BAC Information

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BAC

Clone NameB6Ng01-124F22
Chromosome14 (Build37)
Map Location 31,263,778 - 31,405,225
singlet/doubletdoublet
Overlap geneCacna1d, Dcp1a, Tkt
Upstream geneCacna2d3, EG665431, Selk, Actr8, Il17rb, Chdh, LOC665399
Downstream genePrkcd, EG665466, Rft1, Sfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124F22.bB6Ng01-124F22.g
ACCDH927296DH927297
length1,1501,075
definitionDH927296|Mus musculus domesticus DNA, BAC clone: B6Ng01-124F22, 5' end.DH927297|Mus musculus domesticus DNA, BAC clone: B6Ng01-124F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,263,778 - 31,264,925)(31,404,142 - 31,405,225)
sequence
gaattcaggacctctggaagagcagtaggtactcttaaccgctgagccat
ctctccagccccattaaaataatcttaaaacacggtctgctagtcctcac
cgactagcctttctgtgcctccccttccatgttagaaacttcaccaggca
tgctttaagagaaagacctttgaatggaggagtctagtagagaatgagta
ggccactgagaacactgcctttgaagggttaaagtcatactcttgggacc
catgacttgtctctcagaagagtaaatctgtcctttggttatttctttat
ggctccatgtcccaccacatgacctctcccctcacactcacattccatcc
gtagtaatgccacaaactgtgagatcttcactagagccaagctggtgcca
gtgacagtggcttgagtctctggcactatgacctcttcttgacaaagtgc
tcagcctcgggaattgtgttatagcaacaaaaatgcacaaatacacccac
ttccatttttctcagaggatgaaagttagttacttcatttttctatcccc
tgacggctggtcacatttctgtcagatatctacccaactgtggtgccctg
cctttggccctagcaacatgagatccgaggcctacaggtctcacagttca
cctttctctgtcctacactgttcttctcatgaaactgatctttgtccaat
tctttataatgcctaggccagtgataggtagctcatttgattgactctag
ggaggtagctgaggtgagggactggcttgaaaaaaaacacagaagaccgt
tttacagcaatgaaaacagtttacatcatgtttggagtggtattttcaat
ggctgtatatatttatcaacttttattgaactacactacaatctgcgcat
tgttcaaattttttaaacgttaggcaacaaaaaagtgacagttaaaaaac
atcatttcctaaaaaagtctcgctcaagtgtatcatgagctgatttagac
acatttcttcagtggccaccatggcggccttacaacacttttatcaccag
ctagctttatctttcttatactacacagcttgtggaccttatcttttatt
tgcctctaccttagggtgacaagcaggtctcctggtgtgtatccctaaca

gaattcagcagtgcatactgataaaaggtacatatctttcataccaagtt
cttagcaggggtcgcggttctggctgagtcctggaacccagttcccgggt
tagccacgtctaataacactgtcatcttggaggaggcccaggcatcatat
tttgaaagctctcctgatatgtatgtgcatcaggaccgagagcaagctag
gcgaggtaggaatctgcatattgcccagtgaagctaggaaaagctgccca
gaaagccacaccttggaaatcaagtcagcgctgccagaccagcccattgt
gtggaggagtattggcttctgagcccgtggagcactgctacgtgtctaag
acaacagacagaaaaaccgaggggtctgtgagatggccacttggcagggc
aacatcgcccactgcctggctgggctacatcgccccctggtggatgccat
cttgcaggcactgcagagactgcctaccatcagtcttcatgccagggaca
gtgctgaacactttaaacagtctctgactgctggggacccagagaaacat
aagcaataatatctctccttacataaacaattatctgttttgtctcagag
gatagtgttcatcctaacatggtgcccatagttcccaacaggtccccatt
aatgtatgtaggactgatgcgagtcggaggtccacattttctaatagaga
ggtttctaatagaggaaatgaggctgcattcagatttgccagtgtgggga
gggatccaaggacttcccatggctgcccttggcctgactttaccaggact
taaactttcagctctctctgggcacctgcttcactttgggaaccatcaaa
gctggacagggcttctgtacccctcctgacccccgactgtgtctgcgtag
caaatgacttggatgacgactgcttgtggaaacagagctgggtcaccttg
tttgctcttctgaatcttaccgcctgcccaaagccttttatcccttagga
aggaagccgcgctacgcagtatctgaatacactaagggaaccaggcatga
gaatgtctcaagtgggaagctggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_31263778_31264925
seq2: B6Ng01-124F22.b_46_1195

