BAC Information

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BAC

Clone NameB6Ng01-124I16
Chromosome14 (Build37)
Map Location 115,096,363 - 115,216,915
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
Downstream geneGpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124I16.bB6Ng01-124I16.g
ACCDH927422DH927423
length1,1201,104
definitionDH927422|Mus musculus domesticus DNA, BAC clone: B6Ng01-124I16, 5' end.DH927423|Mus musculus domesticus DNA, BAC clone: B6Ng01-124I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,215,787 - 115,216,915)(115,096,363 - 115,097,476)
sequence
gaattctgtgctctttcttattgtctggttttgggtcaaatcttcttcct
gtagcattttgacagattgactctgtatgttagagtctgtctgtagcatc
gcagagcaagagagattcctccagcaggcaggaggaatgccaagaaaaga
ataacaagaagtaggagagaaaaccagcagaacaggtcaggaccaggcat
tcaggacagaaagggagaagggtgtggagtttaaggccagctcgggctat
gtgggggaacatgtctcagacacataacgacaaatgaaaccaaccaatcc
accaaacaaacacgacaataaaacaaaaccaaataatcagaaagcaagaa
accaaagctcaagccaataaaacgatataaataaacatatgttataaaaa
caaagagtaaaatcataatgaatctaatagtaatataccaaatattcgca
gggctcacgtgttacaagaaaggagtatggggagtacatgtctgtcatga
cagaatgtaaaagctgaggatggaaaatggctcagttggtaatgatgttg
ctagctgtcaagcctgactggaacccgagttcaattcccaggactcctgt
ggtagaaagaaggagaaaactgatccattcaagctttcctctggcttgct
tttacataaactggcatgtatgcacttctacactacatatgcgaaatgac
aaatatatggcataaaggtttttttgttttgtttttttttttgtttttgt
ttttttttttatgttttgacgcatgtcagagtgattcccttgccgtccct
tcaggctggtggccacctgtcatctctccttagagtttttcctgggaaag
taattagagtagttttcacttcttcttttccttcatgttctctcaatgac
agtacattaagaaaacctgcaagtcattattttaatggttccttgaatag
ttatggagagttttgtctaagtccttgtcttacaggaaaagatctaaaga
tctaattgaatttgagaatgaaaaagaaatcaaaatcatcttcctttctt
tttttaattggatattttctttatttcaatgtatcccattcctggttccc
tccgtcgaaaacaccctacc
gaattcacagcaactgtgtttacatacacaaggataagccactcaatatt
caagcatgaaggggagagaggctcaggagcatctccggacaactgaacct
ggcagtacctgaatttgggattccatatctcctaactacgagattacaca
tgtatattattacgattttcacagtctcaagtattttgttatagctgcac
aaacccagatgaagaattcagatttataaatatataggagatattgatca
tcatctaaatctctgcttgaaatcccaatgtgggtttttctgtgagattc
ccagctagtcagatagagagattcatatggtactgtgttaaaatttcatc
gtaacttaatgggcaagtttgcccccaaatccagagatgtcaatgttctg
caatgcaggaagcagacctcgagttcctacaacatgtacacacttaggtg
gcacactacagaccataccgagcctgcttctgctggcagctcagaccact
gggagcactgaaaagccttctgacaagcatcatttcctccaggaatttcg
gccaaggctatgctgaggtctgctgctccacggagccactctcttgtact
ttcattaaccagatctgggccactttccaaaagccatgtcttgtgtagtg
attgatcccagacttgaccaacagcttctcacagaggtgccttatgtcac
aatgcctactactgctttctctcagtgccctgacatggagatggctggcc
tggcaagttctgcccatgggcagcactgtcttctgtgaaacatccatggg
gaggtaatgccagaaatcgagaggacactgcttagaggtgaaaggactgt
gtcgtatcctgaggtcaccgctgtccagccttggttgcaggctgcctgag
ccacctggtgtctgttctactctcagcacttcccatcaaagacgcagctc
tgctcagcaagctaggctgaaactcccgctgctcgggtccttggtggttt
atggacaattactgagccggagttagtttatgatgtagcaaggtagctcc
atgaaagacggctgctaaagtgaatgccttcacagggtaataatatttgt
agtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_115215787_115216915
seq2: B6Ng01-124I16.b_45_1164 (reverse)

