BAC Information

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BAC

Clone NameB6Ng01-124D02
Chromosome14 (Build37)
Map Location 113,167,284 - 113,286,516
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043501, EG223186
Downstream geneLOC100043509, Tpm3-rs7, LOC100043510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124D02.bB6Ng01-124D02.g
ACCDH927163DH927164
length1,0931,127
definitionDH927163|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D02, 5' end.DH927164|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,285,415 - 113,286,516)(113,167,284 - 113,168,421)
sequence
gaattccacggcatcccagtgcaagagaatccgctcactgtttgtggggt
tccacttctattccttacaagcatcctaggccctttcaagtgtccagtgc
aggcaaacatcacacgccctctcacataactatttcagaaaaacatcctc
tcacaagtcagcttccagacaaacatcatgtgaaacaactgagtctctaa
agaaaccagaaattcccccttcaagtatacagtttttccaacatgtatgc
ttcattgagattatgctataggtaattatacgagttaaacatgttatttt
cctactcatacttcctgatagcaaaagtttatatattttataatagacaa
gctttcattcaacctaacacttcaaaaatacatatacaaatacctctttt
tatttttgttaatatccagtcttacatataaatatttatatccataataa
tttgtcttaaatacacagcttaatttcacagaaggtaccataattaaaaa
atatatctgttctttttctgagtcaactcacacctacttttgtaagatat
cattaattttctgaatttttctggaatctgttctcaagaaacctgccaac
gcttttaattcttattttaaacatattcaattccacccacctccctttca
gccaccctaattttcctctctcaatcattttcatcctgcctttctgattt
tctgaatattttcttttcaaatgcttcataagattgattaccctaatgtt
tgaacatatacatttgtatctatgtgcaacaaaacagacaatacatttat
aaaaaataattaggacaagaaatataaacattaacacctcccagtatagg
tttgtttagttcaaatttttctctgtttgtttggagaccataataggtca
ttactgtaaagctggagacattagctttcacttttacggttgaaaattta
ttttcatgtcactgggtaatatcttacgatgcttcttcatgcgttctcac
agttacttatattttaaagatttaatagtccaatataaaaagttttgcat
tctatttcacagaactgctatacaaacagctctcttctgtgct
gaattccttaaagataaattataaaattttctcatttagttctcatactc
tcccttttaatgttggttttataaactggctgtaataatcttttaattat
tactattaaacagagctaatcaatgtaatattattctgagtaccctgaag
atatttatgtgtgattcctctcaatattctcctttatcacaaagatgtgt
acatacaatcgccctccccacacatggcagtagaatgtataaatggtaga
actctgccccagcaaattatttattagaatgctcaagttgtctttactat
tcttagtttctcattaaacactaaaaatgactgtcttagcgatattctga
ggtggatctttctcatttctctttttctatggtgatttcacttgttctgt
tctgagctggtgcttgtaccggtataccagagcattctgacttaatcaca
aatcatacacatctctgcccaaattatttactttgaaaatgaatttctag
tgaaattttaagtacatactattttgcatttaatatcaacttattgtgag
gttttcagggatccagcttgatgtttaataataaagacatccagacatct
atatagtataagggtgttggccttttgcttggaagactctcagctaggca
acttctcagttagccaacttctctgccattgcatccctgcatgtggttcc
catggcctactccccatctctatcctgtctcccttttatcttccttctgt
gtctgtctgcatctcaatctgcttgctcattctgatagttctttctgtcc
ccacttcagcagacagatctttattaacaaaggccacattcctttctcat
acaaaaaaaaagttatagcatgatgggaaaccttgcactgctgactcatt
gtgagaggatccacagcaggactacactcagttcatatcatagtgtgcct
tttggccagattgaggtcaactctaccttctgtgacctcagtgccctcat
ccattcagcttgcttttccttttttttttttttttttggataggtagcca
tggacaatttacctacagaaaccatgtgattggtctaggagtgacatcca
ccaggtcctaccgcacagcaattacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113285415_113286516
seq2: B6Ng01-124D02.b_45_1137 (reverse)

seq1  AGCACAGAGGGAAGGAAGCTGTTTGGTATAGCAGTTCTGTGAAATAGAAT  50
      ||||||    ||||  |||||||| |||||||||||||||||||||||||
seq2  AGCACA----GAAGAGAGCTGTTT-GTATAGCAGTTCTGTGAAATAGAAT  45

seq1  GGCAAAAACTTTTTATATTGGACTATTTAAATCTTTAAAATATAAGTAAC  100
      |   ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  G--CAAAACTTTTTATATTGGACTA-TTAAATCTTTAAAATATAAGTAAC  92

seq1  TGTGAGAACGCATGGAAGAAGCATCGTAAGATATTACCCAGTGACATGAA  150
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAACGCAT-GAAGAAGCATCGTAAGATATTACCCAGTGACATGAA  141