seq1  GAATTCAGGACCTCTGGAAGAGCAGTAGGTACTCTTAACCGCTGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCTGGAAGAGCAGTAGGTACTCTTAACCGCTGAGCCAT  50

seq1  CTCTCCAGCCCCATTAAAATAATCTTAAAACACGGTCTGCTAGTCCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCCCCATTAAAATAATCTTAAAACACGGTCTGCTAGTCCTCAC  100

seq1  CGACTAGCCTTTCTGTGCCTCCCCTTCCATGTTAGAAACTTCACCAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTAGCCTTTCTGTGCCTCCCCTTCCATGTTAGAAACTTCACCAGGCA  150

seq1  TGCTTTAAGAGAAAGACCTTTGAATGGAGGAGTCTAGTAGAGAATGAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAAGAGAAAGACCTTTGAATGGAGGAGTCTAGTAGAGAATGAGTA  200

seq1  GGCCACTGAGAACACTGCCTTTGAAGGGTTAAAGTCATACTCTTGGGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTGAGAACACTGCCTTTGAAGGGTTAAAGTCATACTCTTGGGACC  250

seq1  CATGACTTGTCTCTCAGAAGAGTAAATCTGTCCTTTGGTTATTTCTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTTGTCTCTCAGAAGAGTAAATCTGTCCTTTGGTTATTTCTTTAT  300

seq1  GGCTCCATGTCCCACCACATGACCTCTCCCCTCACACTCACATTCCATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCATGTCCCACCACATGACCTCTCCCCTCACACTCACATTCCATCC  350

seq1  GTAGTAATGCCACAAACTGTGAGATCTTCACTAGAGCCAAGCTGGTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAATGCCACAAACTGTGAGATCTTCACTAGAGCCAAGCTGGTGCCA  400

seq1  GTGACAGTGGCTTGAGTCTCTGGCACTATGACCTCTTCTTGACAAAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGTGGCTTGAGTCTCTGGCACTATGACCTCTTCTTGACAAAGTGC  450

seq1  TCAGCCTCGGGAATTGTGTTATAGCAACAAAAATGCACAAATACACCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCGGGAATTGTGTTATAGCAACAAAAATGCACAAATACACCCAC  500

seq1  TTCCATTTTTCTCAGAGGATGAAAGTTAGTTACTTCATTTTTCTATCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTTCTCAGAGGATGAAAGTTAGTTACTTCATTTTTCTATCCCC  550

seq1  TGACGGCTGGTCACATTTCTGTCAGATATCTACCCAACTGTGGTGCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGGCTGGTCACATTTCTGTCAGATATCTACCCAACTGTGGTGCCCTG  600

seq1  CCTTTGGCCCTAGCAACATGAGATCCGAGGCCTACAGGTCTCACAGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGCCCTAGCAACATGAGATCCGAGGCCTACAGGTCTCACAGTTCA  650

seq1  CCTTTCTCTGTCCTACACTGTTCTTCTCATGAAACTGATCTTTGTCCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCTGTCCTACACTGTTCTTCTCATGAAACTGATCTTTGTCCAAT  700

seq1  TCTTTATAATGCCTAGGCCAGTGATAGGTAGCTCA-TTGATTGACTCTAG  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTTTATAATGCCTAGGCCAGTGATAGGTAGCTCATTTGATTGACTCTAG  750