seq1  GGTAGGGTGTTTCTGGAAGGGAGGGAAACCAGGAAAGGGGATAACATTTG  50
      ||||||||||||  |  | |||||| ||||||| || ||||| ||| |||
seq2  GGTAGGGTGTTTTCG--ACGGAGGG-AACCAGG-AATGGGAT-ACA-TTG  44

seq1  AAATGTAAAGAAAATATCCAATTAAAAAAAAGAAAAGAAAGATGATTTTG  100
      |||  |||||||||||||||||||||||||   |||| ||||||||||||
seq2  AAA--TAAAGAAAATATCCAATTAAAAAAA--GAAAGGAAGATGATTTTG  90

seq1  ATTTCTTTTCATTTCTCAAATTCAATTAGATCTTTTAAGATC-TTTCTGG  149
      |||||||||   |||||||||||||||||||||||  ||||| ||||  |
seq2  ATTTCTTTTTCATTCTCAAATTCAATTAGATCTTT--AGATCTTTTCCTG  138

seq1  TAAGACAAGGACTTAGACAAAAACTCTCCATAACTATTCAAGGAA-CAAT  198
      |||||||||||||||||| |||||||||||||||||||||||||| || |
seq2  TAAGACAAGGACTTAGAC-AAAACTCTCCATAACTATTCAAGGAACCATT  187

seq1  AAAATAATGACTTGCAGGTTTTCTT-ATGTACTGTCATTGAGAGAACATG  247
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAATAATGACTTGCAGGTTTTCTTAATGTACTGTCATTGAGAGAACATG  237

seq1  AAGGAAAAGAAGAAGTGAAAACTACTCTAATTACTTTCCCAGG-AAAACT  296
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGGAAAAGAAGAAGTGAAAACTACTCTAATTACTTTCCCAGGAAAAACT  287

seq1  CTAAGGAGAGATGACAGGTGGCCACCAGCCTGAAGGGACGGCAAGGGAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAGAGATGACAGGTGGCCACCAGCCTGAAGGGACGGCAAGGGAAT  337

seq1  CACTCTGACATGCGTCAAAACATAAAAAAAAAAACAAAAACAAAAAAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGACATGCGTCAAAACATAAAAAAAAAAACAAAAACAAAAAAAAA  387

seq1  AACAAAACAAAAAAACCTTTATGCCATATATTTGTCATTTCGCATATGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAAAAACCTTTATGCCATATATTTGTCATTTCGCATATGTA  437

seq1  GTGTAGAAGTGCATACATGCCAGTTTATGTAAAAGCAAGCCAGAGGAAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAAGTGCATACATGCCAGTTTATGTAAAAGCAAGCCAGAGGAAAG  487

seq1  CTTGAATGGATCAGTTTTCTCCTTCTTTCTACCACAGGAGTCCTGGGAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGGATCAGTTTTCTCCTTCTTTCTACCACAGGAGTCCTGGGAAT  537

seq1  TGAACTCGGGTTCCAGTCAGGCTTGACAGCTAGCAACATCATTACCAACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCGGGTTCCAGTCAGGCTTGACAGCTAGCAACATCATTACCAACT  587

seq1  GAGCCATTTTCCATCCTCAGCTTTTACATTCTGTCATGACAGACATGTAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATTTTCCATCCTCAGCTTTTACATTCTGTCATGACAGACATGTAC  637

seq1  TCCCCATACTCCTTTCTTGTAACACGTGAGCCCTGCGAATATTTGGTATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATACTCCTTTCTTGTAACACGTGAGCCCTGCGAATATTTGGTATA  687