seq1  AATAAATTTTCAACCGTAAAAGTTGAAGCTAATGTCTCCAGCTTTACAGT  200
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  AATAAATTTTCAACCGTAAAAGTGAAAGCTAATGTCTCCAGCTTTACAGT  191

seq1  AATGACCTATTATGGTCTCCAAACAAACAGAGAAAAATTTGAACTAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCTATTATGGTCTCCAAACAAACAGAGAAAAATTTGAACTAAACA  241

seq1  AACCTATACTGGGAGGTGTTAATGTTTATATTTCTTGTCCTAATTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATACTGGGAGGTGTTAATGTTTATATTTCTTGTCCTAATTATTTT  291

seq1  TTATAAATGTATTGTCTGTTTTGTTGCACATAGATACAAATGTATATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGTATTGTCTGTTTTGTTGCACATAGATACAAATGTATATGTT  341

seq1  CAAACATTAGGGTAATCAATCTTATGAAGCATTTGAAAAGAAAATATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTAGGGTAATCAATCTTATGAAGCATTTGAAAAGAAAATATTCA  391

seq1  GAAAATCAGAAAGGCAGGATGAAAATGATTGAGAGAGGAAAATTAGGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAGAAAGGCAGGATGAAAATGATTGAGAGAGGAAAATTAGGGTG  441

seq1  GCTGAAAGGGAGGTGGGTGGAATTGAATATGTTTAAAATAAGAATTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGGGAGGTGGGTGGAATTGAATATGTTTAAAATAAGAATTAAAA  491

seq1  GCGTTGGCAGGTTTCTTGAGAACAGATTCCAGAAAAATTCAGAAAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTGGCAGGTTTCTTGAGAACAGATTCCAGAAAAATTCAGAAAATTAA  541

seq1  TGATATCTTACAAAAGTAGGTGTGAGTTGACTCAGAAAAAGAACAGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCTTACAAAAGTAGGTGTGAGTTGACTCAGAAAAAGAACAGATAT  591

seq1  ATTTTTTAATTATGGTACCTTCTGTGAAATTAAGCTGTGTATTTAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAATTATGGTACCTTCTGTGAAATTAAGCTGTGTATTTAAGACA  641

seq1  AATTATTATGGATATAAATATTTATATGTAAGACTGGATATTAACAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTATGGATATAAATATTTATATGTAAGACTGGATATTAACAAAAA  691

seq1  TAAAAAGAGGTATTTGTATATGTATTTTTGAAGTGTTAGGTTGAATGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAGGTATTTGTATATGTATTTTTGAAGTGTTAGGTTGAATGAAA  741

seq1  GCTTGTCTATTATAAAATATATAAACTTTTGCTATCAGGAAGTATGAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCTATTATAAAATATATAAACTTTTGCTATCAGGAAGTATGAGTA  791

seq1  GGAAAATAACATGTTTAACTCGTATAATTACCTATAGCATAATCTCAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAACATGTTTAACTCGTATAATTACCTATAGCATAATCTCAATG  841

seq1  AAGCATACATGTTGGAAAAACTGTATACTTGAAGGGGGAATTTCTGGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATACATGTTGGAAAAACTGTATACTTGAAGGGGGAATTTCTGGTTT  891

seq1  CTTTAGAGACTCAGTTGTTTCACATGATGTTTGTCTGGAAGCTGACTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGACTCAGTTGTTTCACATGATGTTTGTCTGGAAGCTGACTTGT  941

seq1  GAGAGGATGTTTTTCTGAAATAGTTATGTGAGAGGGCGTGTGATGTTTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGATGTTTTTCTGAAATAGTTATGTGAGAGGGCGTGTGATGTTTGC  991

seq1  CTGCACTGGACACTTGAAAGGGCCTAGGATGCTTGTAAGGAATAGAAGTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGGACACTTGAAAGGGCCTAGGATGCTTGTAAGGAATAGAAGTG  1041

seq1  GAACCCCACAAACAGTGAGCGGATTCTCTTGCACTGGGATGCCGTGGAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCACAAACAGTGAGCGGATTCTCTTGCACTGGGATGCCGTGGAAT  1091

seq1  TC  1102
      ||
seq2  TC  1093

seq1: chr14_113167284_113168421
seq2: B6Ng01-124D02.g_67_1193

seq1  GAATTCCTTAAAGATAAATTATAAAATTTTCTCATTTAGTTCTCATACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAAGATAAATTATAAAATTTTCTCATTTAGTTCTCATACTC  50

seq1  TCCCTTTTAATGTTGGTTTTATAAACTGGCTGTAATAATCTTTTAATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTAATGTTGGTTTTATAAACTGGCTGTAATAATCTTTTAATTAT  100