seq1  GGAGGTAGCTGAGGTGAGGGACTGGCTTGAAAAAAAACACAGAAGACCGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAGCTGAGGTGAGGGACTGGCTTGAAAAAAAACACAGAAGACCGT  800

seq1  TTTACAGCAATGAAAACAGTTTACATCATGTTTGGAGTGGTATTTTCAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGCAATGAAAACAGTTTACATCATGTTTGGAGTGGTATTTTCAAT  850

seq1  GGCTGTATATATTTATCAACTTTTATTGAACTACACTACAATCTGCGCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTATATATTTATCAACTTTTATTGAACTACACTACAATCTGCGCAT  900

seq1  TGTTCAAATTTTTTAAACGTTAGGCAACAAAAAAGTGACAGTTAAAAAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAATTTTTTAAACGTTAGGCAACAAAAAAGTGACAGTTAAAAAAC  950

seq1  ATCATTTCCTAAAACAAGTCTCGCTCAAGGTGTATCATGAGCTGATTTAG  999
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  ATCATTTCCTAAAA-AAGTCTCGCTCAA-GTGTATCATGAGCTGATTTAG  998

seq1  ACAACATTCCTCAGTGG-CACCATGGCGCCCTACAAACACTTTTATCACC  1048
      |||   ||| ||||||| |||||||||| |||   |||||||||||||||
seq2  ACACATTTCTTCAGTGGCCACCATGGCGGCCTTACAACACTTTTATCACC  1048

seq1  AGCTAGC-TTATC-TTCCTATACATACACAGCTAGT-GAACTTA-CTTTT  1094
      ||||||| ||||| ||| ||||| ||||||||| || || |||| |||||
seq2  AGCTAGCTTTATCTTTCTTATAC-TACACAGCTTGTGGACCTTATCTTTT  1097

seq1  ATCTGCCTC-ACCTTAGGGTGACAAGCAAGTCTTCATGGTTGTGTATCCC  1143
      || |||||| |||||||||||||||||| ||| || ||| ||||||||||
seq2  ATTTGCCTCTACCTTAGGGTGACAAGCAGGTC-TCCTGG-TGTGTATCCC  1145

seq1  TAACA  1148
      |||||
seq2  TAACA  1150

seq1: chr14_31404142_31405225
seq2: B6Ng01-124F22.g_68_1142 (reverse)

seq1  GGCCAGGCTTCCCACTTTAGGAACATTTCTCTGTCCTTGGTCCCCTTCTG  50
      ||||| ||||||||||| ||  ||| |||||  | | |||| |||||  |
seq2  GGCCA-GCTTCCCACTTGAG--ACA-TTCTC-ATGCCTGGTTCCCTT-AG  44

seq1  TGTTTTCAGATCTTGCGT-GCGCTGTCTTCCCTCCTAAGGGGATAAAAGG  99
      ||| |||||||  ||||| |||| | ||||| |||||| ||||||||| |
seq2  TGTATTCAGATACTGCGTAGCGC-GGCTTCCTTCCTAA-GGGATAAAA-G  91

seq1  GCTCTGGCCAGGCGGTTAGGATTCAGAAGAGCAAACAAGGTGGCCCAGCC  149
      ||| ||| ||||||| || ||||||||||||||||||||||| ||||| |
seq2  GCTTTGGGCAGGCGG-TAAGATTCAGAAGAGCAAACAAGGTGACCCAG-C  139

seq1  TCTGGTCTCCCACAAGCAGTCGTCATCCAAGGTCATTTGCTACGCAGACA  199
      ||||   | ||||||||||||||||||||| |||||||||||||||||||
seq2  TCTG--TTTCCACAAGCAGTCGTCATCCAA-GTCATTTGCTACGCAGACA  186

seq1  CAGTCGGGGGTCAGGAGGGGTACAGAAGCCCTGTCCAGCTTTGATGGTT-  248
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGTCGGGGGTCAGGAGGGGTACAGAAGCCCTGTCCAGCTTTGATGGTTC  236