seq1  TTACTATTAGATTCATTATGATTTTACTCTTTGTTTTTATAACATATGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATTAGATTCATTATGATTTTACTCTTTGTTTTTATAACATATGTT  737

seq1  TATTTATATCGTTTTATTGGCTTGAGCTTTGGTTTCTTGCTTTCTGATTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATCGTTTTATTGGCTTGAGCTTTGGTTTCTTGCTTTCTGATTA  787

seq1  TTTGGTTTTGTTTTATTGTCGTGTTTGTTTGGTGGATTGGTTGGTTTCAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTGTTTTATTGTCGTGTTTGTTTGGTGGATTGGTTGGTTTCAT  837

seq1  TTGTCGTTATGTGTCTGAGACATGTTCCCCCACATAGCCCGAGCTGGCCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGTTATGTGTCTGAGACATGTTCCCCCACATAGCCCGAGCTGGCCT  887

seq1  TAAACTCCACACCCTTCTCCCTTTCTGTCCTGAATGCCTGGTCCTGACCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCCACACCCTTCTCCCTTTCTGTCCTGAATGCCTGGTCCTGACCT  937

seq1  GTTCTGCTGGTTTTCTCTCCTACTTCTTGTTATTCTTTTCTTGGCATTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCTGGTTTTCTCTCCTACTTCTTGTTATTCTTTTCTTGGCATTCC  987

seq1  TCCTGCCTGCTGGAGGAATCTCTCTTGCTCTGCGATGCTACAGACAGACT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCTGCTGGAGGAATCTCTCTTGCTCTGCGATGCTACAGACAGACT  1037

seq1  CTAACATACAGAGTCAATCTGTCAAAATGCTACAGGAAGAAGATTTGACC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATACAGAGTCAATCTGTCAAAATGCTACAGGAAGAAGATTTGACC  1087

seq1  CAAAACCAGACAATAAGAAAGAGCACAGAATTC  1129
      |||||||||||||||||||||||||||||||||
seq2  CAAAACCAGACAATAAGAAAGAGCACAGAATTC  1120

seq1: chr14_115096363_115097476
seq2: B6Ng01-124I16.g_67_1170

seq1  GAATTCACAGCAACTGTGTTTACATACACAAGGATAAGCCACTCAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCAACTGTGTTTACATACACAAGGATAAGCCACTCAATATT  50

seq1  CAAGCATGAAGGGGAGAGAGGCTCAGGAGCATCTCCGGACAACTGAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATGAAGGGGAGAGAGGCTCAGGAGCATCTCCGGACAACTGAACCT  100

seq1  GGCAGTACCTGAATTTGGGATTCCATATCTCCTAACTACGAGATTACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTACCTGAATTTGGGATTCCATATCTCCTAACTACGAGATTACACA  150

seq1  TGTATATTATTACGATTTTCACAGTCTCAAGTATTTTGTTATAGCTGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTATTACGATTTTCACAGTCTCAAGTATTTTGTTATAGCTGCAC  200

seq1  AAACCCAGATGAAGAATTCAGATTTATAAATATATAGGAGATATTGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGATGAAGAATTCAGATTTATAAATATATAGGAGATATTGATCA  250

seq1  TCATCTAAATCTCTGCTTGAAATCCCAATGTGGGTTTTTCTGTGAGATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAAATCTCTGCTTGAAATCCCAATGTGGGTTTTTCTGTGAGATTC  300

seq1  CCAGCTAGTCAGATAGAGAGATTCATATGGTACTGTGTTAAAATTTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTAGTCAGATAGAGAGATTCATATGGTACTGTGTTAAAATTTCATC  350

seq1  GTAACTTAATGGGCAAGTTTGCCCCCAAATCCAGAGATGTCAATGTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTAATGGGCAAGTTTGCCCCCAAATCCAGAGATGTCAATGTTCTG  400

