTCTG  550

seq1  CATTTGTTTTCAAAATTCTCAAACTTGAAGAATCCTTCAGAATTACGTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTTTCAAAATTCTCAAACTTGAAGAATCCTTCAGAATTACGTCA  600

seq1  TTAAGCAACTGGTCCTGTCTTCAATTCCTGTGGATGGCTACGTGGGCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAACTGGTCCTGTCTTCAATTCCTGTGGATGGCTACGTGGGCACT  650

seq1  AGAGACTCTATGAGGGGCCTGAACTGAACTATATTTCCAGGCTTTTTTGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCTATGAGGGGCCTGAACTGAACTATATTTCCAGGCTTTTTTGC  700

seq1  GGCTACTTTGCCAAAAACACCAAATCTTAGCAGGGCAGATACCCATCACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTTTGCCAAAAACACCAAATCTTAGCAGGGCAGATACCCATCACT  750

seq1  TTGTGTGAGTCCCATCAATATCTTATTATTCTGTTCGTTCAAGGAATTC  798
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGAGTCCCATCAATATCTTATTATTCTGTTCGTTCAAGGAATTC  799