seq1  TACTATTAAACAGAGCTAATCAATGTAATATTATTCTGAGTACCCTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTAAACAGAGCTAATCAATGTAATATTATTCTGAGTACCCTGAAG  150

seq1  ATATTTATGTGTGATTCCTCTCAATATTCTCCTTTATCACAAAGATGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATGTGTGATTCCTCTCAATATTCTCCTTTATCACAAAGATGTGT  200

seq1  ACATACAATCGCCCTCCCCACACATGGCAGTAGAATGTATAAATGGTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAATCGCCCTCCCCACACATGGCAGTAGAATGTATAAATGGTAGA  250

seq1  ACTCTGCCCCAGCAAATTATTTATTAGAATGCTCAAGTTGTCTTTACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCCCCAGCAAATTATTTATTAGAATGCTCAAGTTGTCTTTACTAT  300

seq1  TCTTAGTTTCTCATTAAACACTAAAAATGACTGTCTTAGCGATATTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTTCTCATTAAACACTAAAAATGACTGTCTTAGCGATATTCTGA  350

seq1  GGTGGATCTTTCTCATTTCTCTTTTTCTATGGTGATTTCACTTGTTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATCTTTCTCATTTCTCTTTTTCTATGGTGATTTCACTTGTTCTGT  400

seq1  TCTGAGCTGGTGCTTGTACCGGTATACCAGAGCATTCTGACTTAATCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCTGGTGCTTGTACCGGTATACCAGAGCATTCTGACTTAATCACA  450

seq1  AATCATACACATCTCTGCCCAAATTATTTACTTTGAAAATGAATTTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATACACATCTCTGCCCAAATTATTTACTTTGAAAATGAATTTCTAG  500

seq1  TGAAATTTTAAGTACATACTATTTTGCATTTAATATCAACTTATTGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTTAAGTACATACTATTTTGCATTTAATATCAACTTATTGTGAG  550

seq1  GTTTTCAGGGATCCAGCTTGATGTTTAATAATAAAGACATCCAGACATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGGGATCCAGCTTGATGTTTAATAATAAAGACATCCAGACATCT  600

seq1  ATATAGTATAAGGGTGTTGGCCTTTTGCTTGGAAGACTCTCAGCTAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTATAAGGGTGTTGGCCTTTTGCTTGGAAGACTCTCAGCTAGGCA  650

seq1  ACTTCTCAGTTAGCCAACTTCTCTGCCATTGCATCCCTGCATGTGGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCAGTTAGCCAACTTCTCTGCCATTGCATCCCTGCATGTGGTTCC  700

seq1  CATGGCCTACTCCCCATCTCTATCCTGTCTCCCTTTTATCTTCCTTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCTACTCCCCATCTCTATCCTGTCTCCCTTTTATCTTCCTTCTGT  750

seq1  GTCTGTCTGCATCTCAATCTGCTTGCTCATTCTGATAGTTCTTTCTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTGCATCTCAATCTGCTTGCTCATTCTGATAGTTCTTTCTGTCC  800

seq1  CCACTTCAGCAGACAGATCTTTATTTAACAAAGGCCACATTCCTTTCTCA  850
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCACTTCAGCAGACAGATCTTTA-TTAACAAAGGCCACATTCCTTTCTCA  849

seq1  TACAAAAAAAAAGTTATAGCATGATGGGAAACCTTGCACTGCTGACTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAAAAAGTTATAGCATGATGGGAAACCTTGCACTGCTGACTCAT  899

seq1  TGTGAGAGGATCCACAGCAGGACTACACTCAGTTCATATCATAGTGTTGC  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTGAGAGGATCCACAGCAGGACTACACTCAGTTCATATCATAGTG-TGC  948

seq1  CTTTTGGCCAGATTGAGGTCAACTCTACCTTCTGTGACCTTCAGTGCCCT  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTTTGGCCAGATTGAGGTCAACTCTACCTTCTGTGACC-TCAGTGCCCT  997

seq1  CATCCATTCAGCTTGCTTTTTCCTTTTTTTTTTTTTTTTTTTGAATAAGT  1050
      ||||||||||||||||||||  | ||||||||||||||||||| ||| ||
seq2  CATCCATTCAGCTTGCTTTT--CCTTTTTTTTTTTTTTTTTTGGATAGGT  1045

seq1  AAGCAAATGACAAATTTTACGTACAGAAACCATGTAATGGATCATAGAAA  1100
       ||| |  |||||  ||||| |||||||||||||| || | || ||| | 
seq2  -AGCCATGGACAA--TTTACCTACAGAAACCATGTGATTGGTC-TAGGAG  1091

seq1  TGACAATACCACATGTCCTACCAGCACAGCAATTACGA  1138
      |||| || |  || |||||||| |||||||||||||||
seq2  TGAC-ATCCACCAGGTCCTACC-GCACAGCAATTACGA  1127