seq1  CAATGCAGGAAGCAGACCTCGAGTTCCTACAACATGTACACACTTAGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAGGAAGCAGACCTCGAGTTCCTACAACATGTACACACTTAGGTG  450

seq1  GCACACTACAGACCATACCGAGCCTGCTTCTGCTGGCAGCTCAGACCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTACAGACCATACCGAGCCTGCTTCTGCTGGCAGCTCAGACCACT  500

seq1  GGGAGCACTGAAAAGCCTTCTGACAAGCATCATTTCCTCCAGGAATTTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCACTGAAAAGCCTTCTGACAAGCATCATTTCCTCCAGGAATTTCG  550

seq1  GCCAAGGCTATGCTGAGGTCTGCTGCTCCACGGAGCCACTCTCTTGTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGCTATGCTGAGGTCTGCTGCTCCACGGAGCCACTCTCTTGTACT  600

seq1  TTCATTAACCAGATCTGGGCCACTTTCCAAAAGCCATGTCTTGTGTAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAACCAGATCTGGGCCACTTTCCAAAAGCCATGTCTTGTGTAGTG  650

seq1  ATTGATCCCAGACTTGACCAACAGCTTCTCACAGAGGTGCCTTATGTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCCCAGACTTGACCAACAGCTTCTCACAGAGGTGCCTTATGTCAC  700

seq1  AATGCCTACTACTGCTTTCTCTCAGTGCCCTGACATGGAGATGGCTGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTACTACTGCTTTCTCTCAGTGCCCTGACATGGAGATGGCTGGCC  750

seq1  TGGCAAGTTCTGCCCATGGGCAGCACTGTCTTCTGTGAAACATCCAT-GG  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGCAAGTTCTGCCCATGGGCAGCACTGTCTTCTGTGAAACATCCATGGG  800

seq1  GAGGTAATGCCAGAAATCGAAGAGGACACTGCTTAGAGGTGAAAGGACTG  849
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGGTAATGCCAGAAATCG-AGAGGACACTGCTTAGAGGTGAAAGGACTG  849

seq1  TGTCGTATCCTGAGGTCACCGCTGTCCAGCCTTGGGTTGCAGGGCTGCCT  899
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  TGTCGTATCCTGAGGTCACCGCTGTCCAGCCTT-GGTTGCA-GGCTGCCT  897

seq1  GAAGCCACCTGGTGTCTGTTCTAACTCTCCAGCACTTCCCCATCAAAGAC  949
      | |||||||||||||||||||| ||||| |||||||| ||||||||||| 
seq2  G-AGCCACCTGGTGTCTGTTCT-ACTCT-CAGCACTT-CCCATCAAAGA-  942

seq1  CGCAGCTCCTGCTCAGCAGGCTAGGCTGTAGCTCCCGCTGCTCGGGTCAC  999
      ||||||| |||||||||| ||||||||| | ||||||||||||||||| |
seq2  CGCAGCT-CTGCTCAGCAAGCTAGGCTGAAACTCCCGCTGCTCGGGTC-C  990

seq1  TGGGTGG-TTATGGACAATTACTGAG-CGGAGTTAAGTTATGATGTAGCA  1047
      | ||||| |||||||||||||||||| ||||||||  |||||||||||||
seq2  TTGGTGGTTTATGGACAATTACTGAGCCGGAGTTAGTTTATGATGTAGCA  1040

seq1  AGTAAGCTACATAGAAAGACGGCTGCTAAAAAGTGAATGCACTTCCAAGG  1097
      ||  |||| ||| ||||||||||||||  ||||||||||| ||||  |||
seq2  AGGTAGCTCCAT-GAAAGACGGCTGCT--AAAGTGAATGC-CTTCACAGG  1086

seq1  TTAATAA-ATTTGTAGTT  1114
       |||||| ||||||||||
seq2  GTAATAATATTTGTAGTT  1104