seq1  CCAAAGTGGAAGCAGGTG-CCAGAGAGAGCTGAAAG-TTAAGTCCTGGTA  296
      ||||||| |||||||||| ||||||||||||||||| |||||||||||||
seq2  CCAAAGT-GAAGCAGGTGCCCAGAGAGAGCTGAAAGTTTAAGTCCTGGTA  285

seq1  AAGTCAGGCCAAGGGCAGCCATGGGAAGTCC-TGGATCCCTCCCCACACT  345
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGTCAGGCCAAGGGCAGCCATGGGAAGTCCTTGGATCCCTCCCCACACT  335

seq1  GGCAAATCTGAATGCAGCCTCATTTCCTCTATTAG-AACCTCTCTATTAG  394
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGCAAATCTGAATGCAGCCTCATTTCCTCTATTAGAAACCTCTCTATTAG  385

seq1  AAAATGTGGACCTCCGACTCGCATCAGTCCTACATACATTAATGGGGACC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGGACCTCCGACTCGCATCAGTCCTACATACATTAATGGGGACC  435

seq1  TGTTGGGAACTATGGGCACCATGTTAGGATGAACACTATCCTCTGAGACA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGAACTATGGGCACCATGTTAGGATGAACACTATCCTCTGAGACA  485

seq1  AAACAGATAATTGTTTATGTAAGGAGAGATATTATTGCTTATGTTTCTCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATAATTGTTTATGTAAGGAGAGATATTATTGCTTATGTTTCTCT  535

seq1  GGGTCCCCAGCAGTCAGAGACTGTTTAAAGTGTTCAGCACTGTCCCTGGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCCAGCAGTCAGAGACTGTTTAAAGTGTTCAGCACTGTCCCTGGC  585

seq1  ATGAAGACTGATGGTAGGCAGTCTCTGCAGTGCCTGCAAGATGGCATCCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACTGATGGTAGGCAGTCTCTGCAGTGCCTGCAAGATGGCATCCA  635

seq1  CCAGGGGGCGATGTAGCCCAGCCAGGCAGTGGGCGATGTTGCCCTGCCAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGGCGATGTAGCCCAGCCAGGCAGTGGGCGATGTTGCCCTGCCAA  685

seq1  GTGGCCATCTCACAGACCCCTCGGTTTTTCTGTCTGTTGTCTTAGACACG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCATCTCACAGACCCCTCGGTTTTTCTGTCTGTTGTCTTAGACACG  735

seq1  TAGCAGTGCTCCACGGGCTCAGAAGCCAATACTCCTCCACACAATGGGCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTGCTCCACGGGCTCAGAAGCCAATACTCCTCCACACAATGGGCT  785

seq1  GGTCTGGCAGCGCTGACTTGATTTCCAAGGTGTGGCTTTCTGGGCAGCTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGCAGCGCTGACTTGATTTCCAAGGTGTGGCTTTCTGGGCAGCTT  835

seq1  TTCCTAGCTTCACTGGGCAATATGCAGATTCCTACCTCGCCTAGCTTGCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGCTTCACTGGGCAATATGCAGATTCCTACCTCGCCTAGCTTGCT  885

seq1  CTCGGTCCTGATGCACATACATATCAGGAGAGCTTTCAAAATATGATGCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTCCTGATGCACATACATATCAGGAGAGCTTTCAAAATATGATGCC  935

seq1  TGGGCCTCCTCCAAGATGACAGTGTTATTAGACGTGGCTAACCCGGGAAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTCCTCCAAGATGACAGTGTTATTAGACGTGGCTAACCCGGGAAC  985

seq1  TGGGTTCCAGGACTCAGCCAGAACCGCGACCCCTGCTAAGAACTTGGTAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCCAGGACTCAGCCAGAACCGCGACCCCTGCTAAGAACTTGGTAT  1035

seq1  GAAAGATATGTACCTTTTATCAGTATGCACTGCTGAATTC  1084
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATATGTACCTTTTATCAGTATGCACTGCTGAATTC  1075